RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 WASHC2CQ9Y4E1 1318 aa17.81■□□□□ 0.44
PFDN5-212ENST00000550880 RSPH4AQ5TD94 716 aa17.81■□□□□ 0.44
PFDN5-212ENST00000550880 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
PFDN5-212ENST00000550880 HSPA1LP34931 641 aa17.8■□□□□ 0.44
PFDN5-212ENST00000550880 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
PFDN5-212ENST00000550880 THEMISQ8N1K5 641 aaPredicted RBP17.8■□□□□ 0.44
PFDN5-212ENST00000550880 CPS1P31327 1500 aa17.8■□□□□ 0.44
PFDN5-212ENST00000550880 MBD5Q9P267 1494 aa17.8■□□□□ 0.44
PFDN5-212ENST00000550880 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.44
PFDN5-212ENST00000550880 SHANK2Q9UPX8 1470 aa17.77■□□□□ 0.44
PFDN5-212ENST00000550880 TIAM1Q13009 1591 aa17.77■□□□□ 0.44
PFDN5-212ENST00000550880 PZPP20742 1482 aa17.76■□□□□ 0.43
PFDN5-212ENST00000550880 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
PFDN5-212ENST00000550880 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
PFDN5-212ENST00000550880 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
PFDN5-212ENST00000550880 TSPY4P0CV99 314 aa17.75■□□□□ 0.43
PFDN5-212ENST00000550880 TSPY10P0CW01 314 aa17.75■□□□□ 0.43
PFDN5-212ENST00000550880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.75■□□□□ 0.43
PFDN5-212ENST00000550880 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
PFDN5-212ENST00000550880 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
PFDN5-212ENST00000550880 POLR1AO95602 1720 aaPredicted RBP17.73■□□□□ 0.43
PFDN5-212ENST00000550880 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
PFDN5-212ENST00000550880 NLRP1Q9C000 1473 aa17.73■□□□□ 0.43
PFDN5-212ENST00000550880 NPHP4O75161 1426 aaPredicted RBP17.71■□□□□ 0.43
PFDN5-212ENST00000550880 NEURL4Q96JN8 1562 aa17.7■□□□□ 0.42
PFDN5-212ENST00000550880 UGGT1Q9NYU2 1555 aa17.7■□□□□ 0.42
PFDN5-212ENST00000550880 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
PFDN5-212ENST00000550880 CAMSAP2Q08AD1 1489 aa17.69■□□□□ 0.42
PFDN5-212ENST00000550880 MED14O60244 1454 aa17.68■□□□□ 0.42
PFDN5-212ENST00000550880 NCOA2Q15596 1464 aa17.67■□□□□ 0.42
PFDN5-212ENST00000550880 VWDEQ8N2E2 1590 aa17.66■□□□□ 0.42
PFDN5-212ENST00000550880 DEPDC5O75140 1603 aa17.65■□□□□ 0.42
PFDN5-212ENST00000550880 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
PFDN5-212ENST00000550880 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
PFDN5-212ENST00000550880 IQGAP1P46940 1657 aa17.61■□□□□ 0.41
PFDN5-212ENST00000550880 ABCC3O15438 1527 aa17.57■□□□□ 0.4
PFDN5-212ENST00000550880 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
PFDN5-212ENST00000550880 ZC3H13Q5T200 1668 aaKnown RBP17.57■□□□□ 0.4
PFDN5-212ENST00000550880 ERVK-7P63135 1459 aa17.56■□□□□ 0.4
PFDN5-212ENST00000550880 RNF17Q9BXT8 1623 aaKnown RBP17.55■□□□□ 0.4
PFDN5-212ENST00000550880 TXNDC2Q86VQ3 553 aa17.55■□□□□ 0.4
PFDN5-212ENST00000550880 EID1Q9Y6B2 187 aa17.55■□□□□ 0.4
PFDN5-212ENST00000550880 SYNMO15061 1565 aa17.54■□□□□ 0.4
PFDN5-212ENST00000550880 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
PFDN5-212ENST00000550880 SCAF11Q99590 1463 aaKnown RBP17.53■□□□□ 0.4
PFDN5-212ENST00000550880 MAST1Q9Y2H9 1570 aa17.53■□□□□ 0.4
PFDN5-212ENST00000550880 EIF2AK4Q9P2K8 1649 aaKnown RBP17.52■□□□□ 0.4
PFDN5-212ENST00000550880 LRRC9Q6ZRR7 1453 aa17.51■□□□□ 0.39
PFDN5-212ENST00000550880 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
PFDN5-212ENST00000550880 LTKP29376 864 aa17.5■□□□□ 0.39
PFDN5-212ENST00000550880 MYOM3Q5VTT5 1437 aa17.49■□□□□ 0.39
PFDN5-212ENST00000550880 STRCP1A6NGW2 1772 aa17.49■□□□□ 0.39
PFDN5-212ENST00000550880 DUOX2Q9NRD8 1548 aa17.49■□□□□ 0.39
PFDN5-212ENST00000550880 UBR1Q8IWV7 1749 aa17.47■□□□□ 0.39
PFDN5-212ENST00000550880 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
PFDN5-212ENST00000550880 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
PFDN5-212ENST00000550880 ARHGAP23Q9P227 1491 aa17.46■□□□□ 0.39
PFDN5-212ENST00000550880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.397e-8■■□□□ 12.6
PFDN5-212ENST00000550880 SLIT1O75093 1534 aa17.46■□□□□ 0.39
PFDN5-212ENST00000550880 KANK1Q14678 1352 aa17.45■□□□□ 0.38
PFDN5-212ENST00000550880 RRP7BPQ9NSQ0 103 aa17.45■□□□□ 0.38
PFDN5-212ENST00000550880 CEP152O94986 1710 aa17.44■□□□□ 0.38
PFDN5-212ENST00000550880 MROH1Q8NDA8 1641 aa17.44■□□□□ 0.38
PFDN5-212ENST00000550880 KIF15Q9NS87 1388 aa17.44■□□□□ 0.38
PFDN5-212ENST00000550880 CFAP65Q6ZU64 1925 aaKnown RBP17.44■□□□□ 0.38
PFDN5-212ENST00000550880 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
PFDN5-212ENST00000550880 FAM135BQ49AJ0 1406 aa17.43■□□□□ 0.38
PFDN5-212ENST00000550880 ERBINQ96RT1 1412 aa17.43■□□□□ 0.38
PFDN5-212ENST00000550880 TMEM2Q9UHN6 1383 aa17.42■□□□□ 0.38
PFDN5-212ENST00000550880 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
PFDN5-212ENST00000550880 KCNA6P17658 529 aa17.41■□□□□ 0.38
PFDN5-212ENST00000550880 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
PFDN5-212ENST00000550880 PROSER2Q86WR7 435 aaPredicted RBP17.4■□□□□ 0.38
PFDN5-212ENST00000550880 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
PFDN5-212ENST00000550880 TMEM94Q12767 1356 aa17.4■□□□□ 0.38
PFDN5-212ENST00000550880 APLP2Q06481 763 aa17.39■□□□□ 0.37
PFDN5-212ENST00000550880 BCANQ96GW7 911 aa17.39■□□□□ 0.37
PFDN5-212ENST00000550880 IDI1Q13907 227 aa17.37■□□□□ 0.37
PFDN5-212ENST00000550880 SLC26A8Q96RN1 970 aa17.37■□□□□ 0.37
PFDN5-212ENST00000550880 ABCC5O15440 1437 aa17.37■□□□□ 0.37
PFDN5-212ENST00000550880 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
PFDN5-212ENST00000550880 PIK3C2BO00750 1634 aa17.36■□□□□ 0.37
PFDN5-212ENST00000550880 ANKRD30AQ9BXX3 1397 aa17.34■□□□□ 0.37
PFDN5-212ENST00000550880 XIRP1Q702N8 1843 aaKnown RBP17.33■□□□□ 0.37
PFDN5-212ENST00000550880 MSH6P52701 1360 aa17.33■□□□□ 0.36
PFDN5-212ENST00000550880 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
PFDN5-212ENST00000550880 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
PFDN5-212ENST00000550880 SLC52A1Q9NWF4 448 aa17.33■□□□□ 0.36
PFDN5-212ENST00000550880 DAPK1P53355 1430 aa17.32■□□□□ 0.36
PFDN5-212ENST00000550880 HDGFP51858 240 aaKnown RBP17.32■□□□□ 0.36
PFDN5-212ENST00000550880 RBM33Q96EV2 1170 aaKnown RBP17.32■□□□□ 0.36
PFDN5-212ENST00000550880 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
PFDN5-212ENST00000550880 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
PFDN5-212ENST00000550880 LMTK2Q8IWU2 1503 aa17.31■□□□□ 0.36
PFDN5-212ENST00000550880 PTPN23Q9H3S7 1636 aa17.3■□□□□ 0.36
PFDN5-212ENST00000550880 SLAIN2Q9P270 581 aa17.3■□□□□ 0.36
PFDN5-212ENST00000550880 NKTRP30414 1462 aaKnown RBP17.3■□□□□ 0.36
PFDN5-212ENST00000550880 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
PFDN5-212ENST00000550880 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
PFDN5-212ENST00000550880 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms