RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 NISCHQ9Y2I1 1504 aa46.65■■■■■ 5.06
RAP1B-229ENST00000543393 ABCC9O60706 1549 aa42.67■■■■■ 4.42
RAP1B-229ENST00000543393 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
RAP1B-229ENST00000543393 DNAJC5BQ9UF47 199 aa40.55■■■■■ 4.08
RAP1B-229ENST00000543393 RB1CC1Q8TDY2 1594 aa40.35■■■■■ 4.05
RAP1B-229ENST00000543393 NACADO15069 1562 aa39.93■■■■□ 3.98
RAP1B-229ENST00000543393 DCAF8L2P0C7V8 631 aa39.65■■■■□ 3.94
RAP1B-229ENST00000543393 PABPN1Q86U42 306 aaKnown RBP eCLIP39.65■■■■□ 3.94
RAP1B-229ENST00000543393 UNC13AQ9UPW8 1703 aa39.48■■■■□ 3.91
RAP1B-229ENST00000543393 BICRAQ9NZM4 1560 aa39.21■■■■□ 3.87
RAP1B-229ENST00000543393 MYO15BQ96JP2 1530 aa39.19■■■■□ 3.86
RAP1B-229ENST00000543393 SHROOM4Q9ULL8 1493 aa38.59■■■■□ 3.77
RAP1B-229ENST00000543393 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
RAP1B-229ENST00000543393 CC2D2AQ9P2K1 1620 aa38.52■■■■□ 3.76
RAP1B-229ENST00000543393 CECR2Q9BXF3 1484 aa38.49■■■■□ 3.75
RAP1B-229ENST00000543393 DCAF1Q9Y4B6 1507 aa38.48■■■■□ 3.75
RAP1B-229ENST00000543393 SCRIBQ14160 1630 aa38.34■■■■□ 3.73
RAP1B-229ENST00000543393 EIF4G1Q04637 1599 aaKnown RBP38.3■■■■□ 3.72
RAP1B-229ENST00000543393 DNAJC5Q9H3Z4 198 aa37.61■■■■□ 3.61
RAP1B-229ENST00000543393 CUX2O14529 1486 aa36.99■■■■□ 3.51
RAP1B-229ENST00000543393 NCAPD3P42695 1498 aa36.88■■■■□ 3.49
RAP1B-229ENST00000543393 ERCC6Q03468 1493 aa36.88■■■■□ 3.49
RAP1B-229ENST00000543393 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
RAP1B-229ENST00000543393 SMARCA2P51531 1590 aa36.55■■■■□ 3.44
RAP1B-229ENST00000543393 HMGXB3Q12766 1538 aa36.54■■■■□ 3.44
RAP1B-229ENST00000543393 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
RAP1B-229ENST00000543393 NESP48681 1621 aa36.51■■■■□ 3.43
RAP1B-229ENST00000543393 BAZ1BQ9UIG0 1483 aaKnown RBP36.31■■■■□ 3.4
RAP1B-229ENST00000543393 BAZ1AQ9NRL2 1556 aaPredicted RBP36.24■■■■□ 3.39
RAP1B-229ENST00000543393 THOC2Q8NI27 1593 aaKnown RBP36.23■■■■□ 3.39
RAP1B-229ENST00000543393 PEG3Q9GZU2 1588 aa36.15■■■■□ 3.38
RAP1B-229ENST00000543393 LAMC3Q9Y6N6 1575 aa36.15■■■■□ 3.38
RAP1B-229ENST00000543393 KIF21AQ7Z4S6 1674 aa36.01■■■■□ 3.36
RAP1B-229ENST00000543393 MROH2BQ7Z745 1585 aa35.96■■■■□ 3.35
RAP1B-229ENST00000543393 PDS5BQ9NTI5 1447 aa35.95■■■■□ 3.35
RAP1B-229ENST00000543393 TRIM41Q8WV44 630 aa35.76■■■■□ 3.32
RAP1B-229ENST00000543393 CADPSQ9ULU8 1353 aa35.74■■■■□ 3.31
RAP1B-229ENST00000543393 MRC2Q9UBG0 1479 aa35.67■■■■□ 3.3
RAP1B-229ENST00000543393 WDR62O43379 1518 aa35.61■■■■□ 3.29
RAP1B-229ENST00000543393 WIZO95785 1651 aa35.51■■■■□ 3.28
RAP1B-229ENST00000543393 CEP164Q9UPV0 1460 aa35.42■■■■□ 3.26
RAP1B-229ENST00000543393 FANCD2Q9BXW9 1451 aa35.34■■■■□ 3.25
RAP1B-229ENST00000543393 OSCARQ8IYS5 282 aa35.22■■■■□ 3.23
RAP1B-229ENST00000543393 CFTRP13569 1480 aa35.22■■■■□ 3.23
RAP1B-229ENST00000543393 URB2Q14146 1524 aaKnown RBP35.09■■■■□ 3.21
RAP1B-229ENST00000543393 RSF1Q96T23 1441 aaPredicted RBP35■■■■□ 3.19
RAP1B-229ENST00000543393 TOP2AP11388 1531 aaKnown RBP34.99■■■■□ 3.19
RAP1B-229ENST00000543393 RIMBP3CA6NJZ7 1639 aa34.83■■■■□ 3.17
RAP1B-229ENST00000543393 RIMBP3BA6NNM3 1639 aa34.83■■■■□ 3.17
RAP1B-229ENST00000543393 RIMBP3Q9UFD9 1639 aa34.83■■■■□ 3.17
RAP1B-229ENST00000543393 PRDM2Q13029 1718 aa34.82■■■■□ 3.16
RAP1B-229ENST00000543393 ZNF608Q9ULD9 1512 aaPredicted RBP34.76■■■■□ 3.15
RAP1B-229ENST00000543393 IFT140Q96RY7 1462 aa34.73■■■■□ 3.15
RAP1B-229ENST00000543393 ARHGEF11O15085 1522 aa34.65■■■■□ 3.14
RAP1B-229ENST00000543393 CCDC88BA6NC98 1476 aa34.62■■■■□ 3.13
RAP1B-229ENST00000543393 TOPBP1Q92547 1522 aa34.6■■■■□ 3.13
RAP1B-229ENST00000543393 EIF4G3O43432 1585 aaKnown RBP34.53■■■■□ 3.12
RAP1B-229ENST00000543393 ABCC8Q09428 1581 aa34.48■■■■□ 3.11
RAP1B-229ENST00000543393 CYB5RLQ6IPT4 315 aa34.45■■■■□ 3.11
RAP1B-229ENST00000543393 DNMBPQ6XZF7 1577 aa34.42■■■■□ 3.1
RAP1B-229ENST00000543393 CHD1O14646 1710 aa34.38■■■■□ 3.09
RAP1B-229ENST00000543393 AQRO60306 1485 aaKnown RBP eCLIP34.37■■■■□ 3.091e-6■■■■□ 26.1
RAP1B-229ENST00000543393 TARBP1Q13395 1621 aaKnown RBP34.35■■■■□ 3.09
RAP1B-229ENST00000543393 ARAP1Q96P48 1450 aa34.28■■■■□ 3.08
RAP1B-229ENST00000543393 FBLN2P98095 1184 aa34.27■■■■□ 3.08
RAP1B-229ENST00000543393 TRHP20396 242 aaPredicted RBP34.25■■■■□ 3.07
RAP1B-229ENST00000543393 POLA1P09884 1462 aaPredicted RBP34.21■■■■□ 3.07
RAP1B-229ENST00000543393 RAD54L2Q9Y4B4 1467 aa34.12■■■■□ 3.05
RAP1B-229ENST00000543393 TDRD9Q8NDG6 1382 aaKnown RBP34.07■■■■□ 3.04
RAP1B-229ENST00000543393 SOGA1O94964 1423 aa34.05■■■■□ 3.04
RAP1B-229ENST00000543393 SNAPC4Q5SXM2 1469 aa34■■■■□ 3.03
RAP1B-229ENST00000543393 CLASP1Q7Z460 1538 aa33.96■■■■□ 3.03
RAP1B-229ENST00000543393 FGD5Q6ZNL6 1462 aa33.93■■■■□ 3.02
RAP1B-229ENST00000543393 WDR97A6NE52 1622 aa33.93■■■■□ 3.02
RAP1B-229ENST00000543393 CHMP7Q8WUX9 453 aaPredicted RBP33.91■■■■□ 3.02
RAP1B-229ENST00000543393 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
RAP1B-229ENST00000543393 MAGI1Q96QZ7 1491 aaPredicted RBP33.87■■■■□ 3.01
RAP1B-229ENST00000543393 CUX1P39880 1505 aa33.82■■■■□ 3
RAP1B-229ENST00000543393 GRIN2BQ13224 1484 aa33.82■■■■□ 3
RAP1B-229ENST00000543393 SYNJ2O15056 1496 aa33.76■■■■□ 3
RAP1B-229ENST00000543393 PBRM1Q86U86 1689 aa33.66■■■□□ 2.98
RAP1B-229ENST00000543393 AEBP2Q6ZN18 517 aaPredicted RBP33.65■■■□□ 2.98
RAP1B-229ENST00000543393 GAPVD1Q14C86 1478 aa33.63■■■□□ 2.97
RAP1B-229ENST00000543393 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
RAP1B-229ENST00000543393 ABCA10Q8WWZ4 1543 aa33.5■■■□□ 2.95
RAP1B-229ENST00000543393 ERCC6L2Q5T890 1561 aa33.42■■■□□ 2.94
RAP1B-229ENST00000543393 GRIN2AQ12879 1464 aa33.38■■■□□ 2.93
RAP1B-229ENST00000543393 CEP170Q5SW79 1584 aa33.31■■■□□ 2.92
RAP1B-229ENST00000543393 ADAMTS12P58397 1594 aa33.3■■■□□ 2.92
RAP1B-229ENST00000543393 NUP160Q12769 1436 aa33.29■■■□□ 2.92
RAP1B-229ENST00000543393 WRNQ14191 1432 aaPredicted RBP eCLIP33.25■■■□□ 2.91
RAP1B-229ENST00000543393 SHROOM2Q13796 1616 aa33.21■■■□□ 2.91
RAP1B-229ENST00000543393 FHAD1B1AJZ9 1412 aa33.17■■■□□ 2.9
RAP1B-229ENST00000543393 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
RAP1B-229ENST00000543393 TOP2BQ02880 1626 aa33.11■■■□□ 2.89
RAP1B-229ENST00000543393 KIF13AQ9H1H9 1805 aa33.1■■■□□ 2.89
RAP1B-229ENST00000543393 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.88
RAP1B-229ENST00000543393 SUPT5HO00267 1087 aaKnown RBP33.05■■■□□ 2.88
RAP1B-229ENST00000543393 PRG4Q92954 1404 aaPredicted RBP33.02■■■□□ 2.88
RAP1B-229ENST00000543393 JPH4Q96JJ6 628 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms