RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 KIF3BO15066 747 aa21.7■■□□□ 1.06
SLIRP-207ENST00000556831 CNTLNQ9NXG0 1405 aa21.7■■□□□ 1.06
SLIRP-207ENST00000556831 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
SLIRP-207ENST00000556831 FAM50AQ14320 339 aaKnown RBP21.68■■□□□ 1.06
SLIRP-207ENST00000556831 ZMYM3Q14202 1370 aa21.68■■□□□ 1.06
SLIRP-207ENST00000556831 MROH1Q8NDA8 1641 aa21.66■■□□□ 1.06
SLIRP-207ENST00000556831 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
SLIRP-207ENST00000556831 RNF17Q9BXT8 1623 aaKnown RBP21.64■■□□□ 1.05
SLIRP-207ENST00000556831 RRP7BPQ9NSQ0 103 aa21.63■■□□□ 1.05
SLIRP-207ENST00000556831 PTPRKQ15262 1439 aa21.63■■□□□ 1.05
SLIRP-207ENST00000556831 KIF15Q9NS87 1388 aa21.62■■□□□ 1.05
SLIRP-207ENST00000556831 DUOX2Q9NRD8 1548 aa21.61■■□□□ 1.05
SLIRP-207ENST00000556831 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
SLIRP-207ENST00000556831 EIF2AK4Q9P2K8 1649 aaKnown RBP21.61■■□□□ 1.05
SLIRP-207ENST00000556831 KDM5DQ9BY66 1539 aa21.6■■□□□ 1.05
SLIRP-207ENST00000556831 UHRF1BP1Q6BDS2 1440 aa21.6■■□□□ 1.05
SLIRP-207ENST00000556831 SETD1BQ9UPS6 1966 aaKnown RBP21.59■■□□□ 1.05
SLIRP-207ENST00000556831 ANKRD30AQ9BXX3 1397 aa21.59■■□□□ 1.05
SLIRP-207ENST00000556831 MYO3AQ8NEV4 1616 aa21.58■■□□□ 1.05
SLIRP-207ENST00000556831 CEP152O94986 1710 aa21.58■■□□□ 1.05
SLIRP-207ENST00000556831 FAM135AQ9P2D6 1515 aa21.58■■□□□ 1.04
SLIRP-207ENST00000556831 STRCQ7RTU9 1775 aa21.58■■□□□ 1.04
SLIRP-207ENST00000556831 ABCC3O15438 1527 aa21.57■■□□□ 1.04
SLIRP-207ENST00000556831 FBXO31Q5XUX0 539 aaPredicted RBP21.57■■□□□ 1.04
SLIRP-207ENST00000556831 NPATQ14207 1427 aa21.56■■□□□ 1.04
SLIRP-207ENST00000556831 MED1Q15648 1581 aaPredicted RBP21.56■■□□□ 1.04
SLIRP-207ENST00000556831 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
SLIRP-207ENST00000556831 ERBINQ96RT1 1412 aa21.55■■□□□ 1.04
SLIRP-207ENST00000556831 ADGRL2O95490 1459 aa21.54■■□□□ 1.04
SLIRP-207ENST00000556831 PTPRTO14522 1441 aa21.54■■□□□ 1.04
SLIRP-207ENST00000556831 WASHC2CQ9Y4E1 1318 aa21.54■■□□□ 1.04
SLIRP-207ENST00000556831 PZPP20742 1482 aa21.52■■□□□ 1.03
SLIRP-207ENST00000556831 DEPDC5O75140 1603 aa21.51■■□□□ 1.03
SLIRP-207ENST00000556831 PRDM15P57071 1507 aaPredicted RBP21.51■■□□□ 1.03
SLIRP-207ENST00000556831 ZNF142P52746 1687 aaPredicted RBP21.51■■□□□ 1.03
SLIRP-207ENST00000556831 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
SLIRP-207ENST00000556831 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
SLIRP-207ENST00000556831 CEP170BQ9Y4F5 1589 aaPredicted RBP21.5■■□□□ 1.03
SLIRP-207ENST00000556831 CAMSAP1Q5T5Y3 1602 aa21.5■■□□□ 1.03
SLIRP-207ENST00000556831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.03
SLIRP-207ENST00000556831 ITGAEP38570 1179 aa21.47■■□□□ 1.03
SLIRP-207ENST00000556831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.47■■□□□ 1.039e-8■■■■□ 20.2
SLIRP-207ENST00000556831 CFAP65Q6ZU64 1925 aaKnown RBP21.47■■□□□ 1.03
SLIRP-207ENST00000556831 KANK1Q14678 1352 aa21.46■■□□□ 1.03
SLIRP-207ENST00000556831 TNRQ92752 1358 aa21.45■■□□□ 1.02
SLIRP-207ENST00000556831 VWDEQ8N2E2 1590 aa21.43■■□□□ 1.02
SLIRP-207ENST00000556831 ERVK-7P63135 1459 aa21.42■■□□□ 1.02
SLIRP-207ENST00000556831 RRBP1Q9P2E9 1410 aaKnown RBP21.42■■□□□ 1.02
SLIRP-207ENST00000556831 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
SLIRP-207ENST00000556831 ANKRD50Q9ULJ7 1429 aa21.41■■□□□ 1.02
SLIRP-207ENST00000556831 ROCK1Q13464 1354 aa21.4■■□□□ 1.02
SLIRP-207ENST00000556831 NCKAP5LQ9HCH0 1330 aa21.4■■□□□ 1.02
SLIRP-207ENST00000556831 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
SLIRP-207ENST00000556831 UBAP1LF5GYI3 381 aa21.36■■□□□ 1.01
SLIRP-207ENST00000556831 LMTK2Q8IWU2 1503 aa21.35■■□□□ 1.01
SLIRP-207ENST00000556831 UNC13BO14795 1591 aa21.35■■□□□ 1.01
SLIRP-207ENST00000556831 ARHGAP31Q2M1Z3 1444 aa21.33■■□□□ 1.01
SLIRP-207ENST00000556831 EFCAB6Q5THR3 1501 aa21.33■■□□□ 1
SLIRP-207ENST00000556831 PLA2R1Q13018 1463 aa21.32■■□□□ 1
SLIRP-207ENST00000556831 NEURL4Q96JN8 1562 aa21.32■■□□□ 1
SLIRP-207ENST00000556831 NLRP1Q9C000 1473 aa21.32■■□□□ 1
SLIRP-207ENST00000556831 SYNMO15061 1565 aa21.31■■□□□ 1
SLIRP-207ENST00000556831 UGGT1Q9NYU2 1555 aa21.31■■□□□ 1
SLIRP-207ENST00000556831 POLR1AO95602 1720 aaPredicted RBP21.29■■□□□ 1
SLIRP-207ENST00000556831 UBR1Q8IWV7 1749 aa21.29■■□□□ 1
SLIRP-207ENST00000556831 PIK3C2BO00750 1634 aa21.28■■□□□ 1
SLIRP-207ENST00000556831 TET3O43151 1660 aa21.27■■□□□ 1
SLIRP-207ENST00000556831 E9PCH4 1651 aa21.25■□□□□ 0.99
SLIRP-207ENST00000556831 IQGAP3Q86VI3 1631 aa21.25■□□□□ 0.99
SLIRP-207ENST00000556831 NOS1P29475 1434 aa21.24■□□□□ 0.99
SLIRP-207ENST00000556831 GCC2Q8IWJ2 1684 aa21.24■□□□□ 0.99
SLIRP-207ENST00000556831 NAIPQ13075 1403 aa21.23■□□□□ 0.99
SLIRP-207ENST00000556831 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
SLIRP-207ENST00000556831 PKD2Q13563 968 aa21.21■□□□□ 0.99
SLIRP-207ENST00000556831 THEMISQ8N1K5 641 aaPredicted RBP21.2■□□□□ 0.98
SLIRP-207ENST00000556831 RPRD2Q5VT52 1461 aaKnown RBP21.2■□□□□ 0.98
SLIRP-207ENST00000556831 HSPA1LP34931 641 aa21.19■□□□□ 0.98
SLIRP-207ENST00000556831 IDI1Q13907 227 aa21.19■□□□□ 0.98
SLIRP-207ENST00000556831 NUP155O75694 1391 aa21.19■□□□□ 0.98
SLIRP-207ENST00000556831 STAG3Q9UJ98 1225 aa21.17■□□□□ 0.98
SLIRP-207ENST00000556831 HFM1A2PYH4 1435 aa21.17■□□□□ 0.98
SLIRP-207ENST00000556831 MYO5BQ9ULV0 1848 aa21.16■□□□□ 0.98
SLIRP-207ENST00000556831 ARHGAP23Q9P227 1491 aa21.16■□□□□ 0.98
SLIRP-207ENST00000556831 LTKP29376 864 aa21.16■□□□□ 0.98
SLIRP-207ENST00000556831 ANKLE2Q86XL3 938 aa21.15■□□□□ 0.98
SLIRP-207ENST00000556831 IQGAP1P46940 1657 aa21.15■□□□□ 0.98
SLIRP-207ENST00000556831 ADGRB3O60242 1522 aa21.14■□□□□ 0.98
SLIRP-207ENST00000556831 SLIT1O75093 1534 aa21.14■□□□□ 0.98
SLIRP-207ENST00000556831 MED14O60244 1454 aa21.14■□□□□ 0.98
SLIRP-207ENST00000556831 NPHP4O75161 1426 aaPredicted RBP21.14■□□□□ 0.98
SLIRP-207ENST00000556831 STRCP1A6NGW2 1772 aa21.11■□□□□ 0.97
SLIRP-207ENST00000556831 SCAF11Q99590 1463 aaKnown RBP21.11■□□□□ 0.97
SLIRP-207ENST00000556831 KDM5AP29375 1690 aaKnown RBP21.1■□□□□ 0.97
SLIRP-207ENST00000556831 TRIM52Q96A61 297 aa21.1■□□□□ 0.97
SLIRP-207ENST00000556831 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
SLIRP-207ENST00000556831 TMEM131LA2VDJ0 1609 aa21.09■□□□□ 0.97
SLIRP-207ENST00000556831 SLC52A1Q9NWF4 448 aa21.09■□□□□ 0.97
SLIRP-207ENST00000556831 SENP3Q9H4L4 574 aaPredicted RBP21.08■□□□□ 0.97
SLIRP-207ENST00000556831 TXNDC2Q86VQ3 553 aa21.07■□□□□ 0.96
SLIRP-207ENST00000556831 SPHKAPQ2M3C7 1700 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms