RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ZNF326Q5BKZ1 582 aaKnown RBP24.42■■□□□ 1.5
SCARB1-208ENST00000544327 ATP10AO60312 1499 aa24.42■■□□□ 1.5
SCARB1-208ENST00000544327 PLA2R1Q13018 1463 aa24.42■■□□□ 1.5
SCARB1-208ENST00000544327 CCDC144AA2RUR9 1427 aa24.42■■□□□ 1.5
SCARB1-208ENST00000544327 CCDC184Q52MB2 194 aa24.41■■□□□ 1.5
SCARB1-208ENST00000544327 TRPM1Q7Z4N2 1603 aa24.41■■□□□ 1.5
SCARB1-208ENST00000544327 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.49
SCARB1-208ENST00000544327 LAMC1P11047 1609 aa24.39■■□□□ 1.49
SCARB1-208ENST00000544327 PRAG1Q86YV5 1406 aa24.38■■□□□ 1.49
SCARB1-208ENST00000544327 CARD11Q9BXL7 1154 aa24.38■■□□□ 1.49
SCARB1-208ENST00000544327 MRS2Q9HD23 443 aa24.37■■□□□ 1.49
SCARB1-208ENST00000544327 DCAF11Q8TEB1 546 aa24.35■■□□□ 1.49
SCARB1-208ENST00000544327 RTEL1-TNFRSF6BF6WH68 1400 aa24.35■■□□□ 1.49
SCARB1-208ENST00000544327 E9PCH4 1651 aa24.34■■□□□ 1.49
SCARB1-208ENST00000544327 GPRASP1Q5JY77 1395 aa24.33■■□□□ 1.49
SCARB1-208ENST00000544327 A2MP01023 1474 aa24.33■■□□□ 1.48
SCARB1-208ENST00000544327 ZBED9Q6R2W3 1325 aa24.32■■□□□ 1.48
SCARB1-208ENST00000544327 EIF2AK4Q9P2K8 1649 aaKnown RBP24.32■■□□□ 1.48
SCARB1-208ENST00000544327 TRAPPC8Q9Y2L5 1435 aa24.32■■□□□ 1.48
SCARB1-208ENST00000544327 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
SCARB1-208ENST00000544327 TSHZ2Q9NRE2 1034 aa24.29■■□□□ 1.48
SCARB1-208ENST00000544327 ZFYVE16Q7Z3T8 1539 aa24.29■■□□□ 1.48
SCARB1-208ENST00000544327 BCANQ96GW7 911 aa24.28■■□□□ 1.48
SCARB1-208ENST00000544327 ABCA9Q8IUA7 1624 aa24.28■■□□□ 1.48
SCARB1-208ENST00000544327 WDR7Q9Y4E6 1490 aa24.28■■□□□ 1.48
SCARB1-208ENST00000544327 ST20-MTHFSA0A0A6YYL1 179 aa24.27■■□□□ 1.48
SCARB1-208ENST00000544327 PRDM15P57071 1507 aaPredicted RBP24.27■■□□□ 1.48
SCARB1-208ENST00000544327 KTN1Q86UP2 1357 aaKnown RBP24.27■■□□□ 1.48
SCARB1-208ENST00000544327 FAM9BQ8IZU0 186 aa24.26■■□□□ 1.47
SCARB1-208ENST00000544327 DEPDC5O75140 1603 aa24.26■■□□□ 1.47
SCARB1-208ENST00000544327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.25■■□□□ 1.47
SCARB1-208ENST00000544327 ERICH6BQ5W0A0 696 aa24.24■■□□□ 1.47
SCARB1-208ENST00000544327 INO80Q9ULG1 1556 aaPredicted RBP24.22■■□□□ 1.47
SCARB1-208ENST00000544327 RNF17Q9BXT8 1623 aaKnown RBP24.21■■□□□ 1.47
SCARB1-208ENST00000544327 SPAG9O60271 1321 aaKnown RBP24.21■■□□□ 1.47
SCARB1-208ENST00000544327 TRPM2O94759 1503 aa24.19■■□□□ 1.46
SCARB1-208ENST00000544327 POLR3GLQ9BT43 218 aa24.19■■□□□ 1.46
SCARB1-208ENST00000544327 COL17A1Q9UMD9 1497 aaPredicted RBP24.17■■□□□ 1.46
SCARB1-208ENST00000544327 VWDEQ8N2E2 1590 aa24.17■■□□□ 1.46
SCARB1-208ENST00000544327 TET3O43151 1660 aa24.16■■□□□ 1.46
SCARB1-208ENST00000544327 ATP7AQ04656 1500 aa24.16■■□□□ 1.46
SCARB1-208ENST00000544327 PTPRTO14522 1441 aa24.16■■□□□ 1.46
SCARB1-208ENST00000544327 FANCAO15360 1455 aa24.16■■□□□ 1.46
SCARB1-208ENST00000544327 CEP152O94986 1710 aa24.15■■□□□ 1.46
SCARB1-208ENST00000544327 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
SCARB1-208ENST00000544327 RALBP1Q15311 655 aa24.14■■□□□ 1.46
SCARB1-208ENST00000544327 RGL3Q3MIN7 710 aa24.14■■□□□ 1.46
SCARB1-208ENST00000544327 BRD4O60885 1362 aaPredicted RBP24.13■■□□□ 1.45
SCARB1-208ENST00000544327 NBPF1Q3BBV0 1214 aa24.13■■□□□ 1.45
SCARB1-208ENST00000544327 NEURL4Q96JN8 1562 aa24.12■■□□□ 1.45
SCARB1-208ENST00000544327 MADDQ8WXG6 1647 aa24.12■■□□□ 1.45
SCARB1-208ENST00000544327 SMG6Q86US8 1419 aaKnown RBP24.12■■□□□ 1.45
SCARB1-208ENST00000544327 AFAP1Q8N556 730 aa24.11■■□□□ 1.45
SCARB1-208ENST00000544327 PNISRQ8TF01 805 aaKnown RBP24.11■■□□□ 1.45
SCARB1-208ENST00000544327 MYBBP1AQ9BQG0 1328 aaKnown RBP24.11■■□□□ 1.45
SCARB1-208ENST00000544327 LRPPRCP42704 1394 aaKnown RBP24.1■■□□□ 1.45
SCARB1-208ENST00000544327 STAC3Q96MF2 364 aa24.1■■□□□ 1.45
SCARB1-208ENST00000544327 TESK2Q96S53 571 aa24.09■■□□□ 1.45
SCARB1-208ENST00000544327 CLTCL1P53675 1640 aa24.08■■□□□ 1.44
SCARB1-208ENST00000544327 ASXL2Q76L83 1435 aa24.07■■□□□ 1.44
SCARB1-208ENST00000544327 ADGRL1O94910 1474 aa24.07■■□□□ 1.44
SCARB1-208ENST00000544327 PARD3Q8TEW0 1356 aa24.07■■□□□ 1.44
SCARB1-208ENST00000544327 IQGAP1P46940 1657 aa24.06■■□□□ 1.44
SCARB1-208ENST00000544327 WASHC2CQ9Y4E1 1318 aa24.06■■□□□ 1.44
SCARB1-208ENST00000544327 MROH1Q8NDA8 1641 aa24.05■■□□□ 1.44
SCARB1-208ENST00000544327 KANK1Q14678 1352 aa24.05■■□□□ 1.44
SCARB1-208ENST00000544327 TMC1Q8TDI8 760 aa24.05■■□□□ 1.44
SCARB1-208ENST00000544327 SCAPERQ9BY12 1400 aa24.04■■□□□ 1.44
SCARB1-208ENST00000544327 DISP3Q9P2K9 1392 aa24.03■■□□□ 1.44
SCARB1-208ENST00000544327 PER1O15534 1290 aaPredicted RBP24.02■■□□□ 1.44
SCARB1-208ENST00000544327 PPP4R2Q9NY27 417 aa24.01■■□□□ 1.43
SCARB1-208ENST00000544327 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
SCARB1-208ENST00000544327 NUDCQ9Y266 331 aa24■■□□□ 1.43
SCARB1-208ENST00000544327 KIDINS220Q9ULH0 1771 aa23.99■■□□□ 1.43
SCARB1-208ENST00000544327 TMF1P82094 1093 aa23.98■■□□□ 1.43
SCARB1-208ENST00000544327 CFAP74Q9C0B2 1584 aa23.98■■□□□ 1.43
SCARB1-208ENST00000544327 IRX6P78412 446 aaPredicted RBP23.98■■□□□ 1.43
SCARB1-208ENST00000544327 NLRP13Q86W25 1043 aa23.98■■□□□ 1.43
SCARB1-208ENST00000544327 LMTK2Q8IWU2 1503 aa23.97■■□□□ 1.43
SCARB1-208ENST00000544327 INSRP06213 1382 aa23.97■■□□□ 1.43
SCARB1-208ENST00000544327 RNF123Q5XPI4 1314 aa23.97■■□□□ 1.43
SCARB1-208ENST00000544327 ZMYM4Q5VZL5 1548 aa23.97■■□□□ 1.43
SCARB1-208ENST00000544327 EFCAB6Q5THR3 1501 aa23.95■■□□□ 1.43
SCARB1-208ENST00000544327 ZNF518AQ6AHZ1 1483 aa23.95■■□□□ 1.42
SCARB1-208ENST00000544327 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
SCARB1-208ENST00000544327 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
SCARB1-208ENST00000544327 MYT1Q01538 1121 aa23.93■■□□□ 1.42
SCARB1-208ENST00000544327 MYOM2P54296 1465 aa23.93■■□□□ 1.42
SCARB1-208ENST00000544327 KIF3BO15066 747 aa23.91■■□□□ 1.42
SCARB1-208ENST00000544327 IFT172Q9UG01 1749 aa23.89■■□□□ 1.42
SCARB1-208ENST00000544327 SYNMO15061 1565 aa23.89■■□□□ 1.41
SCARB1-208ENST00000544327 PPRC1Q5VV67 1664 aaKnown RBP23.89■■□□□ 1.41
SCARB1-208ENST00000544327 MAP3K4Q9Y6R4 1608 aa23.88■■□□□ 1.41
SCARB1-208ENST00000544327 KIF1BO60333 1816 aa23.88■■□□□ 1.41
SCARB1-208ENST00000544327 PANK3Q9H999 370 aa23.88■■□□□ 1.41
SCARB1-208ENST00000544327 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
SCARB1-208ENST00000544327 RBM19Q9Y4C8 960 aaKnown RBP23.87■■□□□ 1.41
SCARB1-208ENST00000544327 MLH3Q9UHC1 1453 aa23.86■■□□□ 1.41
SCARB1-208ENST00000544327 POGZQ7Z3K3 1410 aa23.86■■□□□ 1.41
SCARB1-208ENST00000544327 NPM1P06748 294 aaKnown RBP eCLIP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms