RNA–Protein interactions for RNA: ENST00000552294.1

CTDSP2-208, Transcript of CTD small phosphatase 2, humanhuman

TSL 5

Gene CTDSP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-208ENST00000552294 A2ML1A8K2U0 1454 aa11.23□□□□□ -0.61
CTDSP2-208ENST00000552294 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
CTDSP2-208ENST00000552294 VWDEQ8N2E2 1590 aa11.23□□□□□ -0.61
CTDSP2-208ENST00000552294 SHANK2Q9UPX8 1470 aa11.22□□□□□ -0.61
CTDSP2-208ENST00000552294 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
CTDSP2-208ENST00000552294 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.62
CTDSP2-208ENST00000552294 FYCO1Q9BQS8 1478 aa11.2□□□□□ -0.62
CTDSP2-208ENST00000552294 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
CTDSP2-208ENST00000552294 TNRQ92752 1358 aa11.19□□□□□ -0.62
CTDSP2-208ENST00000552294 CCNB3Q8WWL7 1395 aa11.18□□□□□ -0.62
CTDSP2-208ENST00000552294 KIF3BO15066 747 aa11.18□□□□□ -0.62
CTDSP2-208ENST00000552294 DHX29Q7Z478 1369 aaKnown RBP11.17□□□□□ -0.62
CTDSP2-208ENST00000552294 ADGBQ8N7X0 1667 aa11.17□□□□□ -0.62
CTDSP2-208ENST00000552294 LRRC7Q96NW7 1537 aa11.15□□□□□ -0.62
CTDSP2-208ENST00000552294 PZPP20742 1482 aa11.14□□□□□ -0.63
CTDSP2-208ENST00000552294 NPHP4O75161 1426 aaPredicted RBP11.14□□□□□ -0.63
CTDSP2-208ENST00000552294 MIA2Q96PC5 1412 aa11.14□□□□□ -0.63
CTDSP2-208ENST00000552294 POLR1AO95602 1720 aaPredicted RBP11.14□□□□□ -0.63
CTDSP2-208ENST00000552294 CPS1P31327 1500 aa11.14□□□□□ -0.63
CTDSP2-208ENST00000552294 TOM1O60784 492 aa11.13□□□□□ -0.63
CTDSP2-208ENST00000552294 MED14O60244 1454 aa11.12□□□□□ -0.63
CTDSP2-208ENST00000552294 PLEKHH2Q8IVE3 1493 aa11.12□□□□□ -0.63
CTDSP2-208ENST00000552294 LTKP29376 864 aa11.12□□□□□ -0.63
CTDSP2-208ENST00000552294 ANKLE2Q86XL3 938 aa11.12□□□□□ -0.63
CTDSP2-208ENST00000552294 MTUS2Q5JR59 1369 aa11.12□□□□□ -0.63
CTDSP2-208ENST00000552294 RTEL1-TNFRSF6BF6WH68 1400 aa11.11□□□□□ -0.63
CTDSP2-208ENST00000552294 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
CTDSP2-208ENST00000552294 POTEAQ6S8J7 498 aa11.11□□□□□ -0.63
CTDSP2-208ENST00000552294 RBM33Q96EV2 1170 aaKnown RBP11.11□□□□□ -0.63
CTDSP2-208ENST00000552294 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
CTDSP2-208ENST00000552294 WASHC2CQ9Y4E1 1318 aa11.1□□□□□ -0.63
CTDSP2-208ENST00000552294 CAMSAP2Q08AD1 1489 aa11.1□□□□□ -0.63
CTDSP2-208ENST00000552294 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
CTDSP2-208ENST00000552294 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
CTDSP2-208ENST00000552294 ZC3H13Q5T200 1668 aaKnown RBP11.08□□□□□ -0.64
CTDSP2-208ENST00000552294 THEMISQ8N1K5 641 aaPredicted RBP11.08□□□□□ -0.64
CTDSP2-208ENST00000552294 ABCC3O15438 1527 aa11.08□□□□□ -0.64
CTDSP2-208ENST00000552294 CEP162Q5TB80 1403 aa11.08□□□□□ -0.64
CTDSP2-208ENST00000552294 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
CTDSP2-208ENST00000552294 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
CTDSP2-208ENST00000552294 DEPDC5O75140 1603 aa11.07□□□□□ -0.64
CTDSP2-208ENST00000552294 XIRP1Q702N8 1843 aaKnown RBP11.07□□□□□ -0.64
CTDSP2-208ENST00000552294 ERVK-7P63135 1459 aa11.06□□□□□ -0.64
CTDSP2-208ENST00000552294 NLRP1Q9C000 1473 aa11.06□□□□□ -0.64
CTDSP2-208ENST00000552294 EHBP1L1Q8N3D4 1523 aa11.05□□□□□ -0.64
CTDSP2-208ENST00000552294 FAM135AQ9P2D6 1515 aa11.04□□□□□ -0.64
CTDSP2-208ENST00000552294 RNF17Q9BXT8 1623 aaKnown RBP11.03□□□□□ -0.64
CTDSP2-208ENST00000552294 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
CTDSP2-208ENST00000552294 UBR1Q8IWV7 1749 aa11.03□□□□□ -0.64
CTDSP2-208ENST00000552294 ARHGAP23Q9P227 1491 aa11.01□□□□□ -0.65
CTDSP2-208ENST00000552294 SRCAPQ6ZRS2 3230 aa11.01□□□□□ -0.65
CTDSP2-208ENST00000552294 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
CTDSP2-208ENST00000552294 CEP152O94986 1710 aa11.01□□□□□ -0.65
CTDSP2-208ENST00000552294 ARHGEF5Q12774 1597 aa11□□□□□ -0.65
CTDSP2-208ENST00000552294 TXNDC2Q86VQ3 553 aa11□□□□□ -0.65
CTDSP2-208ENST00000552294 SCAF11Q99590 1463 aaKnown RBP11□□□□□ -0.65
CTDSP2-208ENST00000552294 SLC26A8Q96RN1 970 aa10.99□□□□□ -0.65
CTDSP2-208ENST00000552294 TMEM94Q12767 1356 aa10.99□□□□□ -0.65
CTDSP2-208ENST00000552294 MAP3K1Q13233 1512 aa10.99□□□□□ -0.65
CTDSP2-208ENST00000552294 SYNMO15061 1565 aa10.99□□□□□ -0.65
CTDSP2-208ENST00000552294 CFAP65Q6ZU64 1925 aaKnown RBP10.98□□□□□ -0.65
CTDSP2-208ENST00000552294 SLIT1O75093 1534 aa10.98□□□□□ -0.65
CTDSP2-208ENST00000552294 PIK3C2BO00750 1634 aa10.96□□□□□ -0.65
CTDSP2-208ENST00000552294 FAM135BQ49AJ0 1406 aa10.96□□□□□ -0.65
CTDSP2-208ENST00000552294 TET3O43151 1660 aa10.95□□□□□ -0.66
CTDSP2-208ENST00000552294 MAST1Q9Y2H9 1570 aa10.95□□□□□ -0.66
CTDSP2-208ENST00000552294 LOC105371045A0A1W2PR82 267 aa10.95□□□□□ -0.66
CTDSP2-208ENST00000552294 TSPY4P0CV99 314 aa10.95□□□□□ -0.66
CTDSP2-208ENST00000552294 TSPY10P0CW01 314 aa10.95□□□□□ -0.66
CTDSP2-208ENST00000552294 IDI1Q13907 227 aa10.95□□□□□ -0.66
CTDSP2-208ENST00000552294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.66
CTDSP2-208ENST00000552294 ROBO1Q9Y6N7 1651 aa10.95□□□□□ -0.66
CTDSP2-208ENST00000552294 LRRC9Q6ZRR7 1453 aa10.94□□□□□ -0.66
CTDSP2-208ENST00000552294 TMEM2Q9UHN6 1383 aa10.94□□□□□ -0.66
CTDSP2-208ENST00000552294 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
CTDSP2-208ENST00000552294 LRP6O75581 1613 aa10.94□□□□□ -0.66
CTDSP2-208ENST00000552294 ABCC5O15440 1437 aa10.92□□□□□ -0.66
CTDSP2-208ENST00000552294 RSPH4AQ5TD94 716 aa10.92□□□□□ -0.66
CTDSP2-208ENST00000552294 KCNA6P17658 529 aa10.91□□□□□ -0.66
CTDSP2-208ENST00000552294 PROSER2Q86WR7 435 aaPredicted RBP10.91□□□□□ -0.66
CTDSP2-208ENST00000552294 ARHGAP31Q2M1Z3 1444 aa10.91□□□□□ -0.66
CTDSP2-208ENST00000552294 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
CTDSP2-208ENST00000552294 KIF15Q9NS87 1388 aa10.9□□□□□ -0.66
CTDSP2-208ENST00000552294 PRDM15P57071 1507 aaPredicted RBP10.9□□□□□ -0.66
CTDSP2-208ENST00000552294 CHIC2Q9UKJ5 165 aa10.89□□□□□ -0.67
CTDSP2-208ENST00000552294 MYOM3Q5VTT5 1437 aa10.89□□□□□ -0.67
CTDSP2-208ENST00000552294 DUOX2Q9NRD8 1548 aa10.89□□□□□ -0.67
CTDSP2-208ENST00000552294 UPF1Q92900 1129 aaKnown RBP eCLIP10.88□□□□□ -0.67
CTDSP2-208ENST00000552294 SLAIN2Q9P270 581 aa10.88□□□□□ -0.67
CTDSP2-208ENST00000552294 NUTM2DQ5VT03 806 aaPredicted RBP10.87□□□□□ -0.67
CTDSP2-208ENST00000552294 EFCAB6Q5THR3 1501 aa10.87□□□□□ -0.67
CTDSP2-208ENST00000552294 COL16A1Q07092 1604 aaPredicted RBP10.87□□□□□ -0.67
CTDSP2-208ENST00000552294 NWD1Q149M9 1564 aa10.86□□□□□ -0.67
CTDSP2-208ENST00000552294 NOS1P29475 1434 aa10.86□□□□□ -0.67
CTDSP2-208ENST00000552294 PIAS4Q8N2W9 510 aaPredicted RBP10.86□□□□□ -0.67
CTDSP2-208ENST00000552294 TRIM52Q96A61 297 aa10.86□□□□□ -0.67
CTDSP2-208ENST00000552294 EID1Q9Y6B2 187 aa10.86□□□□□ -0.67
CTDSP2-208ENST00000552294 VPS8Q8N3P4 1428 aa10.85□□□□□ -0.67
CTDSP2-208ENST00000552294 ZFYVE9O95405 1425 aa10.84□□□□□ -0.67
CTDSP2-208ENST00000552294 PHLPP1O60346 1717 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 303.3 ms