RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PTPRKQ15262 1439 aa20.45■□□□□ 0.86
SMAD3-213ENST00000560175 NCOA1Q15788 1441 aa20.44■□□□□ 0.86
SMAD3-213ENST00000560175 UHRF1BP1Q6BDS2 1440 aa20.44■□□□□ 0.86
SMAD3-213ENST00000560175 HSPA2P54652 639 aa20.44■□□□□ 0.86
SMAD3-213ENST00000560175 KIF15Q9NS87 1388 aa20.44■□□□□ 0.86
SMAD3-213ENST00000560175 ADGRL2O95490 1459 aa20.43■□□□□ 0.86
SMAD3-213ENST00000560175 KDM5DQ9BY66 1539 aa20.43■□□□□ 0.86
SMAD3-213ENST00000560175 MROH1Q8NDA8 1641 aa20.42■□□□□ 0.86
SMAD3-213ENST00000560175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMAD3-213ENST00000560175 ERBINQ96RT1 1412 aa20.42■□□□□ 0.86
SMAD3-213ENST00000560175 ANKRD30AQ9BXX3 1397 aa20.41■□□□□ 0.86
SMAD3-213ENST00000560175 RRP7BPQ9NSQ0 103 aa20.4■□□□□ 0.86
SMAD3-213ENST00000560175 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
SMAD3-213ENST00000560175 FAM50AQ14320 339 aaKnown RBP20.39■□□□□ 0.85
SMAD3-213ENST00000560175 PZPP20742 1482 aa20.38■□□□□ 0.85
SMAD3-213ENST00000560175 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
SMAD3-213ENST00000560175 STRCQ7RTU9 1775 aa20.37■□□□□ 0.85
SMAD3-213ENST00000560175 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
SMAD3-213ENST00000560175 DEPDC5O75140 1603 aa20.37■□□□□ 0.85
SMAD3-213ENST00000560175 ABCC3O15438 1527 aa20.37■□□□□ 0.85
SMAD3-213ENST00000560175 PRDM15P57071 1507 aaPredicted RBP20.35■□□□□ 0.85
SMAD3-213ENST00000560175 ZNF142P52746 1687 aaPredicted RBP20.35■□□□□ 0.85
SMAD3-213ENST00000560175 FBXO31Q5XUX0 539 aaPredicted RBP20.33■□□□□ 0.85
SMAD3-213ENST00000560175 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.85
SMAD3-213ENST00000560175 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.84
SMAD3-213ENST00000560175 ROCK1Q13464 1354 aa20.32■□□□□ 0.84
SMAD3-213ENST00000560175 VWDEQ8N2E2 1590 aa20.31■□□□□ 0.84
SMAD3-213ENST00000560175 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
SMAD3-213ENST00000560175 ARHGAP31Q2M1Z3 1444 aa20.3■□□□□ 0.84
SMAD3-213ENST00000560175 CEP152O94986 1710 aa20.3■□□□□ 0.84
SMAD3-213ENST00000560175 CEP170BQ9Y4F5 1589 aaPredicted RBP20.29■□□□□ 0.84
SMAD3-213ENST00000560175 CAMSAP1Q5T5Y3 1602 aa20.28■□□□□ 0.84
SMAD3-213ENST00000560175 DMRT2Q9Y5R5 561 aa20.28■□□□□ 0.84
SMAD3-213ENST00000560175 TNRQ92752 1358 aa20.28■□□□□ 0.84
SMAD3-213ENST00000560175 A2ML1A8K2U0 1454 aa20.28■□□□□ 0.84
SMAD3-213ENST00000560175 SPATA31D1Q6ZQQ2 1576 aa20.28■□□□□ 0.84
SMAD3-213ENST00000560175 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.84
SMAD3-213ENST00000560175 LMTK2Q8IWU2 1503 aa20.27■□□□□ 0.84
SMAD3-213ENST00000560175 PTPRTO14522 1441 aa20.26■□□□□ 0.83
SMAD3-213ENST00000560175 PLA2R1Q13018 1463 aa20.25■□□□□ 0.83
SMAD3-213ENST00000560175 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
SMAD3-213ENST00000560175 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
SMAD3-213ENST00000560175 CFAP65Q6ZU64 1925 aaKnown RBP20.23■□□□□ 0.83
SMAD3-213ENST00000560175 KANK1Q14678 1352 aa20.22■□□□□ 0.83
SMAD3-213ENST00000560175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.834e-8■■□□□ 12.6
SMAD3-213ENST00000560175 PKD2Q13563 968 aa20.2■□□□□ 0.82
SMAD3-213ENST00000560175 UNC13BO14795 1591 aa20.18■□□□□ 0.82
SMAD3-213ENST00000560175 THEMISQ8N1K5 641 aaPredicted RBP20.16■□□□□ 0.82
SMAD3-213ENST00000560175 EFCAB6Q5THR3 1501 aa20.16■□□□□ 0.82
SMAD3-213ENST00000560175 UGGT1Q9NYU2 1555 aa20.16■□□□□ 0.82
SMAD3-213ENST00000560175 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
SMAD3-213ENST00000560175 NOS1P29475 1434 aa20.14■□□□□ 0.81
SMAD3-213ENST00000560175 ITGAEP38570 1179 aa20.14■□□□□ 0.81
SMAD3-213ENST00000560175 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
SMAD3-213ENST00000560175 TET3O43151 1660 aa20.13■□□□□ 0.81
SMAD3-213ENST00000560175 UBR1Q8IWV7 1749 aa20.12■□□□□ 0.81
SMAD3-213ENST00000560175 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
SMAD3-213ENST00000560175 GCC2Q8IWJ2 1684 aa20.1■□□□□ 0.81
SMAD3-213ENST00000560175 IQGAP3Q86VI3 1631 aa20.1■□□□□ 0.81
SMAD3-213ENST00000560175 KDM5AP29375 1690 aaKnown RBP20.1■□□□□ 0.81
SMAD3-213ENST00000560175 NEURL4Q96JN8 1562 aa20.09■□□□□ 0.81
SMAD3-213ENST00000560175 ILDR1Q86SU0 546 aaPredicted RBP20.09■□□□□ 0.81
SMAD3-213ENST00000560175 MED14O60244 1454 aa20.09■□□□□ 0.81
SMAD3-213ENST00000560175 NAIPQ13075 1403 aa20.09■□□□□ 0.81
SMAD3-213ENST00000560175 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
SMAD3-213ENST00000560175 SYNMO15061 1565 aa20.08■□□□□ 0.81
SMAD3-213ENST00000560175 ANKLE2Q86XL3 938 aa20.08■□□□□ 0.81
SMAD3-213ENST00000560175 CERKQ8TCT0 537 aa20.08■□□□□ 0.81
SMAD3-213ENST00000560175 IDI1Q13907 227 aa20.07■□□□□ 0.8
SMAD3-213ENST00000560175 ARHGAP23Q9P227 1491 aa20.06■□□□□ 0.8
SMAD3-213ENST00000560175 PIK3C2BO00750 1634 aa20.05■□□□□ 0.8
SMAD3-213ENST00000560175 FBXO41Q8TF61 875 aa20.05■□□□□ 0.8
SMAD3-213ENST00000560175 SLC52A1Q9NWF4 448 aa20.05■□□□□ 0.8
SMAD3-213ENST00000560175 SLIT1O75093 1534 aa20.05■□□□□ 0.8
SMAD3-213ENST00000560175 NUP155O75694 1391 aa20.05■□□□□ 0.8
SMAD3-213ENST00000560175 E9PCH4 1651 aa20.04■□□□□ 0.8
SMAD3-213ENST00000560175 HFM1A2PYH4 1435 aa20.04■□□□□ 0.8
SMAD3-213ENST00000560175 LTKP29376 864 aa19.99■□□□□ 0.79
SMAD3-213ENST00000560175 NPHP4O75161 1426 aaPredicted RBP19.99■□□□□ 0.79
SMAD3-213ENST00000560175 IQSEC2Q5JU85 1478 aa19.99■□□□□ 0.79
SMAD3-213ENST00000560175 TMEM2Q9UHN6 1383 aa19.98■□□□□ 0.79
SMAD3-213ENST00000560175 ZNF335Q9H4Z2 1342 aaPredicted RBP19.98■□□□□ 0.79
SMAD3-213ENST00000560175 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
SMAD3-213ENST00000560175 SCAF11Q99590 1463 aaKnown RBP19.97■□□□□ 0.79
SMAD3-213ENST00000560175 ADGRB3O60242 1522 aa19.96■□□□□ 0.79
SMAD3-213ENST00000560175 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
SMAD3-213ENST00000560175 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
SMAD3-213ENST00000560175 MYO5BQ9ULV0 1848 aa19.92■□□□□ 0.78
SMAD3-213ENST00000560175 STAG3Q9UJ98 1225 aa19.92■□□□□ 0.78
SMAD3-213ENST00000560175 EID1Q9Y6B2 187 aa19.92■□□□□ 0.78
SMAD3-213ENST00000560175 ZFYVE9O95405 1425 aa19.9■□□□□ 0.78
SMAD3-213ENST00000560175 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
SMAD3-213ENST00000560175 CPS1P31327 1500 aa19.88■□□□□ 0.77
SMAD3-213ENST00000560175 STRCP1A6NGW2 1772 aa19.87■□□□□ 0.77
SMAD3-213ENST00000560175 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
SMAD3-213ENST00000560175 TRPM2O94759 1503 aa19.83■□□□□ 0.77
SMAD3-213ENST00000560175 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.77
SMAD3-213ENST00000560175 TRIM52Q96A61 297 aa19.83■□□□□ 0.77
SMAD3-213ENST00000560175 RIMS2Q9UQ26 1411 aa19.83■□□□□ 0.76
SMAD3-213ENST00000560175 PLEKHG1Q9ULL1 1385 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms