RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZNF644Q9H582 1327 aaPredicted RBP24.42■■□□□ 1.5
SUDS3-204ENST00000543473 ST20-MTHFSA0A0A6YYL1 179 aa24.42■■□□□ 1.5
SUDS3-204ENST00000543473 A0A0G2JS52 829 aa24.42■■□□□ 1.5
SUDS3-204ENST00000543473 ARID3AQ99856 593 aa24.42■■□□□ 1.5
SUDS3-204ENST00000543473 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
SUDS3-204ENST00000543473 CLUAP1Q96AJ1 413 aa24.41■■□□□ 1.5
SUDS3-204ENST00000543473 CENPJQ9HC77 1338 aaPredicted RBP24.39■■□□□ 1.5
SUDS3-204ENST00000543473 CCDC146Q8IYE0 955 aa24.39■■□□□ 1.5
SUDS3-204ENST00000543473 HAP1P54257 671 aaPredicted RBP24.39■■□□□ 1.5
SUDS3-204ENST00000543473 FGD6Q6ZV73 1430 aa24.38■■□□□ 1.49
SUDS3-204ENST00000543473 LRRC9Q6ZRR7 1453 aa24.37■■□□□ 1.49
SUDS3-204ENST00000543473 U2AF1L5P0DN76 240 aaPredicted RBP24.37■■□□□ 1.49
SUDS3-204ENST00000543473 U2AF1Q01081 240 aaKnown RBP eCLIP24.37■■□□□ 1.49
SUDS3-204ENST00000543473 KIAA2012Q0VF49 1180 aa24.37■■□□□ 1.49
SUDS3-204ENST00000543473 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
SUDS3-204ENST00000543473 MCCP23508 829 aa24.36■■□□□ 1.49
SUDS3-204ENST00000543473 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
SUDS3-204ENST00000543473 GOLGA6L4A6NEF3 574 aa24.36■■□□□ 1.49
SUDS3-204ENST00000543473 VSIG10Q8N0Z9 540 aa24.35■■□□□ 1.49
SUDS3-204ENST00000543473 IFT140Q96RY7 1462 aa24.35■■□□□ 1.49
SUDS3-204ENST00000543473 CALD1Q05682 793 aaKnown RBP24.34■■□□□ 1.49
SUDS3-204ENST00000543473 NUTM2DQ5VT03 806 aaPredicted RBP24.33■■□□□ 1.49
SUDS3-204ENST00000543473 NFKBIBQ15653 356 aa24.33■■□□□ 1.49
SUDS3-204ENST00000543473 PAK3O75914 559 aaPredicted RBP24.33■■□□□ 1.48
SUDS3-204ENST00000543473 DDX11L8A8MPP1 907 aa24.32■■□□□ 1.48
SUDS3-204ENST00000543473 GOLGA6L6A8MZA4 724 aa24.32■■□□□ 1.48
SUDS3-204ENST00000543473 CCDC7Q96M83 1385 aa24.31■■□□□ 1.48
SUDS3-204ENST00000543473 USP47Q96K76 1375 aa24.31■■□□□ 1.48
SUDS3-204ENST00000543473 KCNJ4P48050 445 aa24.31■■□□□ 1.48
SUDS3-204ENST00000543473 SOX12O15370 315 aa24.31■■□□□ 1.48
SUDS3-204ENST00000543473 SMC4Q9NTJ3 1288 aa24.31■■□□□ 1.48
SUDS3-204ENST00000543473 NRDCO43847 1150 aa24.3■■□□□ 1.48
SUDS3-204ENST00000543473 APBB1O00213 710 aa24.3■■□□□ 1.48
SUDS3-204ENST00000543473 FOXD4L1Q9NU39 408 aa24.29■■□□□ 1.48
SUDS3-204ENST00000543473 CCDC144AA2RUR9 1427 aa24.29■■□□□ 1.48
SUDS3-204ENST00000543473 WASHC2AQ641Q2 1341 aa24.29■■□□□ 1.48
SUDS3-204ENST00000543473 PRDM2Q13029 1718 aa24.29■■□□□ 1.48
SUDS3-204ENST00000543473 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
SUDS3-204ENST00000543473 PANK3Q9H999 370 aa24.28■■□□□ 1.48
SUDS3-204ENST00000543473 DRC7Q8IY82 874 aa24.28■■□□□ 1.48
SUDS3-204ENST00000543473 CNTLNQ9NXG0 1405 aa24.28■■□□□ 1.48
SUDS3-204ENST00000543473 KIF7Q2M1P5 1343 aa24.27■■□□□ 1.48
SUDS3-204ENST00000543473 OS9Q13438 667 aaPredicted RBP24.26■■□□□ 1.47
SUDS3-204ENST00000543473 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
SUDS3-204ENST00000543473 ANO8Q9HCE9 1232 aaPredicted RBP24.26■■□□□ 1.47
SUDS3-204ENST00000543473 SYAP1Q96A49 352 aaPredicted RBP24.26■■□□□ 1.47
SUDS3-204ENST00000543473 FGD1P98174 961 aa24.25■■□□□ 1.47
SUDS3-204ENST00000543473 IL27Q8NEV9 243 aa24.25■■□□□ 1.47
SUDS3-204ENST00000543473 PRG4Q92954 1404 aaPredicted RBP24.25■■□□□ 1.47
SUDS3-204ENST00000543473 CGNL1Q0VF96 1302 aa24.24■■□□□ 1.47
SUDS3-204ENST00000543473 HDGFL2Q7Z4V5 671 aaPredicted RBP24.22■■□□□ 1.47
SUDS3-204ENST00000543473 FYCO1Q9BQS8 1478 aa24.22■■□□□ 1.47
SUDS3-204ENST00000543473 COG6Q9Y2V7 657 aa24.21■■□□□ 1.47
SUDS3-204ENST00000543473 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
SUDS3-204ENST00000543473 EIF3AQ14152 1382 aaKnown RBP24.21■■□□□ 1.47
SUDS3-204ENST00000543473 E9PSI1 815 aa24.19■■□□□ 1.46
SUDS3-204ENST00000543473 UACAQ9BZF9 1416 aa24.19■■□□□ 1.46
SUDS3-204ENST00000543473 MSH5O43196 834 aa24.19■■□□□ 1.46
SUDS3-204ENST00000543473 BRPF3Q9ULD4 1205 aa24.19■■□□□ 1.46
SUDS3-204ENST00000543473 DDX49Q9Y6V7 483 aaKnown RBP24.18■■□□□ 1.46
SUDS3-204ENST00000543473 TRAK1Q9UPV9 953 aa24.17■■□□□ 1.46
SUDS3-204ENST00000543473 SKOR2Q2VWA4 1001 aaPredicted RBP24.17■■□□□ 1.46
SUDS3-204ENST00000543473 BCL2L13Q9BXK5 485 aa24.17■■□□□ 1.46
SUDS3-204ENST00000543473 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
SUDS3-204ENST00000543473 EFCAB5A4FU69 1503 aa24.16■■□□□ 1.46
SUDS3-204ENST00000543473 FAM69CQ0P6D2 419 aa24.16■■□□□ 1.46
SUDS3-204ENST00000543473 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
SUDS3-204ENST00000543473 AMER1Q5JTC6 1135 aaPredicted RBP24.15■■□□□ 1.46
SUDS3-204ENST00000543473 RRP7AQ9Y3A4 280 aaKnown RBP24.15■■□□□ 1.46
SUDS3-204ENST00000543473 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
SUDS3-204ENST00000543473 RRBP1Q9P2E9 1410 aaKnown RBP24.15■■□□□ 1.46
SUDS3-204ENST00000543473 ABCA10Q8WWZ4 1543 aa24.14■■□□□ 1.46
SUDS3-204ENST00000543473 CHMP5Q9NZZ3 219 aa24.14■■□□□ 1.45
SUDS3-204ENST00000543473 APAF1O14727 1248 aa24.13■■□□□ 1.45
SUDS3-204ENST00000543473 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
SUDS3-204ENST00000543473 NAP1L2Q9ULW6 460 aaPredicted RBP24.12■■□□□ 1.45
SUDS3-204ENST00000543473 KIAA1211Q6ZU35 1233 aa24.12■■□□□ 1.45
SUDS3-204ENST00000543473 EID1Q9Y6B2 187 aa24.11■■□□□ 1.45
SUDS3-204ENST00000543473 AFAP1Q8N556 730 aa24.11■■□□□ 1.45
SUDS3-204ENST00000543473 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
SUDS3-204ENST00000543473 TAOK2Q9UL54 1235 aa24.1■■□□□ 1.45
SUDS3-204ENST00000543473 ST18O60284 1047 aa24.09■■□□□ 1.45
SUDS3-204ENST00000543473 ZKSCAN2Q63HK3 967 aa24.07■■□□□ 1.44
SUDS3-204ENST00000543473 AKNAQ7Z591 1439 aa24.07■■□□□ 1.44
SUDS3-204ENST00000543473 FRAT2O75474 233 aaPredicted RBP24.07■■□□□ 1.44
SUDS3-204ENST00000543473 BACH2Q9BYV9 841 aa24.07■■□□□ 1.44
SUDS3-204ENST00000543473 VGFO15240 615 aaPredicted RBP24.05■■□□□ 1.44
SUDS3-204ENST00000543473 TERF2IPQ9NYB0 399 aa24.05■■□□□ 1.44
SUDS3-204ENST00000543473 FOXD4L5Q5VV16 416 aaPredicted RBP24.03■■□□□ 1.44
SUDS3-204ENST00000543473 FAM43AQ8N2R8 423 aa24.03■■□□□ 1.44
SUDS3-204ENST00000543473 FOXD4L4Q8WXT5 416 aaPredicted RBP24.03■■□□□ 1.44
SUDS3-204ENST00000543473 PHF14O94880 888 aa24.03■■□□□ 1.44
SUDS3-204ENST00000543473 NOL8Q76FK4 1167 aaKnown RBP24.03■■□□□ 1.44
SUDS3-204ENST00000543473 CDCA7LQ96GN5 454 aa24.03■■□□□ 1.44
SUDS3-204ENST00000543473 BRD4O60885 1362 aaPredicted RBP24.03■■□□□ 1.44
SUDS3-204ENST00000543473 ANKRD45Q5TZF3 282 aa24.02■■□□□ 1.44
SUDS3-204ENST00000543473 RTF1Q92541 710 aaKnown RBP24.02■■□□□ 1.44
SUDS3-204ENST00000543473 CCDC184Q52MB2 194 aa24.02■■□□□ 1.44
SUDS3-204ENST00000543473 ARHGAP5Q13017 1502 aa24.01■■□□□ 1.43
SUDS3-204ENST00000543473 NUTM2FA1L443 756 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms