RNA–Protein interactions for RNA: ENST00000552297.5

MYL6-221, Transcript of myosin light chain 6, human

TSL 3

Gene MYL6, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MYL6-221	ENST00000552297	VWDE	Q8N2E2	1590 aa		10.73	□□□□□ -0.69
MYL6-221	ENST00000552297	DEPDC5	O75140	1603 aa		10.73	□□□□□ -0.69
MYL6-221	ENST00000552297	RNF17	Q9BXT8	1623 aa	Known RBP	10.73	□□□□□ -0.69
MYL6-221	ENST00000552297	STRCP1	A6NGW2	1772 aa		10.72	□□□□□ -0.69
MYL6-221	ENST00000552297	IQGAP1	P46940	1657 aa		10.72	□□□□□ -0.69
MYL6-221	ENST00000552297	SPAG9	O60271	1321 aa	Known RBP	10.71	□□□□□ -0.69
MYL6-221	ENST00000552297	FAM135A	Q9P2D6	1515 aa		10.71	□□□□□ -0.69
MYL6-221	ENST00000552297	PLEKHH2	Q8IVE3	1493 aa		10.7	□□□□□ -0.7
MYL6-221	ENST00000552297	CASKIN1	Q8WXD9	1431 aa		10.69	□□□□□ -0.7
MYL6-221	ENST00000552297	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.68	□□□□□ -0.7
MYL6-221	ENST00000552297	KIAA1107	Q9UPP5	1409 aa		10.68	□□□□□ -0.7
MYL6-221	ENST00000552297	MED14	O60244	1454 aa		10.68	□□□□□ -0.7
MYL6-221	ENST00000552297	XIRP1	Q702N8	1843 aa	Known RBP	10.68	□□□□□ -0.7
MYL6-221	ENST00000552297	KDM5D	Q9BY66	1539 aa		10.67	□□□□□ -0.7
MYL6-221	ENST00000552297	PZP	P20742	1482 aa		10.67	□□□□□ -0.7
MYL6-221	ENST00000552297	FYCO1	Q9BQS8	1478 aa		10.67	□□□□□ -0.7
MYL6-221	ENST00000552297	ZC3H13	Q5T200	1668 aa	Known RBP	10.66	□□□□□ -0.7
MYL6-221	ENST00000552297	UGGT1	Q9NYU2	1555 aa		10.66	□□□□□ -0.7
MYL6-221	ENST00000552297	UBTF	P17480	764 aa	Known RBP	10.66	□□□□□ -0.7
MYL6-221	ENST00000552297	GGT6	Q6P531	493 aa		10.66	□□□□□ -0.7
MYL6-221	ENST00000552297	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.66	□□□□□ -0.7
MYL6-221	ENST00000552297	TNR	Q92752	1358 aa		10.65	□□□□□ -0.7
MYL6-221	ENST00000552297	NLRP1	Q9C000	1473 aa		10.65	□□□□□ -0.7
MYL6-221	ENST00000552297	NPHP4	O75161	1426 aa	Predicted RBP	10.65	□□□□□ -0.7
MYL6-221	ENST00000552297	LRRC7	Q96NW7	1537 aa		10.64	□□□□□ -0.71
MYL6-221	ENST00000552297	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
MYL6-221	ENST00000552297	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.64	□□□□□ -0.71	1e-7	■■■■■ 28.4
MYL6-221	ENST00000552297	NPM3	O75607	178 aa	Known RBP	10.63	□□□□□ -0.71
MYL6-221	ENST00000552297	SETD1A	O15047	1707 aa	Known RBP	10.63	□□□□□ -0.71
MYL6-221	ENST00000552297	ANKLE2	Q86XL3	938 aa		10.62	□□□□□ -0.71
MYL6-221	ENST00000552297	TIAM1	Q13009	1591 aa		10.61	□□□□□ -0.71
MYL6-221	ENST00000552297	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.61	□□□□□ -0.71
MYL6-221	ENST00000552297	UBR1	Q8IWV7	1749 aa		10.61	□□□□□ -0.71
MYL6-221	ENST00000552297	CFAP65	Q6ZU64	1925 aa	Known RBP	10.6	□□□□□ -0.71
MYL6-221	ENST00000552297	RNF216	Q9NWF9	866 aa	Predicted RBP	10.6	□□□□□ -0.71
MYL6-221	ENST00000552297	RGS17	Q9UGC6	210 aa	Predicted RBP	10.6	□□□□□ -0.71
MYL6-221	ENST00000552297	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.59	□□□□□ -0.71
MYL6-221	ENST00000552297	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.59	□□□□□ -0.71
MYL6-221	ENST00000552297	EHMT2	Q96KQ7	1210 aa		10.59	□□□□□ -0.71
MYL6-221	ENST00000552297	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.59	□□□□□ -0.71
MYL6-221	ENST00000552297	DHX29	Q7Z478	1369 aa	Known RBP	10.59	□□□□□ -0.71
MYL6-221	ENST00000552297	CCNB3	Q8WWL7	1395 aa		10.59	□□□□□ -0.71
MYL6-221	ENST00000552297	MBD5	Q9P267	1494 aa		10.59	□□□□□ -0.71
MYL6-221	ENST00000552297	MIA2	Q96PC5	1412 aa		10.58	□□□□□ -0.72
MYL6-221	ENST00000552297	CEP152	O94986	1710 aa		10.56	□□□□□ -0.72
MYL6-221	ENST00000552297	EHBP1L1	Q8N3D4	1523 aa		10.56	□□□□□ -0.72
MYL6-221	ENST00000552297	ROBO1	Q9Y6N7	1651 aa		10.56	□□□□□ -0.72
MYL6-221	ENST00000552297	CCDC141	Q6ZP82	1450 aa		10.55	□□□□□ -0.72
MYL6-221	ENST00000552297	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.55	□□□□□ -0.72
MYL6-221	ENST00000552297	KIF3B	O15066	747 aa		10.54	□□□□□ -0.72
MYL6-221	ENST00000552297	SCAF11	Q99590	1463 aa	Known RBP	10.54	□□□□□ -0.72
MYL6-221	ENST00000552297	WASHC2C	Q9Y4E1	1318 aa		10.54	□□□□□ -0.72
MYL6-221	ENST00000552297	MTUS2	Q5JR59	1369 aa		10.53	□□□□□ -0.72
MYL6-221	ENST00000552297	HOXD11	P31277	338 aa	Predicted RBP	10.53	□□□□□ -0.72
MYL6-221	ENST00000552297	ERVK-7	P63135	1459 aa		10.53	□□□□□ -0.72
MYL6-221	ENST00000552297	ABCC3	O15438	1527 aa		10.53	□□□□□ -0.72
MYL6-221	ENST00000552297	FAM135B	Q49AJ0	1406 aa		10.52	□□□□□ -0.73
MYL6-221	ENST00000552297	POTEA	Q6S8J7	498 aa		10.52	□□□□□ -0.73
MYL6-221	ENST00000552297	PHLPP1	O60346	1717 aa		10.52	□□□□□ -0.73
MYL6-221	ENST00000552297	SLIT1	O75093	1534 aa		10.52	□□□□□ -0.73
MYL6-221	ENST00000552297	ZNF644	Q9H582	1327 aa	Predicted RBP	10.52	□□□□□ -0.73
MYL6-221	ENST00000552297	ARHGEF5	Q12774	1597 aa		10.52	□□□□□ -0.73
MYL6-221	ENST00000552297	MROH1	Q8NDA8	1641 aa		10.51	□□□□□ -0.73
MYL6-221	ENST00000552297	CAMSAP2	Q08AD1	1489 aa		10.51	□□□□□ -0.73
MYL6-221	ENST00000552297	LRRC9	Q6ZRR7	1453 aa		10.5	□□□□□ -0.73
MYL6-221	ENST00000552297	ARHGAP23	Q9P227	1491 aa		10.5	□□□□□ -0.73
MYL6-221	ENST00000552297	KDM5A	P29375	1690 aa	Known RBP	10.5	□□□□□ -0.73
MYL6-221	ENST00000552297	NCOA2	Q15596	1464 aa		10.49	□□□□□ -0.73
MYL6-221	ENST00000552297	MAP3K1	Q13233	1512 aa		10.49	□□□□□ -0.73
MYL6-221	ENST00000552297	CEP162	Q5TB80	1403 aa		10.49	□□□□□ -0.73
MYL6-221	ENST00000552297	MAST1	Q9Y2H9	1570 aa		10.48	□□□□□ -0.73
MYL6-221	ENST00000552297	PIK3C2B	O00750	1634 aa		10.47	□□□□□ -0.73
MYL6-221	ENST00000552297	NWD1	Q149M9	1564 aa		10.47	□□□□□ -0.73
MYL6-221	ENST00000552297	COL16A1	Q07092	1604 aa	Predicted RBP	10.46	□□□□□ -0.74
MYL6-221	ENST00000552297	RSPH4A	Q5TD94	716 aa		10.45	□□□□□ -0.74
MYL6-221	ENST00000552297	PRDM15	P57071	1507 aa	Predicted RBP	10.44	□□□□□ -0.74
MYL6-221	ENST00000552297	NKTR	P30414	1462 aa	Known RBP	10.44	□□□□□ -0.74
MYL6-221	ENST00000552297	SHPRH	Q149N8	1683 aa		10.44	□□□□□ -0.74
MYL6-221	ENST00000552297	TMEM94	Q12767	1356 aa		10.43	□□□□□ -0.74
MYL6-221	ENST00000552297	CHD2	O14647	1828 aa	Known RBP	10.42	□□□□□ -0.74
MYL6-221	ENST00000552297	TET3	O43151	1660 aa		10.42	□□□□□ -0.74
MYL6-221	ENST00000552297	LTK	P29376	864 aa		10.42	□□□□□ -0.74
MYL6-221	ENST00000552297	ARHGAP31	Q2M1Z3	1444 aa		10.41	□□□□□ -0.74
MYL6-221	ENST00000552297	JCAD	Q9P266	1359 aa		10.41	□□□□□ -0.74
MYL6-221	ENST00000552297	TXNDC2	Q86VQ3	553 aa		10.41	□□□□□ -0.74
MYL6-221	ENST00000552297	EFCAB6	Q5THR3	1501 aa		10.41	□□□□□ -0.74
MYL6-221	ENST00000552297	CROCC2	H7BZ55	1655 aa		10.41	□□□□□ -0.74
MYL6-221	ENST00000552297	MYO5B	Q9ULV0	1848 aa		10.4	□□□□□ -0.74
MYL6-221	ENST00000552297	DUOX2	Q9NRD8	1548 aa		10.4	□□□□□ -0.74
MYL6-221	ENST00000552297	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
MYL6-221	ENST00000552297	EID1	Q9Y6B2	187 aa		10.4	□□□□□ -0.74
MYL6-221	ENST00000552297	LRP6	O75581	1613 aa		10.4	□□□□□ -0.75
MYL6-221	ENST00000552297	TMEM2	Q9UHN6	1383 aa		10.39	□□□□□ -0.75
MYL6-221	ENST00000552297	TSPY4	P0CV99	314 aa		10.39	□□□□□ -0.75
MYL6-221	ENST00000552297	TSPY10	P0CW01	314 aa		10.39	□□□□□ -0.75
MYL6-221	ENST00000552297	FGD6	Q6ZV73	1430 aa		10.39	□□□□□ -0.75
MYL6-221	ENST00000552297	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.38	□□□□□ -0.75
MYL6-221	ENST00000552297	KCNA6	P17658	529 aa		10.38	□□□□□ -0.75
MYL6-221	ENST00000552297	POTED	Q86YR6	584 aa		10.38	□□□□□ -0.75
MYL6-221	ENST00000552297	MSH6	P52701	1360 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms