RNA–Protein interactions for RNA: ENST00000543604.1

AC053513.1-201, humanhuman

TSL 3 BASIC

Gene AC053513.1, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC053513.1-201ENST00000543604 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
AC053513.1-201ENST00000543604 FAM9AQ8IZU1 332 aaPredicted RBP13.76□□□□□ -0.21
AC053513.1-201ENST00000543604 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
AC053513.1-201ENST00000543604 MAGI3Q5TCQ9 1506 aa13.75□□□□□ -0.21
AC053513.1-201ENST00000543604 SOX12O15370 315 aa13.75□□□□□ -0.21
AC053513.1-201ENST00000543604 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
AC053513.1-201ENST00000543604 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
AC053513.1-201ENST00000543604 L3MBTL3Q96JM7 780 aaPredicted RBP13.74□□□□□ -0.21
AC053513.1-201ENST00000543604 KIAA0556O60303 1618 aa13.72□□□□□ -0.21
AC053513.1-201ENST00000543604 GOLGA3Q08378 1498 aa13.71□□□□□ -0.21
AC053513.1-201ENST00000543604 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
AC053513.1-201ENST00000543604 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
AC053513.1-201ENST00000543604 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
AC053513.1-201ENST00000543604 PHLDB1Q86UU1 1377 aa13.68□□□□□ -0.22
AC053513.1-201ENST00000543604 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
AC053513.1-201ENST00000543604 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
AC053513.1-201ENST00000543604 MFRPQ9BY79 579 aa13.66□□□□□ -0.22
AC053513.1-201ENST00000543604 ARAP3Q8WWN8 1544 aa13.65□□□□□ -0.22
AC053513.1-201ENST00000543604 NLRP6P59044 892 aa13.65□□□□□ -0.22
AC053513.1-201ENST00000543604 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.22
AC053513.1-201ENST00000543604 G3V3G9 751 aa13.64□□□□□ -0.23
AC053513.1-201ENST00000543604 C3orf67Q6ZVT6 689 aa13.64□□□□□ -0.23
AC053513.1-201ENST00000543604 FBXO22Q8NEZ5 403 aa13.64□□□□□ -0.23
AC053513.1-201ENST00000543604 ABCA8O94911 1581 aa13.63□□□□□ -0.23
AC053513.1-201ENST00000543604 HS6ST3Q8IZP7 471 aa13.63□□□□□ -0.23
AC053513.1-201ENST00000543604 PTPRMP28827 1452 aa13.61□□□□□ -0.23
AC053513.1-201ENST00000543604 ARID3CA6NKF2 412 aa13.61□□□□□ -0.23
AC053513.1-201ENST00000543604 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
AC053513.1-201ENST00000543604 ARID4BQ4LE39 1312 aaPredicted RBP13.61□□□□□ -0.23
AC053513.1-201ENST00000543604 KIF21BO75037 1637 aa13.58□□□□□ -0.24
AC053513.1-201ENST00000543604 FAM163AQ96GL9 167 aaPredicted RBP13.58□□□□□ -0.24
AC053513.1-201ENST00000543604 TMEM121BQ9BXQ6 578 aaPredicted RBP13.58□□□□□ -0.24
AC053513.1-201ENST00000543604 ATP10BO94823 1461 aa13.57□□□□□ -0.24
AC053513.1-201ENST00000543604 P3H3Q8IVL6 736 aa13.56□□□□□ -0.24
AC053513.1-201ENST00000543604 MICALL2Q8IY33 904 aa13.56□□□□□ -0.24
AC053513.1-201ENST00000543604 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
AC053513.1-201ENST00000543604 NEO1Q92859 1461 aa13.55□□□□□ -0.24
AC053513.1-201ENST00000543604 AMER1Q5JTC6 1135 aaPredicted RBP13.55□□□□□ -0.24
AC053513.1-201ENST00000543604 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
AC053513.1-201ENST00000543604 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
AC053513.1-201ENST00000543604 PCF11O94913 1555 aaKnown RBP13.52□□□□□ -0.25
AC053513.1-201ENST00000543604 ADAMTSL3P82987 1691 aa13.52□□□□□ -0.25
AC053513.1-201ENST00000543604 ABCA9Q8IUA7 1624 aa13.51□□□□□ -0.25
AC053513.1-201ENST00000543604 LMTK3Q96Q04 1460 aa13.5□□□□□ -0.25
AC053513.1-201ENST00000543604 PLEKHD1A6NEE1 506 aa13.49□□□□□ -0.25
AC053513.1-201ENST00000543604 PPP1R37O75864 691 aa13.49□□□□□ -0.25
AC053513.1-201ENST00000543604 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
AC053513.1-201ENST00000543604 LCE2DQ5TA82 110 aaPredicted RBP13.49□□□□□ -0.25
AC053513.1-201ENST00000543604 POGZQ7Z3K3 1410 aa13.48□□□□□ -0.25
AC053513.1-201ENST00000543604 DENND4BO75064 1496 aaPredicted RBP13.47□□□□□ -0.25
AC053513.1-201ENST00000543604 HSPA2P54652 639 aa13.46□□□□□ -0.25
AC053513.1-201ENST00000543604 TMEM92Q6UXU6 159 aa13.46□□□□□ -0.25
AC053513.1-201ENST00000543604 BCORL1Q5H9F3 1711 aa13.45□□□□□ -0.26
AC053513.1-201ENST00000543604 CERKQ8TCT0 537 aa13.45□□□□□ -0.26
AC053513.1-201ENST00000543604 AKNAQ7Z591 1439 aa13.45□□□□□ -0.26
AC053513.1-201ENST00000543604 MADDQ8WXG6 1647 aa13.44□□□□□ -0.26
AC053513.1-201ENST00000543604 FHOD3Q2V2M9 1422 aa13.44□□□□□ -0.26
AC053513.1-201ENST00000543604 FANCAO15360 1455 aa13.42□□□□□ -0.26
AC053513.1-201ENST00000543604 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
AC053513.1-201ENST00000543604 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
AC053513.1-201ENST00000543604 ARHGEF40Q8TER5 1519 aa13.41□□□□□ -0.26
AC053513.1-201ENST00000543604 SNPHO15079 494 aa13.41□□□□□ -0.26
AC053513.1-201ENST00000543604 ST18O60284 1047 aa13.41□□□□□ -0.26
AC053513.1-201ENST00000543604 RAPGEF6Q8TEU7 1601 aa13.41□□□□□ -0.26
AC053513.1-201ENST00000543604 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.26
AC053513.1-201ENST00000543604 MAGI2Q86UL8 1455 aa13.4□□□□□ -0.26
AC053513.1-201ENST00000543604 POTEMA6NI47 508 aa13.39□□□□□ -0.27
AC053513.1-201ENST00000543604 MLECQ14165 292 aa13.39□□□□□ -0.27
AC053513.1-201ENST00000543604 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
AC053513.1-201ENST00000543604 SAMD9Q5K651 1589 aa13.38□□□□□ -0.27
AC053513.1-201ENST00000543604 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
AC053513.1-201ENST00000543604 RIMS1Q86UR5 1692 aaKnown RBP13.36□□□□□ -0.27
AC053513.1-201ENST00000543604 ZFYVE16Q7Z3T8 1539 aa13.35□□□□□ -0.27
AC053513.1-201ENST00000543604 YEATS2Q9ULM3 1422 aa13.35□□□□□ -0.27
AC053513.1-201ENST00000543604 CFAP74Q9C0B2 1584 aa13.35□□□□□ -0.27
AC053513.1-201ENST00000543604 ZMYM4Q5VZL5 1548 aa13.34□□□□□ -0.27
AC053513.1-201ENST00000543604 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
AC053513.1-201ENST00000543604 HOXB3P14651 431 aaPredicted RBP13.33□□□□□ -0.28
AC053513.1-201ENST00000543604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.33□□□□□ -0.28
AC053513.1-201ENST00000543604 RICTORQ6R327 1708 aa13.33□□□□□ -0.28
AC053513.1-201ENST00000543604 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
AC053513.1-201ENST00000543604 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
AC053513.1-201ENST00000543604 EFCAB2Q5VUJ9 269 aa13.32□□□□□ -0.28
AC053513.1-201ENST00000543604 SOCS7O14512 581 aa13.31□□□□□ -0.28
AC053513.1-201ENST00000543604 PLCH2O75038 1416 aa13.3□□□□□ -0.28
AC053513.1-201ENST00000543604 ATP10AO60312 1499 aa13.3□□□□□ -0.28
AC053513.1-201ENST00000543604 C2orf72A6NCS6 295 aa13.3□□□□□ -0.28
AC053513.1-201ENST00000543604 RYDENQ9NUL5 291 aaKnown RBP13.3□□□□□ -0.28
AC053513.1-201ENST00000543604 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
AC053513.1-201ENST00000543604 EEA1Q15075 1411 aa13.3□□□□□ -0.28
AC053513.1-201ENST00000543604 C9orf84Q5VXU9 1444 aa13.29□□□□□ -0.28
AC053513.1-201ENST00000543604 TTC37Q6PGP7 1564 aa13.28□□□□□ -0.28
AC053513.1-201ENST00000543604 CEBPAP49715 358 aaPredicted RBP13.28□□□□□ -0.28
AC053513.1-201ENST00000543604 HECW1Q76N89 1606 aa13.28□□□□□ -0.28
AC053513.1-201ENST00000543604 KIF3CO14782 793 aa13.27□□□□□ -0.29
AC053513.1-201ENST00000543604 ILDR2Q71H61 639 aa13.27□□□□□ -0.29
AC053513.1-201ENST00000543604 MARVELD3Q96A59 401 aa13.27□□□□□ -0.29
AC053513.1-201ENST00000543604 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
AC053513.1-201ENST00000543604 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
AC053513.1-201ENST00000543604 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms