RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
CHEK1-218ENST00000544373 MAST1Q9Y2H9 1570 aa16.69■□□□□ 0.26
CHEK1-218ENST00000544373 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
CHEK1-218ENST00000544373 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
CHEK1-218ENST00000544373 STRCQ7RTU9 1775 aa16.68■□□□□ 0.26
CHEK1-218ENST00000544373 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
CHEK1-218ENST00000544373 FBXO41Q8TF61 875 aa16.67■□□□□ 0.26
CHEK1-218ENST00000544373 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
CHEK1-218ENST00000544373 CHIC2Q9UKJ5 165 aa16.66■□□□□ 0.26
CHEK1-218ENST00000544373 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
CHEK1-218ENST00000544373 DAPK1P53355 1430 aa16.65■□□□□ 0.26
CHEK1-218ENST00000544373 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
CHEK1-218ENST00000544373 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
CHEK1-218ENST00000544373 NCKAP5LQ9HCH0 1330 aa16.65■□□□□ 0.26
CHEK1-218ENST00000544373 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
CHEK1-218ENST00000544373 CERKQ8TCT0 537 aa16.63■□□□□ 0.25
CHEK1-218ENST00000544373 CAMSAP1Q5T5Y3 1602 aa16.63■□□□□ 0.25
CHEK1-218ENST00000544373 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
CHEK1-218ENST00000544373 PZPP20742 1482 aa16.62■□□□□ 0.25
CHEK1-218ENST00000544373 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
CHEK1-218ENST00000544373 PPARGC1BQ86YN6 1023 aaKnown RBP16.62■□□□□ 0.25
CHEK1-218ENST00000544373 MYO3AQ8NEV4 1616 aa16.62■□□□□ 0.25
CHEK1-218ENST00000544373 TNRQ92752 1358 aa16.62■□□□□ 0.25
CHEK1-218ENST00000544373 PTPRTO14522 1441 aa16.61■□□□□ 0.25
CHEK1-218ENST00000544373 DUOX2Q9NRD8 1548 aa16.61■□□□□ 0.25
CHEK1-218ENST00000544373 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
CHEK1-218ENST00000544373 ABCC3O15438 1527 aa16.6■□□□□ 0.25
CHEK1-218ENST00000544373 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
CHEK1-218ENST00000544373 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
CHEK1-218ENST00000544373 MROH1Q8NDA8 1641 aa16.59■□□□□ 0.25
CHEK1-218ENST00000544373 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
CHEK1-218ENST00000544373 A2ML1A8K2U0 1454 aa16.59■□□□□ 0.25
CHEK1-218ENST00000544373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.242e-7■■□□□ 11.9
CHEK1-218ENST00000544373 ERBINQ96RT1 1412 aa16.57■□□□□ 0.24
CHEK1-218ENST00000544373 EIF2AK4Q9P2K8 1649 aaKnown RBP16.57■□□□□ 0.24
CHEK1-218ENST00000544373 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
CHEK1-218ENST00000544373 CROCC2H7BZ55 1655 aa16.57■□□□□ 0.24
CHEK1-218ENST00000544373 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
CHEK1-218ENST00000544373 PKD2Q13563 968 aa16.56■□□□□ 0.24
CHEK1-218ENST00000544373 PLA2R1Q13018 1463 aa16.55■□□□□ 0.24
CHEK1-218ENST00000544373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHEK1-218ENST00000544373 ZNF335Q9H4Z2 1342 aaPredicted RBP16.52■□□□□ 0.23
CHEK1-218ENST00000544373 ERVK-7P63135 1459 aa16.52■□□□□ 0.23
CHEK1-218ENST00000544373 LTBP4Q8N2S1 1624 aa16.51■□□□□ 0.23
CHEK1-218ENST00000544373 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
CHEK1-218ENST00000544373 ADGRL2O95490 1459 aa16.5■□□□□ 0.23
CHEK1-218ENST00000544373 NLRP1Q9C000 1473 aa16.5■□□□□ 0.23
CHEK1-218ENST00000544373 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
CHEK1-218ENST00000544373 SPATA31D1Q6ZQQ2 1576 aa16.5■□□□□ 0.23
CHEK1-218ENST00000544373 ZC3H13Q5T200 1668 aaKnown RBP16.49■□□□□ 0.23
CHEK1-218ENST00000544373 CEP152O94986 1710 aa16.48■□□□□ 0.23
CHEK1-218ENST00000544373 UGGT1Q9NYU2 1555 aa16.48■□□□□ 0.23
CHEK1-218ENST00000544373 ARHGAP31Q2M1Z3 1444 aa16.48■□□□□ 0.23
CHEK1-218ENST00000544373 KANK1Q14678 1352 aa16.47■□□□□ 0.23
CHEK1-218ENST00000544373 ANKLE2Q86XL3 938 aa16.47■□□□□ 0.23
CHEK1-218ENST00000544373 ITGAEP38570 1179 aa16.46■□□□□ 0.23
CHEK1-218ENST00000544373 ANKRD50Q9ULJ7 1429 aa16.46■□□□□ 0.23
CHEK1-218ENST00000544373 DEPDC5O75140 1603 aa16.46■□□□□ 0.23
CHEK1-218ENST00000544373 NEURL4Q96JN8 1562 aa16.45■□□□□ 0.22
CHEK1-218ENST00000544373 VWDEQ8N2E2 1590 aa16.44■□□□□ 0.22
CHEK1-218ENST00000544373 LMTK2Q8IWU2 1503 aa16.43■□□□□ 0.22
CHEK1-218ENST00000544373 CFAP65Q6ZU64 1925 aaKnown RBP16.42■□□□□ 0.22
CHEK1-218ENST00000544373 IDI1Q13907 227 aa16.41■□□□□ 0.22
CHEK1-218ENST00000544373 NPHP4O75161 1426 aaPredicted RBP16.41■□□□□ 0.22
CHEK1-218ENST00000544373 LTKP29376 864 aa16.4■□□□□ 0.22
CHEK1-218ENST00000544373 ROCK1Q13464 1354 aa16.4■□□□□ 0.22
CHEK1-218ENST00000544373 MED14O60244 1454 aa16.39■□□□□ 0.21
CHEK1-218ENST00000544373 EFCAB6Q5THR3 1501 aa16.37■□□□□ 0.21
CHEK1-218ENST00000544373 POLR1AO95602 1720 aaPredicted RBP16.37■□□□□ 0.21
CHEK1-218ENST00000544373 NOS1P29475 1434 aa16.37■□□□□ 0.21
CHEK1-218ENST00000544373 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
CHEK1-218ENST00000544373 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
CHEK1-218ENST00000544373 IQSEC2Q5JU85 1478 aa16.36■□□□□ 0.21
CHEK1-218ENST00000544373 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
CHEK1-218ENST00000544373 SYNMO15061 1565 aa16.35■□□□□ 0.21
CHEK1-218ENST00000544373 ARHGAP23Q9P227 1491 aa16.34■□□□□ 0.21
CHEK1-218ENST00000544373 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
CHEK1-218ENST00000544373 TMEM2Q9UHN6 1383 aa16.33■□□□□ 0.21
CHEK1-218ENST00000544373 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.21
CHEK1-218ENST00000544373 SCAF11Q99590 1463 aaKnown RBP16.33■□□□□ 0.2
CHEK1-218ENST00000544373 SLIT1O75093 1534 aa16.33■□□□□ 0.2
CHEK1-218ENST00000544373 PIK3C2BO00750 1634 aa16.33■□□□□ 0.2
CHEK1-218ENST00000544373 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
CHEK1-218ENST00000544373 NUP155O75694 1391 aa16.32■□□□□ 0.2
CHEK1-218ENST00000544373 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
CHEK1-218ENST00000544373 UNC13BO14795 1591 aa16.3■□□□□ 0.2
CHEK1-218ENST00000544373 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
CHEK1-218ENST00000544373 RPRD2Q5VT52 1461 aaKnown RBP16.3■□□□□ 0.2
CHEK1-218ENST00000544373 CPS1P31327 1500 aa16.29■□□□□ 0.2
CHEK1-218ENST00000544373 TET3O43151 1660 aa16.28■□□□□ 0.2
CHEK1-218ENST00000544373 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
CHEK1-218ENST00000544373 ADGRB3O60242 1522 aa16.25■□□□□ 0.19
CHEK1-218ENST00000544373 NAIPQ13075 1403 aa16.24■□□□□ 0.19
CHEK1-218ENST00000544373 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
CHEK1-218ENST00000544373 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
CHEK1-218ENST00000544373 PIP4K2BP78356 416 aa16.24■□□□□ 0.19
CHEK1-218ENST00000544373 LRRC7Q96NW7 1537 aa16.23■□□□□ 0.19
CHEK1-218ENST00000544373 STRCP1A6NGW2 1772 aa16.23■□□□□ 0.19
CHEK1-218ENST00000544373 E9PCH4 1651 aa16.23■□□□□ 0.19
CHEK1-218ENST00000544373 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms