RNA–Protein interactions for RNA: ENST00000547206.5

NR4A1-208, Transcript of nuclear receptor subfamily 4 group A member 1, human

TSL 4

Gene NR4A1, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR4A1-208	ENST00000547206	SHANK2	Q9UPX8	1470 aa		14.01	□□□□□ -0.17
NR4A1-208	ENST00000547206	ABCC5	O15440	1437 aa		14.01	□□□□□ -0.17
NR4A1-208	ENST00000547206	DMRT2	Q9Y5R5	561 aa		14.01	□□□□□ -0.17
NR4A1-208	ENST00000547206	DNMT1	P26358	1616 aa	Known RBP	14.01	□□□□□ -0.17
NR4A1-208	ENST00000547206	RNF17	Q9BXT8	1623 aa	Known RBP	14.01	□□□□□ -0.17
NR4A1-208	ENST00000547206	WASHC2C	Q9Y4E1	1318 aa		14	□□□□□ -0.17
NR4A1-208	ENST00000547206	ZNF142	P52746	1687 aa	Predicted RBP	14	□□□□□ -0.17
NR4A1-208	ENST00000547206	MYO3A	Q8NEV4	1616 aa		14	□□□□□ -0.17
NR4A1-208	ENST00000547206	DUOX2	Q9NRD8	1548 aa		14	□□□□□ -0.17
NR4A1-208	ENST00000547206	DAPK1	P53355	1430 aa		13.99	□□□□□ -0.17
NR4A1-208	ENST00000547206	PZP	P20742	1482 aa		13.98	□□□□□ -0.17
NR4A1-208	ENST00000547206	PTPRT	O14522	1441 aa		13.98	□□□□□ -0.17
NR4A1-208	ENST00000547206	NCOA1	Q15788	1441 aa		13.98	□□□□□ -0.17
NR4A1-208	ENST00000547206	ZC3H13	Q5T200	1668 aa	Known RBP	13.98	□□□□□ -0.17
NR4A1-208	ENST00000547206	CAMSAP1	Q5T5Y3	1602 aa		13.97	□□□□□ -0.17
NR4A1-208	ENST00000547206	KIF15	Q9NS87	1388 aa		13.97	□□□□□ -0.17
NR4A1-208	ENST00000547206	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.97	□□□□□ -0.17
NR4A1-208	ENST00000547206	MROH1	Q8NDA8	1641 aa		13.95	□□□□□ -0.18
NR4A1-208	ENST00000547206	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.95	□□□□□ -0.18
NR4A1-208	ENST00000547206	FBXO41	Q8TF61	875 aa		13.95	□□□□□ -0.18
NR4A1-208	ENST00000547206	RRP7BP	Q9NSQ0	103 aa		13.95	□□□□□ -0.18
NR4A1-208	ENST00000547206	TNR	Q92752	1358 aa		13.95	□□□□□ -0.18
NR4A1-208	ENST00000547206	ABCC3	O15438	1527 aa		13.95	□□□□□ -0.18
NR4A1-208	ENST00000547206	A2ML1	A8K2U0	1454 aa		13.94	□□□□□ -0.18
NR4A1-208	ENST00000547206	ERBIN	Q96RT1	1412 aa		13.94	□□□□□ -0.18
NR4A1-208	ENST00000547206	ANKRD30A	Q9BXX3	1397 aa		13.94	□□□□□ -0.18
NR4A1-208	ENST00000547206	PLA2R1	Q13018	1463 aa		13.93	□□□□□ -0.18
NR4A1-208	ENST00000547206	CEP152	O94986	1710 aa		13.93	□□□□□ -0.18
NR4A1-208	ENST00000547206	FAM50A	Q14320	339 aa	Known RBP	13.93	□□□□□ -0.18
NR4A1-208	ENST00000547206	CHIC2	Q9UKJ5	165 aa		13.93	□□□□□ -0.18
NR4A1-208	ENST00000547206	CERK	Q8TCT0	537 aa		13.92	□□□□□ -0.18
NR4A1-208	ENST00000547206	CFAP65	Q6ZU64	1925 aa	Known RBP	13.92	□□□□□ -0.18
NR4A1-208	ENST00000547206	NCKAP5L	Q9HCH0	1330 aa		13.91	□□□□□ -0.18
NR4A1-208	ENST00000547206	PRDM15	P57071	1507 aa	Predicted RBP	13.91	□□□□□ -0.18
NR4A1-208	ENST00000547206	PKD2	Q13563	968 aa		13.91	□□□□□ -0.18
NR4A1-208	ENST00000547206	ADGRL2	O95490	1459 aa		13.91	□□□□□ -0.18
NR4A1-208	ENST00000547206	NLRP1	Q9C000	1473 aa		13.9	□□□□□ -0.18
NR4A1-208	ENST00000547206	DEPDC5	O75140	1603 aa		13.9	□□□□□ -0.19
NR4A1-208	ENST00000547206	SPATA31D1	Q6ZQQ2	1576 aa		13.89	□□□□□ -0.19
NR4A1-208	ENST00000547206	ERVK-7	P63135	1459 aa		13.87	□□□□□ -0.19
NR4A1-208	ENST00000547206	KANK1	Q14678	1352 aa		13.87	□□□□□ -0.19
NR4A1-208	ENST00000547206	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
NR4A1-208	ENST00000547206	ARHGAP31	Q2M1Z3	1444 aa		13.87	□□□□□ -0.19
NR4A1-208	ENST00000547206	POLR1A	O95602	1720 aa	Predicted RBP	13.87	□□□□□ -0.19
NR4A1-208	ENST00000547206	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.86	□□□□□ -0.19
NR4A1-208	ENST00000547206	UGGT1	Q9NYU2	1555 aa		13.86	□□□□□ -0.19
NR4A1-208	ENST00000547206	LTBP4	Q8N2S1	1624 aa		13.85	□□□□□ -0.19
NR4A1-208	ENST00000547206	VWDE	Q8N2E2	1590 aa		13.84	□□□□□ -0.19
NR4A1-208	ENST00000547206	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.84	□□□□□ -0.19
NR4A1-208	ENST00000547206	LMTK2	Q8IWU2	1503 aa		13.84	□□□□□ -0.19
NR4A1-208	ENST00000547206	ANKRD50	Q9ULJ7	1429 aa		13.83	□□□□□ -0.2
NR4A1-208	ENST00000547206	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
NR4A1-208	ENST00000547206	ANKLE2	Q86XL3	938 aa		13.82	□□□□□ -0.2
NR4A1-208	ENST00000547206	NEURL4	Q96JN8	1562 aa		13.82	□□□□□ -0.2
NR4A1-208	ENST00000547206	ROCK1	Q13464	1354 aa		13.81	□□□□□ -0.2
NR4A1-208	ENST00000547206	UBR1	Q8IWV7	1749 aa		13.81	□□□□□ -0.2
NR4A1-208	ENST00000547206	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.8	□□□□□ -0.2
NR4A1-208	ENST00000547206	IQSEC2	Q5JU85	1478 aa		13.8	□□□□□ -0.2
NR4A1-208	ENST00000547206	EFCAB6	Q5THR3	1501 aa		13.79	□□□□□ -0.2
NR4A1-208	ENST00000547206	MED14	O60244	1454 aa		13.78	□□□□□ -0.2
NR4A1-208	ENST00000547206	PIK3C2B	O00750	1634 aa		13.76	□□□□□ -0.21
NR4A1-208	ENST00000547206	UNC13B	O14795	1591 aa		13.76	□□□□□ -0.21
NR4A1-208	ENST00000547206	NPHP4	O75161	1426 aa	Predicted RBP	13.76	□□□□□ -0.21
NR4A1-208	ENST00000547206	ITGAE	P38570	1179 aa		13.76	□□□□□ -0.21
NR4A1-208	ENST00000547206	TET3	O43151	1660 aa		13.75	□□□□□ -0.21
NR4A1-208	ENST00000547206	IQGAP1	P46940	1657 aa		13.75	□□□□□ -0.21
NR4A1-208	ENST00000547206	KDM5A	P29375	1690 aa	Known RBP	13.75	□□□□□ -0.21
NR4A1-208	ENST00000547206	GCC2	Q8IWJ2	1684 aa		13.75	□□□□□ -0.21
NR4A1-208	ENST00000547206	SYNM	O15061	1565 aa		13.75	□□□□□ -0.21
NR4A1-208	ENST00000547206	RPRD2	Q5VT52	1461 aa	Known RBP	13.74	□□□□□ -0.21
NR4A1-208	ENST00000547206	NOS1	P29475	1434 aa		13.74	□□□□□ -0.21
NR4A1-208	ENST00000547206	RRBP1	Q9P2E9	1410 aa	Known RBP	13.74	□□□□□ -0.21
NR4A1-208	ENST00000547206	SLIT1	O75093	1534 aa		13.74	□□□□□ -0.21
NR4A1-208	ENST00000547206	ARHGAP23	Q9P227	1491 aa		13.74	□□□□□ -0.21
NR4A1-208	ENST00000547206	IDI1	Q13907	227 aa		13.73	□□□□□ -0.21
NR4A1-208	ENST00000547206	STAG3	Q9UJ98	1225 aa		13.73	□□□□□ -0.21
NR4A1-208	ENST00000547206	CPS1	P31327	1500 aa		13.72	□□□□□ -0.21
NR4A1-208	ENST00000547206	SCAF11	Q99590	1463 aa	Known RBP	13.72	□□□□□ -0.21
NR4A1-208	ENST00000547206	IQGAP3	Q86VI3	1631 aa		13.72	□□□□□ -0.21
NR4A1-208	ENST00000547206	LTK	P29376	864 aa		13.71	□□□□□ -0.21
NR4A1-208	ENST00000547206	TXNDC2	Q86VQ3	553 aa		13.71	□□□□□ -0.21
NR4A1-208	ENST00000547206	SLC52A1	Q9NWF4	448 aa		13.71	□□□□□ -0.21
NR4A1-208	ENST00000547206	EID1	Q9Y6B2	187 aa		13.71	□□□□□ -0.21
NR4A1-208	ENST00000547206	TMEM2	Q9UHN6	1383 aa		13.7	□□□□□ -0.22
NR4A1-208	ENST00000547206		E9PCH4	1651 aa		13.69	□□□□□ -0.22
NR4A1-208	ENST00000547206	NUP155	O75694	1391 aa		13.69	□□□□□ -0.22
NR4A1-208	ENST00000547206	ADGRB3	O60242	1522 aa		13.69	□□□□□ -0.22
NR4A1-208	ENST00000547206	MYO5B	Q9ULV0	1848 aa		13.67	□□□□□ -0.22
NR4A1-208	ENST00000547206	STRCP1	A6NGW2	1772 aa		13.67	□□□□□ -0.22
NR4A1-208	ENST00000547206	UBAP1L	F5GYI3	381 aa		13.66	□□□□□ -0.22
NR4A1-208	ENST00000547206	TMEM131L	A2VDJ0	1609 aa		13.64	□□□□□ -0.23
NR4A1-208	ENST00000547206	NAIP	Q13075	1403 aa		13.64	□□□□□ -0.23
NR4A1-208	ENST00000547206	TOM1	O60784	492 aa		13.62	□□□□□ -0.23
NR4A1-208	ENST00000547206	LRRC7	Q96NW7	1537 aa		13.61	□□□□□ -0.23
NR4A1-208	ENST00000547206	HDGF	P51858	240 aa	Known RBP	13.61	□□□□□ -0.23
NR4A1-208	ENST00000547206	ZFYVE9	O95405	1425 aa		13.61	□□□□□ -0.23
NR4A1-208	ENST00000547206	SPHKAP	Q2M3C7	1700 aa		13.61	□□□□□ -0.23
NR4A1-208	ENST00000547206	HFM1	A2PYH4	1435 aa		13.6	□□□□□ -0.23
NR4A1-208	ENST00000547206	CHGA	P10645	457 aa	Known RBP	13.6	□□□□□ -0.23
NR4A1-208	ENST00000547206	RIMS2	Q9UQ26	1411 aa		13.6	□□□□□ -0.23

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