RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
APEX1-213ENST00000556296 ZNF335Q9H4Z2 1342 aaPredicted RBP19.87■□□□□ 0.77
APEX1-213ENST00000556296 KANK4Q5T7N3 995 aaPredicted RBP19.87■□□□□ 0.77
APEX1-213ENST00000556296 TNRQ92752 1358 aa19.86■□□□□ 0.77
APEX1-213ENST00000556296 UBAP1LF5GYI3 381 aa19.86■□□□□ 0.77
APEX1-213ENST00000556296 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
APEX1-213ENST00000556296 A2ML1A8K2U0 1454 aa19.86■□□□□ 0.77
APEX1-213ENST00000556296 THEMISQ8N1K5 641 aaPredicted RBP19.85■□□□□ 0.77
APEX1-213ENST00000556296 FAM135AQ9P2D6 1515 aa19.85■□□□□ 0.77
APEX1-213ENST00000556296 TCOF1Q13428 1488 aaKnown RBP19.85■□□□□ 0.77
APEX1-213ENST00000556296 ZNF142P52746 1687 aaPredicted RBP19.84■□□□□ 0.77
APEX1-213ENST00000556296 MYO3AQ8NEV4 1616 aa19.84■□□□□ 0.77
APEX1-213ENST00000556296 FBXO31Q5XUX0 539 aaPredicted RBP19.83■□□□□ 0.77
APEX1-213ENST00000556296 ANKLE2Q86XL3 938 aa19.83■□□□□ 0.77
APEX1-213ENST00000556296 MAST1Q9Y2H9 1570 aa19.83■□□□□ 0.76
APEX1-213ENST00000556296 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
APEX1-213ENST00000556296 MIA2Q96PC5 1412 aa19.82■□□□□ 0.76
APEX1-213ENST00000556296 KDM5DQ9BY66 1539 aa19.81■□□□□ 0.76
APEX1-213ENST00000556296 PZPP20742 1482 aa19.8■□□□□ 0.76
APEX1-213ENST00000556296 APLP2Q06481 763 aa19.79■□□□□ 0.76
APEX1-213ENST00000556296 TOM1O60784 492 aa19.77■□□□□ 0.76
APEX1-213ENST00000556296 NLRP1Q9C000 1473 aa19.76■□□□□ 0.75
APEX1-213ENST00000556296 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
APEX1-213ENST00000556296 DNMT1P26358 1616 aaKnown RBP19.73■□□□□ 0.75
APEX1-213ENST00000556296 EIF2AK4Q9P2K8 1649 aaKnown RBP19.73■□□□□ 0.75
APEX1-213ENST00000556296 SOCS7O14512 581 aa19.73■□□□□ 0.75
APEX1-213ENST00000556296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.72■□□□□ 0.75
APEX1-213ENST00000556296 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
APEX1-213ENST00000556296 ILDR2Q71H61 639 aa19.71■□□□□ 0.75
APEX1-213ENST00000556296 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
APEX1-213ENST00000556296 CPS1P31327 1500 aa19.71■□□□□ 0.75
APEX1-213ENST00000556296 PTPN23Q9H3S7 1636 aa19.7■□□□□ 0.74
APEX1-213ENST00000556296 MROH1Q8NDA8 1641 aa19.69■□□□□ 0.74
APEX1-213ENST00000556296 ZC3H13Q5T200 1668 aaKnown RBP19.69■□□□□ 0.74
APEX1-213ENST00000556296 SHANK2Q9UPX8 1470 aa19.68■□□□□ 0.74
APEX1-213ENST00000556296 SPATA31D1Q6ZQQ2 1576 aa19.68■□□□□ 0.74
APEX1-213ENST00000556296 UGGT1Q9NYU2 1555 aa19.68■□□□□ 0.74
APEX1-213ENST00000556296 ABCC5O15440 1437 aa19.68■□□□□ 0.74
APEX1-213ENST00000556296 ABCC3O15438 1527 aa19.67■□□□□ 0.74
APEX1-213ENST00000556296 DUOX2Q9NRD8 1548 aa19.67■□□□□ 0.74
APEX1-213ENST00000556296 PIP4K2BP78356 416 aa19.67■□□□□ 0.74
APEX1-213ENST00000556296 NPHP4O75161 1426 aaPredicted RBP19.67■□□□□ 0.74
APEX1-213ENST00000556296 FGD6Q6ZV73 1430 aa19.65■□□□□ 0.74
APEX1-213ENST00000556296 POLR1AO95602 1720 aaPredicted RBP19.64■□□□□ 0.73
APEX1-213ENST00000556296 CEP152O94986 1710 aa19.63■□□□□ 0.73
APEX1-213ENST00000556296 MED14O60244 1454 aa19.63■□□□□ 0.73
APEX1-213ENST00000556296 DAPK1P53355 1430 aa19.62■□□□□ 0.73
APEX1-213ENST00000556296 KIF15Q9NS87 1388 aa19.62■□□□□ 0.73
APEX1-213ENST00000556296 RRP7BPQ9NSQ0 103 aa19.62■□□□□ 0.73
APEX1-213ENST00000556296 KANK1Q14678 1352 aa19.61■□□□□ 0.73
APEX1-213ENST00000556296 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
APEX1-213ENST00000556296 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
APEX1-213ENST00000556296 CFAP65Q6ZU64 1925 aaKnown RBP19.61■□□□□ 0.73
APEX1-213ENST00000556296 ERBINQ96RT1 1412 aa19.6■□□□□ 0.73
APEX1-213ENST00000556296 HSPA1LP34931 641 aa19.6■□□□□ 0.73
APEX1-213ENST00000556296 STAG3Q9UJ98 1225 aa19.6■□□□□ 0.73
APEX1-213ENST00000556296 PRDM15P57071 1507 aaPredicted RBP19.6■□□□□ 0.73
APEX1-213ENST00000556296 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
APEX1-213ENST00000556296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.733e-8■□□□□ 10
APEX1-213ENST00000556296 DEPDC5O75140 1603 aa19.58■□□□□ 0.73
APEX1-213ENST00000556296 TXNDC2Q86VQ3 553 aa19.57■□□□□ 0.72
APEX1-213ENST00000556296 ARHGAP31Q2M1Z3 1444 aa19.56■□□□□ 0.72
APEX1-213ENST00000556296 ANKRD30AQ9BXX3 1397 aa19.56■□□□□ 0.72
APEX1-213ENST00000556296 VWDEQ8N2E2 1590 aa19.53■□□□□ 0.72
APEX1-213ENST00000556296 SCAF11Q99590 1463 aaKnown RBP19.53■□□□□ 0.72
APEX1-213ENST00000556296 ADGRL2O95490 1459 aa19.52■□□□□ 0.72
APEX1-213ENST00000556296 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
APEX1-213ENST00000556296 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
APEX1-213ENST00000556296 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
APEX1-213ENST00000556296 IQGAP1P46940 1657 aa19.49■□□□□ 0.71
APEX1-213ENST00000556296 LMTK2Q8IWU2 1503 aa19.48■□□□□ 0.71
APEX1-213ENST00000556296 LTKP29376 864 aa19.48■□□□□ 0.71
APEX1-213ENST00000556296 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
APEX1-213ENST00000556296 LRRC7Q96NW7 1537 aa19.46■□□□□ 0.71
APEX1-213ENST00000556296 TMEM2Q9UHN6 1383 aa19.45■□□□□ 0.7
APEX1-213ENST00000556296 SLC52A1Q9NWF4 448 aa19.45■□□□□ 0.7
APEX1-213ENST00000556296 SLIT1O75093 1534 aa19.45■□□□□ 0.7
APEX1-213ENST00000556296 ARHGAP23Q9P227 1491 aa19.44■□□□□ 0.7
APEX1-213ENST00000556296 HDGFP51858 240 aaKnown RBP19.44■□□□□ 0.7
APEX1-213ENST00000556296 IDI1Q13907 227 aa19.44■□□□□ 0.7
APEX1-213ENST00000556296 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
APEX1-213ENST00000556296 BCANQ96GW7 911 aa19.42■□□□□ 0.7
APEX1-213ENST00000556296 SYNMO15061 1565 aa19.41■□□□□ 0.7
APEX1-213ENST00000556296 PIK3C2BO00750 1634 aa19.41■□□□□ 0.7
APEX1-213ENST00000556296 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
APEX1-213ENST00000556296 STRCP1A6NGW2 1772 aa19.41■□□□□ 0.7
APEX1-213ENST00000556296 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
APEX1-213ENST00000556296 KDM5AP29375 1690 aaKnown RBP19.4■□□□□ 0.7
APEX1-213ENST00000556296 KCNA6P17658 529 aa19.4■□□□□ 0.7
APEX1-213ENST00000556296 ANKRD50Q9ULJ7 1429 aa19.4■□□□□ 0.7
APEX1-213ENST00000556296 NOS1P29475 1434 aa19.38■□□□□ 0.69
APEX1-213ENST00000556296 MED1Q15648 1581 aaPredicted RBP19.38■□□□□ 0.69
APEX1-213ENST00000556296 PROSER2Q86WR7 435 aaPredicted RBP19.36■□□□□ 0.69
APEX1-213ENST00000556296 SLC26A8Q96RN1 970 aa19.35■□□□□ 0.69
APEX1-213ENST00000556296 TET3O43151 1660 aa19.34■□□□□ 0.69
APEX1-213ENST00000556296 PPP1R15AO75807 674 aaPredicted RBP19.34■□□□□ 0.69
APEX1-213ENST00000556296 UNC13BO14795 1591 aa19.34■□□□□ 0.69
APEX1-213ENST00000556296 RPRD2Q5VT52 1461 aaKnown RBP19.34■□□□□ 0.69
APEX1-213ENST00000556296 ROCK1Q13464 1354 aa19.33■□□□□ 0.69
APEX1-213ENST00000556296 TMEM94Q12767 1356 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms