RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 CPS1P31327 1500 aa29.66■■■□□ 2.34
RAP1B-229ENST00000543393 RTEL1-TNFRSF6BF6WH68 1400 aa29.66■■■□□ 2.34
RAP1B-229ENST00000543393 DHX29Q7Z478 1369 aaKnown RBP29.65■■■□□ 2.34
RAP1B-229ENST00000543393 FBXO31Q5XUX0 539 aaPredicted RBP29.65■■■□□ 2.34
RAP1B-229ENST00000543393 TNRQ92752 1358 aa29.64■■■□□ 2.34
RAP1B-229ENST00000543393 MED1Q15648 1581 aaPredicted RBP29.64■■■□□ 2.34
RAP1B-229ENST00000543393 TOM1O60784 492 aa29.64■■■□□ 2.34
RAP1B-229ENST00000543393 SHANK2Q9UPX8 1470 aa29.63■■■□□ 2.33
RAP1B-229ENST00000543393 KIF3BO15066 747 aa29.61■■■□□ 2.33
RAP1B-229ENST00000543393 PZPP20742 1482 aa29.61■■■□□ 2.33
RAP1B-229ENST00000543393 EHBP1L1Q8N3D4 1523 aa29.59■■■□□ 2.33
RAP1B-229ENST00000543393 KDM5DQ9BY66 1539 aa29.59■■■□□ 2.33
RAP1B-229ENST00000543393 ANKLE2Q86XL3 938 aa29.57■■■□□ 2.32
RAP1B-229ENST00000543393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.56■■■□□ 2.326e-8■□□□□ 11.2
RAP1B-229ENST00000543393 FAM135AQ9P2D6 1515 aa29.55■■■□□ 2.32
RAP1B-229ENST00000543393 VWDEQ8N2E2 1590 aa29.54■■■□□ 2.32
RAP1B-229ENST00000543393 CEP162Q5TB80 1403 aa29.54■■■□□ 2.32
RAP1B-229ENST00000543393 WASHC2CQ9Y4E1 1318 aa29.53■■■□□ 2.32
RAP1B-229ENST00000543393 CCDC141Q6ZP82 1450 aa29.53■■■□□ 2.32
RAP1B-229ENST00000543393 THEMISQ8N1K5 641 aaPredicted RBP29.52■■■□□ 2.32
RAP1B-229ENST00000543393 MIA2Q96PC5 1412 aa29.51■■■□□ 2.31
RAP1B-229ENST00000543393 UGGT1Q9NYU2 1555 aa29.5■■■□□ 2.31
RAP1B-229ENST00000543393 NLRP1Q9C000 1473 aa29.49■■■□□ 2.31
RAP1B-229ENST00000543393 NPHP4O75161 1426 aaPredicted RBP29.49■■■□□ 2.31
RAP1B-229ENST00000543393 MED14O60244 1454 aa29.48■■■□□ 2.31
RAP1B-229ENST00000543393 DEPDC5O75140 1603 aa29.48■■■□□ 2.31
RAP1B-229ENST00000543393 ALKQ9UM73 1620 aa29.48■■■□□ 2.31
RAP1B-229ENST00000543393 CAMSAP2Q08AD1 1489 aa29.47■■■□□ 2.31
RAP1B-229ENST00000543393 RSPH4AQ5TD94 716 aa29.45■■■□□ 2.31
RAP1B-229ENST00000543393 PHF23Q9BUL5 403 aaPredicted RBP29.43■■■□□ 2.3
RAP1B-229ENST00000543393 IQGAP1P46940 1657 aa29.43■■■□□ 2.3
RAP1B-229ENST00000543393 NCOA2Q15596 1464 aa29.42■■■□□ 2.3
RAP1B-229ENST00000543393 STRCP1A6NGW2 1772 aa29.39■■■□□ 2.3
RAP1B-229ENST00000543393 ARHGEF5Q12774 1597 aa29.36■■■□□ 2.29
RAP1B-229ENST00000543393 LRRC7Q96NW7 1537 aa29.35■■■□□ 2.29
RAP1B-229ENST00000543393 TSPY4P0CV99 314 aa29.35■■■□□ 2.29
RAP1B-229ENST00000543393 TSPY10P0CW01 314 aa29.35■■■□□ 2.29
RAP1B-229ENST00000543393 SENP3Q9H4L4 574 aaPredicted RBP29.35■■■□□ 2.29
RAP1B-229ENST00000543393 RNF17Q9BXT8 1623 aaKnown RBP29.33■■■□□ 2.29
RAP1B-229ENST00000543393 ABCC3O15438 1527 aa29.32■■■□□ 2.28
RAP1B-229ENST00000543393 ZC3H13Q5T200 1668 aaKnown RBP29.31■■■□□ 2.28
RAP1B-229ENST00000543393 SYNMO15061 1565 aa29.3■■■□□ 2.28
RAP1B-229ENST00000543393 ERVK-7P63135 1459 aa29.28■■■□□ 2.28
RAP1B-229ENST00000543393 CFAP65Q6ZU64 1925 aaKnown RBP29.24■■■□□ 2.27
RAP1B-229ENST00000543393 UBR1Q8IWV7 1749 aa29.24■■■□□ 2.27
RAP1B-229ENST00000543393 MAST1Q9Y2H9 1570 aa29.23■■■□□ 2.27
RAP1B-229ENST00000543393 EIF2AK4Q9P2K8 1649 aaKnown RBP29.23■■■□□ 2.27
RAP1B-229ENST00000543393 MROH1Q8NDA8 1641 aa29.21■■■□□ 2.27
RAP1B-229ENST00000543393 CEP152O94986 1710 aa29.21■■■□□ 2.27
RAP1B-229ENST00000543393 SCAF11Q99590 1463 aaKnown RBP29.2■■■□□ 2.26
RAP1B-229ENST00000543393 LTKP29376 864 aa29.16■■■□□ 2.26
RAP1B-229ENST00000543393 RGS17Q9UGC6 210 aaPredicted RBP29.16■■■□□ 2.26
RAP1B-229ENST00000543393 XIRP1Q702N8 1843 aaKnown RBP29.15■■■□□ 2.26
RAP1B-229ENST00000543393 TXNDC2Q86VQ3 553 aa29.14■■■□□ 2.26
RAP1B-229ENST00000543393 ARHGAP23Q9P227 1491 aa29.14■■■□□ 2.26
RAP1B-229ENST00000543393 SLIT1O75093 1534 aa29.13■■■□□ 2.25
RAP1B-229ENST00000543393 LRRC9Q6ZRR7 1453 aa29.12■■■□□ 2.25
RAP1B-229ENST00000543393 DUOX2Q9NRD8 1548 aa29.09■■■□□ 2.25
RAP1B-229ENST00000543393 ARHGAP31Q2M1Z3 1444 aa29.06■■■□□ 2.24
RAP1B-229ENST00000543393 EID1Q9Y6B2 187 aa29.06■■■□□ 2.24
RAP1B-229ENST00000543393 PRDM15P57071 1507 aaPredicted RBP29.04■■■□□ 2.24
RAP1B-229ENST00000543393 FAM135BQ49AJ0 1406 aa29.03■■■□□ 2.24
RAP1B-229ENST00000543393 MYOM3Q5VTT5 1437 aa29.03■■■□□ 2.24
RAP1B-229ENST00000543393 PIK3C2BO00750 1634 aa29.02■■■□□ 2.24
RAP1B-229ENST00000543393 KANK4Q5T7N3 995 aaPredicted RBP29.01■■■□□ 2.23
RAP1B-229ENST00000543393 VPS8Q8N3P4 1428 aa29■■■□□ 2.23
RAP1B-229ENST00000543393 TMEM2Q9UHN6 1383 aa29■■■□□ 2.23
RAP1B-229ENST00000543393 KIF15Q9NS87 1388 aa28.99■■■□□ 2.23
RAP1B-229ENST00000543393 TMEM94Q12767 1356 aa28.98■■■□□ 2.23
RAP1B-229ENST00000543393 STAG3Q9UJ98 1225 aa28.97■■■□□ 2.23
RAP1B-229ENST00000543393 ERBINQ96RT1 1412 aa28.96■■■□□ 2.23
RAP1B-229ENST00000543393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.96■■■□□ 2.23
RAP1B-229ENST00000543393 POTEAQ6S8J7 498 aa28.95■■■□□ 2.22
RAP1B-229ENST00000543393 RRP7BPQ9NSQ0 103 aa28.95■■■□□ 2.22
RAP1B-229ENST00000543393 ROBO1Q9Y6N7 1651 aa28.93■■■□□ 2.22
RAP1B-229ENST00000543393 KCNA6P17658 529 aa28.92■■■□□ 2.22
RAP1B-229ENST00000543393 MAP3K1Q13233 1512 aa28.92■■■□□ 2.22
RAP1B-229ENST00000543393 EFCAB6Q5THR3 1501 aa28.92■■■□□ 2.22
RAP1B-229ENST00000543393 CROCC2H7BZ55 1655 aa28.92■■■□□ 2.22
RAP1B-229ENST00000543393 KDM5AP29375 1690 aaKnown RBP28.92■■■□□ 2.22
RAP1B-229ENST00000543393 ABCC5O15440 1437 aa28.91■■■□□ 2.22
RAP1B-229ENST00000543393 RBM33Q96EV2 1170 aaKnown RBP28.9■■■□□ 2.22
RAP1B-229ENST00000543393 TET3O43151 1660 aa28.89■■■□□ 2.22
RAP1B-229ENST00000543393 IDI1Q13907 227 aa28.89■■■□□ 2.22
RAP1B-229ENST00000543393 PROSER2Q86WR7 435 aaPredicted RBP28.89■■■□□ 2.22
RAP1B-229ENST00000543393 SLC26A8Q96RN1 970 aa28.89■■■□□ 2.22
RAP1B-229ENST00000543393 KANK1Q14678 1352 aa28.88■■■□□ 2.21
RAP1B-229ENST00000543393 PTPN23Q9H3S7 1636 aa28.83■■■□□ 2.21
RAP1B-229ENST00000543393 LMTK2Q8IWU2 1503 aa28.83■■■□□ 2.21
RAP1B-229ENST00000543393 NWD1Q149M9 1564 aa28.81■■■□□ 2.2
RAP1B-229ENST00000543393 NKTRP30414 1462 aaKnown RBP28.81■■■□□ 2.2
RAP1B-229ENST00000543393 DAPK1P53355 1430 aa28.81■■■□□ 2.2
RAP1B-229ENST00000543393 ADGRB3O60242 1522 aa28.79■■■□□ 2.2
RAP1B-229ENST00000543393 NOS1P29475 1434 aa28.78■■■□□ 2.2
RAP1B-229ENST00000543393 MSH6P52701 1360 aa28.78■■■□□ 2.2
RAP1B-229ENST00000543393 PHLPP1O60346 1717 aa28.77■■■□□ 2.2
RAP1B-229ENST00000543393 SETD1AO15047 1707 aaKnown RBP28.77■■■□□ 2.2
RAP1B-229ENST00000543393 LOC105371045A0A1W2PR82 267 aa28.76■■■□□ 2.19
RAP1B-229ENST00000543393 BCANQ96GW7 911 aa28.75■■■□□ 2.19
RAP1B-229ENST00000543393 SLAIN2Q9P270 581 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms