RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 DUOX2Q9NRD8 1548 aa25.57■■□□□ 1.68
COPS7A-215ENST00000543155 CCDC144AA2RUR9 1427 aa25.56■■□□□ 1.68
COPS7A-215ENST00000543155 FAM9BQ8IZU0 186 aa25.56■■□□□ 1.68
COPS7A-215ENST00000543155 TRPM1Q7Z4N2 1603 aa25.56■■□□□ 1.68
COPS7A-215ENST00000543155 ZBED9Q6R2W3 1325 aa25.54■■□□□ 1.68
COPS7A-215ENST00000543155 DCAF11Q8TEB1 546 aa25.54■■□□□ 1.68
COPS7A-215ENST00000543155 PLCH2O75038 1416 aa25.54■■□□□ 1.68
COPS7A-215ENST00000543155 MAGI2Q86UL8 1455 aa25.53■■□□□ 1.68
COPS7A-215ENST00000543155 KDM2AQ9Y2K7 1162 aa25.52■■□□□ 1.68
COPS7A-215ENST00000543155 ERBINQ96RT1 1412 aa25.52■■□□□ 1.68
COPS7A-215ENST00000543155 ABCC1P33527 1531 aa25.51■■□□□ 1.67
COPS7A-215ENST00000543155 POLR3GLQ9BT43 218 aa25.51■■□□□ 1.67
COPS7A-215ENST00000543155 E9PCH4 1651 aa25.51■■□□□ 1.67
COPS7A-215ENST00000543155 PRAG1Q86YV5 1406 aa25.5■■□□□ 1.67
COPS7A-215ENST00000543155 PLA2R1Q13018 1463 aa25.49■■□□□ 1.67
COPS7A-215ENST00000543155 LAMC1P11047 1609 aa25.48■■□□□ 1.67
COPS7A-215ENST00000543155 ATP10AO60312 1499 aa25.46■■□□□ 1.67
COPS7A-215ENST00000543155 ST20-MTHFSA0A0A6YYL1 179 aa25.45■■□□□ 1.66
COPS7A-215ENST00000543155 EFCAB2Q5VUJ9 269 aa25.45■■□□□ 1.66
COPS7A-215ENST00000543155 EIF2AK4Q9P2K8 1649 aaKnown RBP25.45■■□□□ 1.66
COPS7A-215ENST00000543155 A2MP01023 1474 aa25.44■■□□□ 1.66
COPS7A-215ENST00000543155 ARAP3Q8WWN8 1544 aa25.44■■□□□ 1.66
COPS7A-215ENST00000543155 ERICH6BQ5W0A0 696 aa25.43■■□□□ 1.66
COPS7A-215ENST00000543155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.43■■□□□ 1.66
COPS7A-215ENST00000543155 GPRASP1Q5JY77 1395 aa25.4■■□□□ 1.66
COPS7A-215ENST00000543155 KTN1Q86UP2 1357 aaKnown RBP25.39■■□□□ 1.66
COPS7A-215ENST00000543155 MYT1Q01538 1121 aa25.39■■□□□ 1.66
COPS7A-215ENST00000543155 PRDM15P57071 1507 aaPredicted RBP25.38■■□□□ 1.65
COPS7A-215ENST00000543155 TRAPPC8Q9Y2L5 1435 aa25.38■■□□□ 1.65
COPS7A-215ENST00000543155 IRX6P78412 446 aaPredicted RBP25.35■■□□□ 1.65
COPS7A-215ENST00000543155 RTEL1-TNFRSF6BF6WH68 1400 aa25.34■■□□□ 1.65
COPS7A-215ENST00000543155 RGL3Q3MIN7 710 aa25.34■■□□□ 1.65
COPS7A-215ENST00000543155 ZFYVE16Q7Z3T8 1539 aa25.34■■□□□ 1.65
COPS7A-215ENST00000543155 CNGB1Q14028 1251 aaPredicted RBP25.33■■□□□ 1.64
COPS7A-215ENST00000543155 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
COPS7A-215ENST00000543155 SMG6Q86US8 1419 aaKnown RBP25.32■■□□□ 1.64
COPS7A-215ENST00000543155 COL17A1Q9UMD9 1497 aaPredicted RBP25.3■■□□□ 1.64
COPS7A-215ENST00000543155 RALBP1Q15311 655 aa25.3■■□□□ 1.64
COPS7A-215ENST00000543155 DEPDC5O75140 1603 aa25.3■■□□□ 1.64
COPS7A-215ENST00000543155 ABCA9Q8IUA7 1624 aa25.29■■□□□ 1.64
COPS7A-215ENST00000543155 BRD4O60885 1362 aaPredicted RBP25.29■■□□□ 1.64
COPS7A-215ENST00000543155 WDR7Q9Y4E6 1490 aa25.29■■□□□ 1.64
COPS7A-215ENST00000543155 MYBBP1AQ9BQG0 1328 aaKnown RBP25.29■■□□□ 1.64
COPS7A-215ENST00000543155 PNISRQ8TF01 805 aaKnown RBP25.28■■□□□ 1.64
COPS7A-215ENST00000543155 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
COPS7A-215ENST00000543155 NBPF1Q3BBV0 1214 aa25.28■■□□□ 1.64
COPS7A-215ENST00000543155 TMC1Q8TDI8 760 aa25.28■■□□□ 1.64
COPS7A-215ENST00000543155 PPP4R2Q9NY27 417 aa25.27■■□□□ 1.64
COPS7A-215ENST00000543155 TRPM2O94759 1503 aa25.26■■□□□ 1.63
COPS7A-215ENST00000543155 INO80Q9ULG1 1556 aaPredicted RBP25.26■■□□□ 1.63
COPS7A-215ENST00000543155 CEP152O94986 1710 aa25.26■■□□□ 1.63
COPS7A-215ENST00000543155 SPHKAPQ2M3C7 1700 aa25.26■■□□□ 1.63
COPS7A-215ENST00000543155 LRPPRCP42704 1394 aaKnown RBP25.24■■□□□ 1.63
COPS7A-215ENST00000543155 TET3O43151 1660 aa25.23■■□□□ 1.63
COPS7A-215ENST00000543155 MADDQ8WXG6 1647 aa25.23■■□□□ 1.63
COPS7A-215ENST00000543155 ATP7AQ04656 1500 aa25.23■■□□□ 1.63
COPS7A-215ENST00000543155 NUDCQ9Y266 331 aa25.21■■□□□ 1.63
COPS7A-215ENST00000543155 PARD3Q8TEW0 1356 aa25.21■■□□□ 1.63
COPS7A-215ENST00000543155 FANCAO15360 1455 aa25.21■■□□□ 1.63
COPS7A-215ENST00000543155 RBM19Q9Y4C8 960 aaKnown RBP25.21■■□□□ 1.63
COPS7A-215ENST00000543155 TESK2Q96S53 571 aa25.19■■□□□ 1.62
COPS7A-215ENST00000543155 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
COPS7A-215ENST00000543155 AFAP1Q8N556 730 aa25.18■■□□□ 1.62
COPS7A-215ENST00000543155 IQGAP1P46940 1657 aa25.18■■□□□ 1.62
COPS7A-215ENST00000543155 PTPRTO14522 1441 aa25.18■■□□□ 1.62
COPS7A-215ENST00000543155 CLTCL1P53675 1640 aa25.18■■□□□ 1.62
COPS7A-215ENST00000543155 VWDEQ8N2E2 1590 aa25.17■■□□□ 1.62
COPS7A-215ENST00000543155 WASHC2CQ9Y4E1 1318 aa25.14■■□□□ 1.62
COPS7A-215ENST00000543155 NLRP13Q86W25 1043 aa25.14■■□□□ 1.62
COPS7A-215ENST00000543155 PER1O15534 1290 aaPredicted RBP25.13■■□□□ 1.61
COPS7A-215ENST00000543155 ADGRL1O94910 1474 aa25.13■■□□□ 1.61
COPS7A-215ENST00000543155 TMF1P82094 1093 aa25.13■■□□□ 1.61
COPS7A-215ENST00000543155 KANK1Q14678 1352 aa25.13■■□□□ 1.61
COPS7A-215ENST00000543155 RNF123Q5XPI4 1314 aa25.12■■□□□ 1.61
COPS7A-215ENST00000543155 NEURL4Q96JN8 1562 aa25.11■■□□□ 1.61
COPS7A-215ENST00000543155 STAC3Q96MF2 364 aa25.1■■□□□ 1.61
COPS7A-215ENST00000543155 MROH1Q8NDA8 1641 aa25.08■■□□□ 1.61
COPS7A-215ENST00000543155 SCAPERQ9BY12 1400 aa25.08■■□□□ 1.61
COPS7A-215ENST00000543155 KIAA1210Q9ULL0 1709 aa25.07■■□□□ 1.6
COPS7A-215ENST00000543155 ASXL2Q76L83 1435 aa25.07■■□□□ 1.6
COPS7A-215ENST00000543155 ZMYM4Q5VZL5 1548 aa25.05■■□□□ 1.6
COPS7A-215ENST00000543155 SCAF11Q99590 1463 aaKnown RBP25.04■■□□□ 1.6
COPS7A-215ENST00000543155 B4GALNT3Q6L9W6 998 aa25.04■■□□□ 1.6
COPS7A-215ENST00000543155 PANK3Q9H999 370 aa25.04■■□□□ 1.6
COPS7A-215ENST00000543155 INSRP06213 1382 aa25.03■■□□□ 1.6
COPS7A-215ENST00000543155 KIDINS220Q9ULH0 1771 aa25.02■■□□□ 1.6
COPS7A-215ENST00000543155 SYNMO15061 1565 aa25.01■■□□□ 1.59
COPS7A-215ENST00000543155 KIF3BO15066 747 aa25■■□□□ 1.59
COPS7A-215ENST00000543155 EFCAB6Q5THR3 1501 aa25■■□□□ 1.59
COPS7A-215ENST00000543155 KIF1BO60333 1816 aa25■■□□□ 1.59
COPS7A-215ENST00000543155 CFAP74Q9C0B2 1584 aa24.99■■□□□ 1.59
COPS7A-215ENST00000543155 CC2D1BQ5T0F9 858 aaKnown RBP24.98■■□□□ 1.59
COPS7A-215ENST00000543155 MYT1LQ9UL68 1186 aa24.98■■□□□ 1.59
COPS7A-215ENST00000543155 ANP32EQ9BTT0 268 aa24.98■■□□□ 1.59
COPS7A-215ENST00000543155 SENP3-EIF4A1A0A087X0R7 540 aa24.97■■□□□ 1.59
COPS7A-215ENST00000543155 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
COPS7A-215ENST00000543155 BLMP54132 1417 aaPredicted RBP24.97■■□□□ 1.59
COPS7A-215ENST00000543155 MYOM2P54296 1465 aa24.97■■□□□ 1.59
COPS7A-215ENST00000543155 ZNF518AQ6AHZ1 1483 aa24.97■■□□□ 1.59
COPS7A-215ENST00000543155 IFT172Q9UG01 1749 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms