RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.08
CNOT2-220ENST00000549750 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.08
CNOT2-220ENST00000549750 RSPH4AQ5TD94 716 aa21.76■■□□□ 1.07
CNOT2-220ENST00000549750 ARHGEF5Q12774 1597 aa21.75■■□□□ 1.07
CNOT2-220ENST00000549750 PTPRKQ15262 1439 aa21.75■■□□□ 1.07
CNOT2-220ENST00000549750 CEP170BQ9Y4F5 1589 aaPredicted RBP21.74■■□□□ 1.07
CNOT2-220ENST00000549750 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
CNOT2-220ENST00000549750 ZNF142P52746 1687 aaPredicted RBP21.74■■□□□ 1.07
CNOT2-220ENST00000549750 CLTCQ00610 1675 aaKnown RBP21.74■■□□□ 1.07
CNOT2-220ENST00000549750 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
CNOT2-220ENST00000549750 GGT6Q6P531 493 aa21.72■■□□□ 1.07
CNOT2-220ENST00000549750 DHX29Q7Z478 1369 aaKnown RBP21.72■■□□□ 1.07
CNOT2-220ENST00000549750 FAM135AQ9P2D6 1515 aa21.7■■□□□ 1.06
CNOT2-220ENST00000549750 CPS1P31327 1500 aa21.67■■□□□ 1.06
CNOT2-220ENST00000549750 A2ML1A8K2U0 1454 aa21.66■■□□□ 1.06
CNOT2-220ENST00000549750 MIA2Q96PC5 1412 aa21.66■■□□□ 1.06
CNOT2-220ENST00000549750 MAST1Q9Y2H9 1570 aa21.65■■□□□ 1.06
CNOT2-220ENST00000549750 SHANK2Q9UPX8 1470 aa21.64■■□□□ 1.06
CNOT2-220ENST00000549750 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
CNOT2-220ENST00000549750 KANK4Q5T7N3 995 aaPredicted RBP21.63■■□□□ 1.05
CNOT2-220ENST00000549750 DNMT1P26358 1616 aaKnown RBP21.62■■□□□ 1.05
CNOT2-220ENST00000549750 KDM5DQ9BY66 1539 aa21.6■■□□□ 1.05
CNOT2-220ENST00000549750 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
CNOT2-220ENST00000549750 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
CNOT2-220ENST00000549750 ANKLE2Q86XL3 938 aa21.59■■□□□ 1.05
CNOT2-220ENST00000549750 KIF3BO15066 747 aa21.58■■□□□ 1.05
CNOT2-220ENST00000549750 RNF17Q9BXT8 1623 aaKnown RBP21.56■■□□□ 1.04
CNOT2-220ENST00000549750 EIF2AK4Q9P2K8 1649 aaKnown RBP21.56■■□□□ 1.04
CNOT2-220ENST00000549750 TNRQ92752 1358 aa21.56■■□□□ 1.04
CNOT2-220ENST00000549750 PZPP20742 1482 aa21.56■■□□□ 1.04
CNOT2-220ENST00000549750 FBXO31Q5XUX0 539 aaPredicted RBP21.55■■□□□ 1.04
CNOT2-220ENST00000549750 THEMISQ8N1K5 641 aaPredicted RBP21.55■■□□□ 1.04
CNOT2-220ENST00000549750 NEURL4Q96JN8 1562 aa21.55■■□□□ 1.04
CNOT2-220ENST00000549750 POLR1AO95602 1720 aaPredicted RBP21.53■■□□□ 1.04
CNOT2-220ENST00000549750 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
CNOT2-220ENST00000549750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.51■■□□□ 1.033e-6■■□□□ 12.8
CNOT2-220ENST00000549750 ZC3H13Q5T200 1668 aaKnown RBP21.51■■□□□ 1.03
CNOT2-220ENST00000549750 VWDEQ8N2E2 1590 aa21.5■■□□□ 1.03
CNOT2-220ENST00000549750 ALKQ9UM73 1620 aa21.5■■□□□ 1.03
CNOT2-220ENST00000549750 WASHC2CQ9Y4E1 1318 aa21.5■■□□□ 1.03
CNOT2-220ENST00000549750 CROCC2H7BZ55 1655 aa21.5■■□□□ 1.03
CNOT2-220ENST00000549750 PTPN23Q9H3S7 1636 aa21.48■■□□□ 1.03
CNOT2-220ENST00000549750 NPHP4O75161 1426 aaPredicted RBP21.48■■□□□ 1.03
CNOT2-220ENST00000549750 APLP2Q06481 763 aa21.48■■□□□ 1.03
CNOT2-220ENST00000549750 DUOX2Q9NRD8 1548 aa21.48■■□□□ 1.03
CNOT2-220ENST00000549750 MROH1Q8NDA8 1641 aa21.47■■□□□ 1.03
CNOT2-220ENST00000549750 ABCC3O15438 1527 aa21.47■■□□□ 1.03
CNOT2-220ENST00000549750 MED14O60244 1454 aa21.46■■□□□ 1.03
CNOT2-220ENST00000549750 RGS17Q9UGC6 210 aaPredicted RBP21.46■■□□□ 1.03
CNOT2-220ENST00000549750 ABCC5O15440 1437 aa21.45■■□□□ 1.02
CNOT2-220ENST00000549750 NLRP1Q9C000 1473 aa21.45■■□□□ 1.02
CNOT2-220ENST00000549750 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
CNOT2-220ENST00000549750 ERBINQ96RT1 1412 aa21.42■■□□□ 1.02
CNOT2-220ENST00000549750 DEPDC5O75140 1603 aa21.41■■□□□ 1.02
CNOT2-220ENST00000549750 UGGT1Q9NYU2 1555 aa21.41■■□□□ 1.02
CNOT2-220ENST00000549750 LRRC7Q96NW7 1537 aa21.41■■□□□ 1.02
CNOT2-220ENST00000549750 DAPK1P53355 1430 aa21.41■■□□□ 1.02
CNOT2-220ENST00000549750 PRDM15P57071 1507 aaPredicted RBP21.4■■□□□ 1.02
CNOT2-220ENST00000549750 KIF15Q9NS87 1388 aa21.39■■□□□ 1.02
CNOT2-220ENST00000549750 CEP152O94986 1710 aa21.37■■□□□ 1.01
CNOT2-220ENST00000549750 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
CNOT2-220ENST00000549750 IQGAP1P46940 1657 aa21.36■■□□□ 1.01
CNOT2-220ENST00000549750 ARHGAP31Q2M1Z3 1444 aa21.35■■□□□ 1.01
CNOT2-220ENST00000549750 STRCP1A6NGW2 1772 aa21.33■■□□□ 1.01
CNOT2-220ENST00000549750 POTEAQ6S8J7 498 aa21.32■■□□□ 1
CNOT2-220ENST00000549750 SYNMO15061 1565 aa21.31■■□□□ 1
CNOT2-220ENST00000549750 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
CNOT2-220ENST00000549750 ADGRL2O95490 1459 aa21.31■■□□□ 1
CNOT2-220ENST00000549750 RRP7BPQ9NSQ0 103 aa21.3■■□□□ 1
CNOT2-220ENST00000549750 LMTK2Q8IWU2 1503 aa21.29■■□□□ 1
CNOT2-220ENST00000549750 UBR1Q8IWV7 1749 aa21.26■□□□□ 0.99
CNOT2-220ENST00000549750 FAM135BQ49AJ0 1406 aa21.25■□□□□ 0.99
CNOT2-220ENST00000549750 CFAP65Q6ZU64 1925 aaKnown RBP21.25■□□□□ 0.99
CNOT2-220ENST00000549750 KANK1Q14678 1352 aa21.23■□□□□ 0.99
CNOT2-220ENST00000549750 TXNDC2Q86VQ3 553 aa21.22■□□□□ 0.99
CNOT2-220ENST00000549750 SCAF11Q99590 1463 aaKnown RBP21.21■□□□□ 0.99
CNOT2-220ENST00000549750 ARHGAP23Q9P227 1491 aa21.21■□□□□ 0.99
CNOT2-220ENST00000549750 SLIT1O75093 1534 aa21.21■□□□□ 0.99
CNOT2-220ENST00000549750 KDM5AP29375 1690 aaKnown RBP21.21■□□□□ 0.99
CNOT2-220ENST00000549750 LTKP29376 864 aa21.2■□□□□ 0.98
CNOT2-220ENST00000549750 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
CNOT2-220ENST00000549750 EFCAB6Q5THR3 1501 aa21.19■□□□□ 0.98
CNOT2-220ENST00000549750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.986e-8■■■■□ 21.8
CNOT2-220ENST00000549750 EID1Q9Y6B2 187 aa21.17■□□□□ 0.98
CNOT2-220ENST00000549750 ANKRD50Q9ULJ7 1429 aa21.17■□□□□ 0.98
CNOT2-220ENST00000549750 PIK3C2BO00750 1634 aa21.17■□□□□ 0.98
CNOT2-220ENST00000549750 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
CNOT2-220ENST00000549750 NOS1P29475 1434 aa21.15■□□□□ 0.98
CNOT2-220ENST00000549750 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
CNOT2-220ENST00000549750 XIRP1Q702N8 1843 aaKnown RBP21.13■□□□□ 0.97
CNOT2-220ENST00000549750 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
CNOT2-220ENST00000549750 ROCK1Q13464 1354 aa21.11■□□□□ 0.97
CNOT2-220ENST00000549750 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
CNOT2-220ENST00000549750 UNC13BO14795 1591 aa21.1■□□□□ 0.97
CNOT2-220ENST00000549750 TET3O43151 1660 aa21.1■□□□□ 0.97
CNOT2-220ENST00000549750 KCNA6P17658 529 aa21.09■□□□□ 0.97
CNOT2-220ENST00000549750 PROSER2Q86WR7 435 aaPredicted RBP21.09■□□□□ 0.97
CNOT2-220ENST00000549750 IDI1Q13907 227 aa21.07■□□□□ 0.96
CNOT2-220ENST00000549750 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
CNOT2-220ENST00000549750 ADGRB3O60242 1522 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms