RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 PLXNC1O60486 1568 aa19.37■□□□□ 0.69
PDE3A-202ENST00000542675 NPATQ14207 1427 aa19.37■□□□□ 0.69
PDE3A-202ENST00000542675 SOCS7O14512 581 aa19.37■□□□□ 0.69
PDE3A-202ENST00000542675 ZNF335Q9H4Z2 1342 aaPredicted RBP19.36■□□□□ 0.69
PDE3A-202ENST00000542675 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
PDE3A-202ENST00000542675 A2MP01023 1474 aa19.34■□□□□ 0.69
PDE3A-202ENST00000542675 IQSEC2Q5JU85 1478 aa19.34■□□□□ 0.69
PDE3A-202ENST00000542675 PTPRKQ15262 1439 aa19.33■□□□□ 0.68
PDE3A-202ENST00000542675 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
PDE3A-202ENST00000542675 GGT6Q6P531 493 aa19.32■□□□□ 0.68
PDE3A-202ENST00000542675 CFDP1Q9UEE9 299 aaPredicted RBP19.32■□□□□ 0.68
PDE3A-202ENST00000542675 ADGBQ8N7X0 1667 aa19.32■□□□□ 0.68
PDE3A-202ENST00000542675 ZNF644Q9H582 1327 aaPredicted RBP19.31■□□□□ 0.68
PDE3A-202ENST00000542675 DSG3P32926 999 aa19.31■□□□□ 0.68
PDE3A-202ENST00000542675 KIAA1107Q9UPP5 1409 aa19.3■□□□□ 0.68
PDE3A-202ENST00000542675 CCNB3Q8WWL7 1395 aa19.3■□□□□ 0.68
PDE3A-202ENST00000542675 TIAM1Q13009 1591 aa19.28■□□□□ 0.68
PDE3A-202ENST00000542675 TCOF1Q13428 1488 aaKnown RBP19.28■□□□□ 0.68
PDE3A-202ENST00000542675 PLEKHH2Q8IVE3 1493 aa19.28■□□□□ 0.68
PDE3A-202ENST00000542675 UBAP1LF5GYI3 381 aa19.27■□□□□ 0.68
PDE3A-202ENST00000542675 PLA2R1Q13018 1463 aa19.27■□□□□ 0.67
PDE3A-202ENST00000542675 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
PDE3A-202ENST00000542675 APLP2Q06481 763 aa19.25■□□□□ 0.67
PDE3A-202ENST00000542675 MTUS2Q5JR59 1369 aa19.24■□□□□ 0.67
PDE3A-202ENST00000542675 PKD2Q13563 968 aa19.24■□□□□ 0.67
PDE3A-202ENST00000542675 MBD5Q9P267 1494 aa19.23■□□□□ 0.67
PDE3A-202ENST00000542675 POLR1AO95602 1720 aaPredicted RBP19.23■□□□□ 0.67
PDE3A-202ENST00000542675 A2ML1A8K2U0 1454 aa19.21■□□□□ 0.67
PDE3A-202ENST00000542675 FBXO31Q5XUX0 539 aaPredicted RBP19.2■□□□□ 0.66
PDE3A-202ENST00000542675 NEURL4Q96JN8 1562 aa19.19■□□□□ 0.66
PDE3A-202ENST00000542675 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
PDE3A-202ENST00000542675 EHBP1L1Q8N3D4 1523 aa19.18■□□□□ 0.66
PDE3A-202ENST00000542675 ATF5Q9Y2D1 282 aaPredicted RBP19.17■□□□□ 0.66
PDE3A-202ENST00000542675 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
PDE3A-202ENST00000542675 ABCB7O75027 752 aa19.15■□□□□ 0.66
PDE3A-202ENST00000542675 CFAP65Q6ZU64 1925 aaKnown RBP19.15■□□□□ 0.66
PDE3A-202ENST00000542675 KIF3BO15066 747 aa19.14■□□□□ 0.65
PDE3A-202ENST00000542675 RTEL1-TNFRSF6BF6WH68 1400 aa19.14■□□□□ 0.65
PDE3A-202ENST00000542675 TNRQ92752 1358 aa19.13■□□□□ 0.65
PDE3A-202ENST00000542675 CEP162Q5TB80 1403 aa19.12■□□□□ 0.65
PDE3A-202ENST00000542675 HSPA1LP34931 641 aa19.12■□□□□ 0.65
PDE3A-202ENST00000542675 PIP4K2BP78356 416 aa19.12■□□□□ 0.65
PDE3A-202ENST00000542675 CAMSAP2Q08AD1 1489 aa19.11■□□□□ 0.65
PDE3A-202ENST00000542675 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
PDE3A-202ENST00000542675 PZPP20742 1482 aa19.1■□□□□ 0.65
PDE3A-202ENST00000542675 CCDC141Q6ZP82 1450 aa19.1■□□□□ 0.65
PDE3A-202ENST00000542675 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
PDE3A-202ENST00000542675 STRCP1A6NGW2 1772 aa19.09■□□□□ 0.65
PDE3A-202ENST00000542675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.09■□□□□ 0.654e-10■■■■■ 27.4
PDE3A-202ENST00000542675 MED1Q15648 1581 aaPredicted RBP19.09■□□□□ 0.65
PDE3A-202ENST00000542675 VWDEQ8N2E2 1590 aa19.09■□□□□ 0.65
PDE3A-202ENST00000542675 SHANK2Q9UPX8 1470 aa19.09■□□□□ 0.65
PDE3A-202ENST00000542675 ALKQ9UM73 1620 aa19.07■□□□□ 0.64
PDE3A-202ENST00000542675 CPS1P31327 1500 aa19.06■□□□□ 0.64
PDE3A-202ENST00000542675 WASHC2CQ9Y4E1 1318 aa19.05■□□□□ 0.64
PDE3A-202ENST00000542675 MIA2Q96PC5 1412 aa19.04■□□□□ 0.64
PDE3A-202ENST00000542675 UGGT1Q9NYU2 1555 aa19.04■□□□□ 0.64
PDE3A-202ENST00000542675 IQGAP1P46940 1657 aa19.03■□□□□ 0.64
PDE3A-202ENST00000542675 ARHGEF5Q12774 1597 aa19.02■□□□□ 0.64
PDE3A-202ENST00000542675 FAM135AQ9P2D6 1515 aa19.02■□□□□ 0.64
PDE3A-202ENST00000542675 ANKLE2Q86XL3 938 aa19.02■□□□□ 0.64
PDE3A-202ENST00000542675 DEPDC5O75140 1603 aa19.02■□□□□ 0.64
PDE3A-202ENST00000542675 CEP152O94986 1710 aa19.02■□□□□ 0.63
PDE3A-202ENST00000542675 NPHP4O75161 1426 aaPredicted RBP19.01■□□□□ 0.63
PDE3A-202ENST00000542675 TOM1O60784 492 aa19.01■□□□□ 0.63
PDE3A-202ENST00000542675 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
PDE3A-202ENST00000542675 NLRP1Q9C000 1473 aa19■□□□□ 0.63
PDE3A-202ENST00000542675 MED14O60244 1454 aa18.99■□□□□ 0.63
PDE3A-202ENST00000542675 THEMISQ8N1K5 641 aaPredicted RBP18.99■□□□□ 0.63
PDE3A-202ENST00000542675 ABCC3O15438 1527 aa18.99■□□□□ 0.63
PDE3A-202ENST00000542675 MROH1Q8NDA8 1641 aa18.97■□□□□ 0.63
PDE3A-202ENST00000542675 ZC3H13Q5T200 1668 aaKnown RBP18.96■□□□□ 0.63
PDE3A-202ENST00000542675 RSPH4AQ5TD94 716 aa18.96■□□□□ 0.63
PDE3A-202ENST00000542675 UBR1Q8IWV7 1749 aa18.96■□□□□ 0.63
PDE3A-202ENST00000542675 XIRP1Q702N8 1843 aaKnown RBP18.95■□□□□ 0.62
PDE3A-202ENST00000542675 MAST1Q9Y2H9 1570 aa18.94■□□□□ 0.62
PDE3A-202ENST00000542675 TSPY4P0CV99 314 aa18.94■□□□□ 0.62
PDE3A-202ENST00000542675 TSPY10P0CW01 314 aa18.94■□□□□ 0.62
PDE3A-202ENST00000542675 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
PDE3A-202ENST00000542675 ERVK-7P63135 1459 aa18.93■□□□□ 0.62
PDE3A-202ENST00000542675 EIF2AK4Q9P2K8 1649 aaKnown RBP18.92■□□□□ 0.62
PDE3A-202ENST00000542675 LRRC9Q6ZRR7 1453 aa18.91■□□□□ 0.62
PDE3A-202ENST00000542675 KANK4Q5T7N3 995 aaPredicted RBP18.89■□□□□ 0.61
PDE3A-202ENST00000542675 SYNMO15061 1565 aa18.89■□□□□ 0.61
PDE3A-202ENST00000542675 POLA2Q14181 598 aa18.88■□□□□ 0.61
PDE3A-202ENST00000542675 LTKP29376 864 aa18.86■□□□□ 0.61
PDE3A-202ENST00000542675 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
PDE3A-202ENST00000542675 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.61
PDE3A-202ENST00000542675 PIK3C2BO00750 1634 aa18.83■□□□□ 0.61
PDE3A-202ENST00000542675 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.6
PDE3A-202ENST00000542675 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
PDE3A-202ENST00000542675 DUOX2Q9NRD8 1548 aa18.82■□□□□ 0.6
PDE3A-202ENST00000542675 ARHGAP23Q9P227 1491 aa18.82■□□□□ 0.6
PDE3A-202ENST00000542675 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
PDE3A-202ENST00000542675 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
PDE3A-202ENST00000542675 SLIT1O75093 1534 aa18.8■□□□□ 0.6
PDE3A-202ENST00000542675 TXNDC2Q86VQ3 553 aa18.8■□□□□ 0.6
PDE3A-202ENST00000542675 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
PDE3A-202ENST00000542675 RGS17Q9UGC6 210 aaPredicted RBP18.79■□□□□ 0.6
PDE3A-202ENST00000542675 RRP7BPQ9NSQ0 103 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms