RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 NISCHQ9Y2I1 1504 aa39.5■■■■□ 3.91
COPS7A-215ENST00000543155 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
COPS7A-215ENST00000543155 ZCCHC6Q5VYS8 1495 aaKnown RBP33.42■■■□□ 2.94
COPS7A-215ENST00000543155 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
COPS7A-215ENST00000543155 DCAF1Q9Y4B6 1507 aa32.59■■■□□ 2.81
COPS7A-215ENST00000543155 SUPT5HO00267 1087 aaKnown RBP32.39■■■□□ 2.78
COPS7A-215ENST00000543155 DCAF8L2P0C7V8 631 aa32.39■■■□□ 2.78
COPS7A-215ENST00000543155 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.67
COPS7A-215ENST00000543155 ABCC9O60706 1549 aa31.53■■■□□ 2.64
COPS7A-215ENST00000543155 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
COPS7A-215ENST00000543155 SCRIBQ14160 1630 aa31.48■■■□□ 2.63
COPS7A-215ENST00000543155 NACADO15069 1562 aa31.32■■■□□ 2.6
COPS7A-215ENST00000543155 RSF1Q96T23 1441 aaPredicted RBP31.08■■■□□ 2.57
COPS7A-215ENST00000543155 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
COPS7A-215ENST00000543155 CECR2Q9BXF3 1484 aa30.68■■■□□ 2.5
COPS7A-215ENST00000543155 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
COPS7A-215ENST00000543155 WIZO95785 1651 aa30.47■■■□□ 2.47
COPS7A-215ENST00000543155 LOC105371045A0A1W2PR82 267 aa30.42■■■□□ 2.46
COPS7A-215ENST00000543155 BAZ1AQ9NRL2 1556 aaPredicted RBP30.42■■■□□ 2.46
COPS7A-215ENST00000543155 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
COPS7A-215ENST00000543155 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
COPS7A-215ENST00000543155 PCGF6Q9BYE7 350 aa30.19■■■□□ 2.42
COPS7A-215ENST00000543155 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
COPS7A-215ENST00000543155 HRCP23327 699 aa30.17■■■□□ 2.42
COPS7A-215ENST00000543155 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
COPS7A-215ENST00000543155 EIF4G1Q04637 1599 aaKnown RBP30.1■■■□□ 2.41
COPS7A-215ENST00000543155 BICRAQ9NZM4 1560 aa29.93■■■□□ 2.38
COPS7A-215ENST00000543155 SMARCA2P51531 1590 aa29.89■■■□□ 2.37
COPS7A-215ENST00000543155 FAM9AQ8IZU1 332 aaPredicted RBP29.89■■■□□ 2.37
COPS7A-215ENST00000543155 TRIM26Q12899 539 aaPredicted RBP29.84■■■□□ 2.37
COPS7A-215ENST00000543155 CCDC88BA6NC98 1476 aa29.84■■■□□ 2.37
COPS7A-215ENST00000543155 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.34
COPS7A-215ENST00000543155 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
COPS7A-215ENST00000543155 ABCC8Q09428 1581 aa29.64■■■□□ 2.34
COPS7A-215ENST00000543155 EHMT2Q96KQ7 1210 aa29.5■■■□□ 2.31
COPS7A-215ENST00000543155 PPARGC1BQ86YN6 1023 aaKnown RBP29.38■■■□□ 2.29
COPS7A-215ENST00000543155 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
COPS7A-215ENST00000543155 EEA1Q15075 1411 aa29.32■■■□□ 2.28
COPS7A-215ENST00000543155 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
COPS7A-215ENST00000543155 SOGA1O94964 1423 aa29.26■■■□□ 2.28
COPS7A-215ENST00000543155 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
COPS7A-215ENST00000543155 ZEB1P37275 1124 aaPredicted RBP29.18■■■□□ 2.26
COPS7A-215ENST00000543155 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
COPS7A-215ENST00000543155 TNIKQ9UKE5 1360 aa29.12■■■□□ 2.25
COPS7A-215ENST00000543155 RUSC2Q8N2Y8 1516 aa29.11■■■□□ 2.25
COPS7A-215ENST00000543155 CEP162Q5TB80 1403 aa29.1■■■□□ 2.25
COPS7A-215ENST00000543155 CSRNP3Q8WYN3 585 aa29.09■■■□□ 2.25
COPS7A-215ENST00000543155 GOLGA3Q08378 1498 aa29.03■■■□□ 2.24
COPS7A-215ENST00000543155 HMGXB3Q12766 1538 aa28.97■■■□□ 2.23
COPS7A-215ENST00000543155 KIF21BO75037 1637 aa28.96■■■□□ 2.23
COPS7A-215ENST00000543155 CEP164Q9UPV0 1460 aa28.9■■■□□ 2.22
COPS7A-215ENST00000543155 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
COPS7A-215ENST00000543155 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
COPS7A-215ENST00000543155 UBTFP17480 764 aaKnown RBP28.87■■■□□ 2.21
COPS7A-215ENST00000543155 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
COPS7A-215ENST00000543155 RAPGEF2Q9Y4G8 1499 aa28.62■■■□□ 2.17
COPS7A-215ENST00000543155 CLIP1P30622 1438 aa28.61■■■□□ 2.17
COPS7A-215ENST00000543155 CFTRP13569 1480 aa28.58■■■□□ 2.17
COPS7A-215ENST00000543155 PRDM2Q13029 1718 aa28.58■■■□□ 2.17
COPS7A-215ENST00000543155 CUX1P39880 1505 aa28.55■■■□□ 2.16
COPS7A-215ENST00000543155 TTBK1Q5TCY1 1321 aaPredicted RBP28.54■■■□□ 2.16
COPS7A-215ENST00000543155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.54■■■□□ 2.16
COPS7A-215ENST00000543155 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
COPS7A-215ENST00000543155 CCER1Q8TC90 406 aaPredicted RBP28.52■■■□□ 2.16
COPS7A-215ENST00000543155 VPS8Q8N3P4 1428 aa28.51■■■□□ 2.15
COPS7A-215ENST00000543155 PRXQ9BXM0 1461 aa28.45■■■□□ 2.15
COPS7A-215ENST00000543155 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
COPS7A-215ENST00000543155 CC2D2AQ9P2K1 1620 aa28.26■■■□□ 2.11
COPS7A-215ENST00000543155 APLP2Q06481 763 aa28.25■■■□□ 2.11
COPS7A-215ENST00000543155 CADPSQ9ULU8 1353 aa28.25■■■□□ 2.11
COPS7A-215ENST00000543155 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
COPS7A-215ENST00000543155 RANGAP1P46060 587 aaPredicted RBP28.18■■■□□ 2.1
COPS7A-215ENST00000543155 CUX2O14529 1486 aa28.09■■■□□ 2.09
COPS7A-215ENST00000543155 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
COPS7A-215ENST00000543155 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
COPS7A-215ENST00000543155 IGF1RP08069 1367 aa28■■■□□ 2.07
COPS7A-215ENST00000543155 ARHGAP35Q9NRY4 1499 aa28■■■□□ 2.07
COPS7A-215ENST00000543155 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
COPS7A-215ENST00000543155 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
COPS7A-215ENST00000543155 CARMIL1Q5VZK9 1371 aa27.89■■■□□ 2.06
COPS7A-215ENST00000543155 KANK4Q5T7N3 995 aaPredicted RBP27.85■■■□□ 2.05
COPS7A-215ENST00000543155 DIEXFQ68CQ4 756 aaKnown RBP27.84■■■□□ 2.05
COPS7A-215ENST00000543155 RRBP1Q9P2E9 1410 aaKnown RBP27.83■■■□□ 2.05
COPS7A-215ENST00000543155 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
COPS7A-215ENST00000543155 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
COPS7A-215ENST00000543155 MAP3K1Q13233 1512 aa27.77■■■□□ 2.04
COPS7A-215ENST00000543155 POLA1P09884 1462 aaPredicted RBP27.77■■■□□ 2.04
COPS7A-215ENST00000543155 NESP48681 1621 aa27.77■■■□□ 2.04
COPS7A-215ENST00000543155 LAMC3Q9Y6N6 1575 aa27.76■■■□□ 2.04
COPS7A-215ENST00000543155 ZNF316A6NFI3 1004 aaPredicted RBP27.76■■■□□ 2.03
COPS7A-215ENST00000543155 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
COPS7A-215ENST00000543155 CUL7Q14999 1698 aa27.73■■■□□ 2.03
COPS7A-215ENST00000543155 RAD54L2Q9Y4B4 1467 aa27.73■■■□□ 2.03
COPS7A-215ENST00000543155 CLSPNQ9HAW4 1339 aa27.68■■■□□ 2.02
COPS7A-215ENST00000543155 WDR97A6NE52 1622 aa27.68■■■□□ 2.02
COPS7A-215ENST00000543155 CCNB3Q8WWL7 1395 aa27.66■■■□□ 2.02
COPS7A-215ENST00000543155 FHAD1B1AJZ9 1412 aa27.64■■■□□ 2.02
COPS7A-215ENST00000543155 CFAP43Q8NDM7 1665 aa27.64■■■□□ 2.02
COPS7A-215ENST00000543155 CTTNBP2Q8WZ74 1663 aa27.63■■■□□ 2.01
COPS7A-215ENST00000543155 DHX57Q6P158 1386 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms