RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 POLR3GLQ9BT43 218 aa31■■■□□ 2.55
RCCD1-208ENST00000557266 KDM2AQ9Y2K7 1162 aa30.98■■■□□ 2.55
RCCD1-208ENST00000557266 DCAF11Q8TEB1 546 aa30.98■■■□□ 2.55
RCCD1-208ENST00000557266 UNC13BO14795 1591 aa30.97■■■□□ 2.55
RCCD1-208ENST00000557266 WDR7Q9Y4E6 1490 aa30.96■■■□□ 2.55
RCCD1-208ENST00000557266 ROCK2O75116 1388 aaKnown RBP30.95■■■□□ 2.55
RCCD1-208ENST00000557266 MYO5CQ9NQX4 1742 aa30.95■■■□□ 2.54
RCCD1-208ENST00000557266 PLXNC1O60486 1568 aa30.94■■■□□ 2.54
RCCD1-208ENST00000557266 IRX6P78412 446 aaPredicted RBP30.93■■■□□ 2.54
RCCD1-208ENST00000557266 PLEKHH2Q8IVE3 1493 aa30.93■■■□□ 2.54
RCCD1-208ENST00000557266 CCDC144AA2RUR9 1427 aa30.91■■■□□ 2.54
RCCD1-208ENST00000557266 ST20-MTHFSA0A0A6YYL1 179 aa30.91■■■□□ 2.54
RCCD1-208ENST00000557266 PLA2R1Q13018 1463 aa30.9■■■□□ 2.54
RCCD1-208ENST00000557266 ASXL2Q76L83 1435 aa30.89■■■□□ 2.54
RCCD1-208ENST00000557266 NPM1P06748 294 aaKnown RBP eCLIP30.88■■■□□ 2.53
RCCD1-208ENST00000557266 PRAG1Q86YV5 1406 aa30.87■■■□□ 2.53
RCCD1-208ENST00000557266 MYT1Q01538 1121 aa30.86■■■□□ 2.53
RCCD1-208ENST00000557266 CNGB1Q14028 1251 aaPredicted RBP30.86■■■□□ 2.53
RCCD1-208ENST00000557266 IQGAP3Q86VI3 1631 aa30.85■■■□□ 2.53
RCCD1-208ENST00000557266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.83■■■□□ 2.539e-7■■□□□ 14.1
RCCD1-208ENST00000557266 TRPM1Q7Z4N2 1603 aa30.83■■■□□ 2.53
RCCD1-208ENST00000557266 DUOX2Q9NRD8 1548 aa30.83■■■□□ 2.53
RCCD1-208ENST00000557266 PLCH2O75038 1416 aa30.83■■■□□ 2.53
RCCD1-208ENST00000557266 ERICH6BQ5W0A0 696 aa30.82■■■□□ 2.52
RCCD1-208ENST00000557266 ABCA9Q8IUA7 1624 aa30.81■■■□□ 2.52
RCCD1-208ENST00000557266 CYB5RLQ6IPT4 315 aa30.8■■■□□ 2.52
RCCD1-208ENST00000557266 MAGI2Q86UL8 1455 aa30.8■■■□□ 2.52
RCCD1-208ENST00000557266 A2MP01023 1474 aa30.8■■■□□ 2.52
RCCD1-208ENST00000557266 ERBINQ96RT1 1412 aa30.78■■■□□ 2.52
RCCD1-208ENST00000557266 E9PCH4 1651 aa30.77■■■□□ 2.52
RCCD1-208ENST00000557266 ARAP3Q8WWN8 1544 aa30.77■■■□□ 2.52
RCCD1-208ENST00000557266 RGL3Q3MIN7 710 aa30.76■■■□□ 2.52
RCCD1-208ENST00000557266 RBM19Q9Y4C8 960 aaKnown RBP30.75■■■□□ 2.51
RCCD1-208ENST00000557266 ABCC1P33527 1531 aa30.75■■■□□ 2.51
RCCD1-208ENST00000557266 GPRASP1Q5JY77 1395 aa30.74■■■□□ 2.51
RCCD1-208ENST00000557266 ATP10AO60312 1499 aa30.73■■■□□ 2.51
RCCD1-208ENST00000557266 EFCAB2Q5VUJ9 269 aa30.73■■■□□ 2.51
RCCD1-208ENST00000557266 PNISRQ8TF01 805 aaKnown RBP30.73■■■□□ 2.51
RCCD1-208ENST00000557266 NBPF1Q3BBV0 1214 aa30.72■■■□□ 2.51
RCCD1-208ENST00000557266 SMG6Q86US8 1419 aaKnown RBP30.72■■■□□ 2.51
RCCD1-208ENST00000557266 PPP4R2Q9NY27 417 aa30.71■■■□□ 2.51
RCCD1-208ENST00000557266 TRAPPC8Q9Y2L5 1435 aa30.7■■■□□ 2.51
RCCD1-208ENST00000557266 KTN1Q86UP2 1357 aaKnown RBP30.69■■■□□ 2.5
RCCD1-208ENST00000557266 LAMC1P11047 1609 aa30.68■■■□□ 2.5
RCCD1-208ENST00000557266 TMC1Q8TDI8 760 aa30.67■■■□□ 2.5
RCCD1-208ENST00000557266 PRDM15P57071 1507 aaPredicted RBP30.66■■■□□ 2.5
RCCD1-208ENST00000557266 MYBBP1AQ9BQG0 1328 aaKnown RBP30.65■■■□□ 2.5
RCCD1-208ENST00000557266 RALBP1Q15311 655 aa30.65■■■□□ 2.5
RCCD1-208ENST00000557266 BRD4O60885 1362 aaPredicted RBP30.64■■■□□ 2.5
RCCD1-208ENST00000557266 EIF2AK4Q9P2K8 1649 aaKnown RBP30.63■■■□□ 2.49
RCCD1-208ENST00000557266 LRPPRCP42704 1394 aaKnown RBP30.63■■■□□ 2.49
RCCD1-208ENST00000557266 NUDCQ9Y266 331 aa30.62■■■□□ 2.49
RCCD1-208ENST00000557266 COL17A1Q9UMD9 1497 aaPredicted RBP30.61■■■□□ 2.49
RCCD1-208ENST00000557266 TESK2Q96S53 571 aa30.58■■■□□ 2.49
RCCD1-208ENST00000557266 FANCAO15360 1455 aa30.58■■■□□ 2.49
RCCD1-208ENST00000557266 ZFYVE16Q7Z3T8 1539 aa30.56■■■□□ 2.48
RCCD1-208ENST00000557266 SPAG9O60271 1321 aaKnown RBP30.56■■■□□ 2.48
RCCD1-208ENST00000557266 RTEL1-TNFRSF6BF6WH68 1400 aa30.56■■■□□ 2.48
RCCD1-208ENST00000557266 PARD3Q8TEW0 1356 aa30.56■■■□□ 2.48
RCCD1-208ENST00000557266 DISP3Q9P2K9 1392 aa30.56■■■□□ 2.48
RCCD1-208ENST00000557266 PER1O15534 1290 aaPredicted RBP30.53■■■□□ 2.48
RCCD1-208ENST00000557266 RNF123Q5XPI4 1314 aa30.53■■■□□ 2.48
RCCD1-208ENST00000557266 AFAP1Q8N556 730 aa30.53■■■□□ 2.48
RCCD1-208ENST00000557266 RNF17Q9BXT8 1623 aaKnown RBP30.52■■■□□ 2.48
RCCD1-208ENST00000557266 SENP3-EIF4A1A0A087X0R7 540 aa30.52■■■□□ 2.48
RCCD1-208ENST00000557266 B4GALNT3Q6L9W6 998 aa30.52■■■□□ 2.48
RCCD1-208ENST00000557266 CD109Q6YHK3 1445 aa30.51■■■□□ 2.48
RCCD1-208ENST00000557266 CFAP74Q9C0B2 1584 aa30.49■■■□□ 2.47
RCCD1-208ENST00000557266 NLRP13Q86W25 1043 aa30.49■■■□□ 2.47
RCCD1-208ENST00000557266 ANP32EQ9BTT0 268 aa30.48■■■□□ 2.47
RCCD1-208ENST00000557266 GLI2P10070 1586 aa30.48■■■□□ 2.47
RCCD1-208ENST00000557266 TRPM2O94759 1503 aa30.47■■■□□ 2.47
RCCD1-208ENST00000557266 MAP3K4Q9Y6R4 1608 aa30.46■■■□□ 2.47
RCCD1-208ENST00000557266 DEPDC5O75140 1603 aa30.45■■■□□ 2.46
RCCD1-208ENST00000557266 ADGRL1O94910 1474 aa30.44■■■□□ 2.46
RCCD1-208ENST00000557266 MADDQ8WXG6 1647 aa30.44■■■□□ 2.46
RCCD1-208ENST00000557266 PTPRTO14522 1441 aa30.43■■■□□ 2.46
RCCD1-208ENST00000557266 DIP2BQ9P265 1576 aa30.43■■■□□ 2.46
RCCD1-208ENST00000557266 WASHC2CQ9Y4E1 1318 aa30.43■■■□□ 2.46
RCCD1-208ENST00000557266 TMF1P82094 1093 aa30.42■■■□□ 2.46
RCCD1-208ENST00000557266 INO80Q9ULG1 1556 aaPredicted RBP30.41■■■□□ 2.46
RCCD1-208ENST00000557266 ATP7AQ04656 1500 aa30.4■■■□□ 2.46
RCCD1-208ENST00000557266 PANK3Q9H999 370 aa30.4■■■□□ 2.46
RCCD1-208ENST00000557266 SPHKAPQ2M3C7 1700 aa30.39■■■□□ 2.46
RCCD1-208ENST00000557266 CLTCL1P53675 1640 aa30.38■■■□□ 2.45
RCCD1-208ENST00000557266 SCAPERQ9BY12 1400 aa30.37■■■□□ 2.45
RCCD1-208ENST00000557266 CEP152O94986 1710 aa30.37■■■□□ 2.45
RCCD1-208ENST00000557266 TET3O43151 1660 aa30.37■■■□□ 2.45
RCCD1-208ENST00000557266 VWDEQ8N2E2 1590 aa30.36■■■□□ 2.45
RCCD1-208ENST00000557266 CC2D1BQ5T0F9 858 aaKnown RBP30.35■■■□□ 2.45
RCCD1-208ENST00000557266 IQGAP1P46940 1657 aa30.35■■■□□ 2.45
RCCD1-208ENST00000557266 NEO1Q92859 1461 aa30.34■■■□□ 2.45
RCCD1-208ENST00000557266 FANCIQ9NVI1 1328 aa30.33■■■□□ 2.45
RCCD1-208ENST00000557266 KANK1Q14678 1352 aa30.3■■■□□ 2.44
RCCD1-208ENST00000557266 STAC3Q96MF2 364 aa30.29■■■□□ 2.44
RCCD1-208ENST00000557266 ZNF518AQ6AHZ1 1483 aa30.29■■■□□ 2.44
RCCD1-208ENST00000557266 MSH5O43196 834 aa30.28■■■□□ 2.44
RCCD1-208ENST00000557266 FAM69CQ0P6D2 419 aa30.28■■■□□ 2.44
RCCD1-208ENST00000557266 SCAF11Q99590 1463 aaKnown RBP30.27■■■□□ 2.44
RCCD1-208ENST00000557266 KIF3BO15066 747 aa30.26■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms