RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 NISCHQ9Y2I1 1504 aa44.57■■■■■ 4.73
TNFAIP2-206ENST00000560428 CCDC180Q9P1Z9 1646 aa39.89■■■■□ 3.98
TNFAIP2-206ENST00000560428 ABCC9O60706 1549 aa39.34■■■■□ 3.89
TNFAIP2-206ENST00000560428 RB1CC1Q8TDY2 1594 aa37.72■■■■□ 3.63
TNFAIP2-206ENST00000560428 NACADO15069 1562 aa37.58■■■■□ 3.61
TNFAIP2-206ENST00000560428 DCAF8L2P0C7V8 631 aa37.27■■■■□ 3.56
TNFAIP2-206ENST00000560428 MYO15BQ96JP2 1530 aa37.26■■■■□ 3.55
TNFAIP2-206ENST00000560428 ZCCHC6Q5VYS8 1495 aaKnown RBP37.05■■■■□ 3.52
TNFAIP2-206ENST00000560428 DCAF1Q9Y4B6 1507 aa36.91■■■■□ 3.5
TNFAIP2-206ENST00000560428 UNC13AQ9UPW8 1703 aa36.85■■■■□ 3.49
TNFAIP2-206ENST00000560428 PABPN1Q86U42 306 aaKnown RBP eCLIP36.63■■■■□ 3.45
TNFAIP2-206ENST00000560428 BICRAQ9NZM4 1560 aa36.58■■■■□ 3.45
TNFAIP2-206ENST00000560428 DNAJC5BQ9UF47 199 aa36.47■■■■□ 3.43
TNFAIP2-206ENST00000560428 SCRIBQ14160 1630 aa36.26■■■■□ 3.4
TNFAIP2-206ENST00000560428 SHROOM4Q9ULL8 1493 aa36.25■■■■□ 3.39
TNFAIP2-206ENST00000560428 EIF4G1Q04637 1599 aaKnown RBP35.65■■■■□ 3.3
TNFAIP2-206ENST00000560428 CC2D2AQ9P2K1 1620 aa35.61■■■■□ 3.29
TNFAIP2-206ENST00000560428 CECR2Q9BXF3 1484 aa35.42■■■■□ 3.26
TNFAIP2-206ENST00000560428 SMARCA4P51532 1647 aa34.69■■■■□ 3.14
TNFAIP2-206ENST00000560428 NCAPD3P42695 1498 aa34.66■■■■□ 3.14
TNFAIP2-206ENST00000560428 ATAD2BQ9ULI0 1458 aa34.59■■■■□ 3.13
TNFAIP2-206ENST00000560428 BAZ1AQ9NRL2 1556 aaPredicted RBP34.59■■■■□ 3.13
TNFAIP2-206ENST00000560428 SMARCA2P51531 1590 aa34.57■■■■□ 3.12
TNFAIP2-206ENST00000560428 HMGXB3Q12766 1538 aa34.48■■■■□ 3.11
TNFAIP2-206ENST00000560428 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
TNFAIP2-206ENST00000560428 MROH2BQ7Z745 1585 aa34.32■■■■□ 3.08
TNFAIP2-206ENST00000560428 BAZ1BQ9UIG0 1483 aaKnown RBP34.29■■■■□ 3.08
TNFAIP2-206ENST00000560428 ERCC6Q03468 1493 aa33.96■■■■□ 3.03
TNFAIP2-206ENST00000560428 WIZO95785 1651 aa33.92■■■■□ 3.02
TNFAIP2-206ENST00000560428 NESP48681 1621 aa33.91■■■■□ 3.02
TNFAIP2-206ENST00000560428 LAMC3Q9Y6N6 1575 aa33.85■■■■□ 3.01
TNFAIP2-206ENST00000560428 CUX2O14529 1486 aa33.82■■■■□ 3.01
TNFAIP2-206ENST00000560428 RSF1Q96T23 1441 aaPredicted RBP33.76■■■□□ 2.99
TNFAIP2-206ENST00000560428 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
TNFAIP2-206ENST00000560428 PDS5BQ9NTI5 1447 aa33.6■■■□□ 2.97
TNFAIP2-206ENST00000560428 TOP2AP11388 1531 aaKnown RBP33.58■■■□□ 2.97
TNFAIP2-206ENST00000560428 THOC2Q8NI27 1593 aaKnown RBP33.56■■■□□ 2.96
TNFAIP2-206ENST00000560428 KIF21AQ7Z4S6 1674 aa33.55■■■□□ 2.96
TNFAIP2-206ENST00000560428 CFTRP13569 1480 aa33.33■■■□□ 2.93
TNFAIP2-206ENST00000560428 MRC2Q9UBG0 1479 aa33.29■■■□□ 2.92
TNFAIP2-206ENST00000560428 DNAJC5Q9H3Z4 198 aa33.25■■■□□ 2.91
TNFAIP2-206ENST00000560428 CEP164Q9UPV0 1460 aa33.24■■■□□ 2.91
TNFAIP2-206ENST00000560428 FANCD2Q9BXW9 1451 aa33.22■■■□□ 2.91
TNFAIP2-206ENST00000560428 WDR62O43379 1518 aa33.21■■■□□ 2.91
TNFAIP2-206ENST00000560428 CCDC88BA6NC98 1476 aa33.13■■■□□ 2.89
TNFAIP2-206ENST00000560428 PRDM2Q13029 1718 aa33.09■■■□□ 2.89
TNFAIP2-206ENST00000560428 URB2Q14146 1524 aaKnown RBP32.92■■■□□ 2.86
TNFAIP2-206ENST00000560428 ABCC8Q09428 1581 aa32.66■■■□□ 2.82
TNFAIP2-206ENST00000560428 TOPBP1Q92547 1522 aa32.64■■■□□ 2.82
TNFAIP2-206ENST00000560428 DNMBPQ6XZF7 1577 aa32.59■■■□□ 2.81
TNFAIP2-206ENST00000560428 IFT140Q96RY7 1462 aa32.56■■■□□ 2.8
TNFAIP2-206ENST00000560428 SUPT5HO00267 1087 aaKnown RBP32.47■■■□□ 2.79
TNFAIP2-206ENST00000560428 ZNF608Q9ULD9 1512 aaPredicted RBP32.41■■■□□ 2.78
TNFAIP2-206ENST00000560428 TARBP1Q13395 1621 aaKnown RBP32.34■■■□□ 2.77
TNFAIP2-206ENST00000560428 POLA1P09884 1462 aaPredicted RBP32.34■■■□□ 2.77
TNFAIP2-206ENST00000560428 EIF4G3O43432 1585 aaKnown RBP32.32■■■□□ 2.76
TNFAIP2-206ENST00000560428 OSCARQ8IYS5 282 aa32.27■■■□□ 2.76
TNFAIP2-206ENST00000560428 CUX1P39880 1505 aa32.22■■■□□ 2.75
TNFAIP2-206ENST00000560428 FGD5Q6ZNL6 1462 aa32.18■■■□□ 2.74
TNFAIP2-206ENST00000560428 SOGA1O94964 1423 aa32.17■■■□□ 2.74
TNFAIP2-206ENST00000560428 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.749e-7■■■■■ 44.5
TNFAIP2-206ENST00000560428 RAD54L2Q9Y4B4 1467 aa32.16■■■□□ 2.74
TNFAIP2-206ENST00000560428 WDR97A6NE52 1622 aa32.13■■■□□ 2.73
TNFAIP2-206ENST00000560428 TDRD9Q8NDG6 1382 aaKnown RBP32.02■■■□□ 2.72
TNFAIP2-206ENST00000560428 CHD1O14646 1710 aa31.98■■■□□ 2.71
TNFAIP2-206ENST00000560428 TRIM41Q8WV44 630 aa31.89■■■□□ 2.7
TNFAIP2-206ENST00000560428 GRIN2BQ13224 1484 aa31.88■■■□□ 2.69
TNFAIP2-206ENST00000560428 SNAPC4Q5SXM2 1469 aa31.88■■■□□ 2.69
TNFAIP2-206ENST00000560428 ABCA10Q8WWZ4 1543 aa31.88■■■□□ 2.69
TNFAIP2-206ENST00000560428 BIVM-ERCC5R4GMW8 1640 aa31.87■■■□□ 2.69
TNFAIP2-206ENST00000560428 TOP2BQ02880 1626 aa31.86■■■□□ 2.69
TNFAIP2-206ENST00000560428 MAGI1Q96QZ7 1491 aaPredicted RBP31.86■■■□□ 2.69
TNFAIP2-206ENST00000560428 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
TNFAIP2-206ENST00000560428 RIMBP3CA6NJZ7 1639 aa31.84■■■□□ 2.69
TNFAIP2-206ENST00000560428 RIMBP3BA6NNM3 1639 aa31.84■■■□□ 2.69
TNFAIP2-206ENST00000560428 RIMBP3Q9UFD9 1639 aa31.84■■■□□ 2.69
TNFAIP2-206ENST00000560428 FBLN2P98095 1184 aa31.82■■■□□ 2.68
TNFAIP2-206ENST00000560428 GAPVD1Q14C86 1478 aa31.81■■■□□ 2.68
TNFAIP2-206ENST00000560428 PBRM1Q86U86 1689 aa31.8■■■□□ 2.68
TNFAIP2-206ENST00000560428 ABCA5Q8WWZ7 1642 aa31.8■■■□□ 2.68
TNFAIP2-206ENST00000560428 SYNJ1O43426 1573 aa31.8■■■□□ 2.68
TNFAIP2-206ENST00000560428 ARHGEF11O15085 1522 aa31.79■■■□□ 2.68
TNFAIP2-206ENST00000560428 SYNJ2O15056 1496 aa31.74■■■□□ 2.67
TNFAIP2-206ENST00000560428 CHMP7Q8WUX9 453 aaPredicted RBP31.7■■■□□ 2.67
TNFAIP2-206ENST00000560428 CLASP1Q7Z460 1538 aa31.65■■■□□ 2.66
TNFAIP2-206ENST00000560428 ADAMTS12P58397 1594 aa31.52■■■□□ 2.64
TNFAIP2-206ENST00000560428 ERICH3Q5RHP9 1530 aa31.5■■■□□ 2.63
TNFAIP2-206ENST00000560428 ARAP1Q96P48 1450 aa31.49■■■□□ 2.63
TNFAIP2-206ENST00000560428 GRIN2AQ12879 1464 aa31.47■■■□□ 2.63
TNFAIP2-206ENST00000560428 FHAD1B1AJZ9 1412 aa31.44■■■□□ 2.62
TNFAIP2-206ENST00000560428 CYB5RLQ6IPT4 315 aa31.44■■■□□ 2.62
TNFAIP2-206ENST00000560428 NUP160Q12769 1436 aa31.36■■■□□ 2.61
TNFAIP2-206ENST00000560428 CEP170Q5SW79 1584 aa31.33■■■□□ 2.61
TNFAIP2-206ENST00000560428 KIF27Q86VH2 1401 aa31.23■■■□□ 2.59
TNFAIP2-206ENST00000560428 SHROOM2Q13796 1616 aa31.2■■■□□ 2.59
TNFAIP2-206ENST00000560428 CUL7Q14999 1698 aa31.14■■■□□ 2.58
TNFAIP2-206ENST00000560428 IGF1RP08069 1367 aa31.13■■■□□ 2.57
TNFAIP2-206ENST00000560428 ERCC6L2Q5T890 1561 aa31.12■■■□□ 2.57
TNFAIP2-206ENST00000560428 RUSC2Q8N2Y8 1516 aa31.08■■■□□ 2.57
TNFAIP2-206ENST00000560428 PRG4Q92954 1404 aaPredicted RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms