RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 ZNF142P52746 1687 aaPredicted RBP23.57■■□□□ 1.36
ITM2C-208ENST00000541852 LTBP4Q8N2S1 1624 aa23.56■■□□□ 1.36
ITM2C-208ENST00000541852 CEP170BQ9Y4F5 1589 aaPredicted RBP23.56■■□□□ 1.36
ITM2C-208ENST00000541852 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
ITM2C-208ENST00000541852 A2ML1A8K2U0 1454 aa23.54■■□□□ 1.36
ITM2C-208ENST00000541852 TCOF1Q13428 1488 aaKnown RBP23.53■■□□□ 1.36
ITM2C-208ENST00000541852 MIA2Q96PC5 1412 aa23.52■■□□□ 1.36
ITM2C-208ENST00000541852 TNRQ92752 1358 aa23.52■■□□□ 1.36
ITM2C-208ENST00000541852 KDM5DQ9BY66 1539 aa23.51■■□□□ 1.35
ITM2C-208ENST00000541852 APLP2Q06481 763 aa23.51■■□□□ 1.35
ITM2C-208ENST00000541852 THEMISQ8N1K5 641 aaPredicted RBP23.51■■□□□ 1.35
ITM2C-208ENST00000541852 PZPP20742 1482 aa23.5■■□□□ 1.35
ITM2C-208ENST00000541852 FBXO31Q5XUX0 539 aaPredicted RBP23.5■■□□□ 1.35
ITM2C-208ENST00000541852 KANK4Q5T7N3 995 aaPredicted RBP23.49■■□□□ 1.35
ITM2C-208ENST00000541852 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
ITM2C-208ENST00000541852 ZNF335Q9H4Z2 1342 aaPredicted RBP23.47■■□□□ 1.35
ITM2C-208ENST00000541852 DNMT1P26358 1616 aaKnown RBP23.46■■□□□ 1.35
ITM2C-208ENST00000541852 MYOM3Q5VTT5 1437 aa23.46■■□□□ 1.35
ITM2C-208ENST00000541852 MAST1Q9Y2H9 1570 aa23.44■■□□□ 1.34
ITM2C-208ENST00000541852 NLRP1Q9C000 1473 aa23.43■■□□□ 1.34
ITM2C-208ENST00000541852 UBAP1LF5GYI3 381 aa23.41■■□□□ 1.34
ITM2C-208ENST00000541852 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
ITM2C-208ENST00000541852 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
ITM2C-208ENST00000541852 EIF2AK4Q9P2K8 1649 aaKnown RBP23.37■■□□□ 1.33
ITM2C-208ENST00000541852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.36■■□□□ 1.33
ITM2C-208ENST00000541852 UGGT1Q9NYU2 1555 aa23.35■■□□□ 1.33
ITM2C-208ENST00000541852 DUOX2Q9NRD8 1548 aa23.35■■□□□ 1.33
ITM2C-208ENST00000541852 ZC3H13Q5T200 1668 aaKnown RBP23.35■■□□□ 1.33
ITM2C-208ENST00000541852 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.32
ITM2C-208ENST00000541852 ABCC3O15438 1527 aa23.33■■□□□ 1.32
ITM2C-208ENST00000541852 TOM1O60784 492 aa23.32■■□□□ 1.32
ITM2C-208ENST00000541852 CPS1P31327 1500 aa23.32■■□□□ 1.32
ITM2C-208ENST00000541852 MED14O60244 1454 aa23.3■■□□□ 1.32
ITM2C-208ENST00000541852 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
ITM2C-208ENST00000541852 KIF15Q9NS87 1388 aa23.3■■□□□ 1.32
ITM2C-208ENST00000541852 RRP7BPQ9NSQ0 103 aa23.3■■□□□ 1.32
ITM2C-208ENST00000541852 SPATA31D1Q6ZQQ2 1576 aa23.3■■□□□ 1.32
ITM2C-208ENST00000541852 DEPDC5O75140 1603 aa23.29■■□□□ 1.32
ITM2C-208ENST00000541852 ABCC5O15440 1437 aa23.28■■□□□ 1.32
ITM2C-208ENST00000541852 NPHP4O75161 1426 aaPredicted RBP23.28■■□□□ 1.32
ITM2C-208ENST00000541852 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
ITM2C-208ENST00000541852 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
ITM2C-208ENST00000541852 ERVK-7P63135 1459 aa23.26■■□□□ 1.31
ITM2C-208ENST00000541852 KANK1Q14678 1352 aa23.26■■□□□ 1.31
ITM2C-208ENST00000541852 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
ITM2C-208ENST00000541852 PTPN23Q9H3S7 1636 aa23.25■■□□□ 1.31
ITM2C-208ENST00000541852 ANKRD30AQ9BXX3 1397 aa23.24■■□□□ 1.31
ITM2C-208ENST00000541852 DAPK1P53355 1430 aa23.23■■□□□ 1.31
ITM2C-208ENST00000541852 FGD6Q6ZV73 1430 aa23.23■■□□□ 1.31
ITM2C-208ENST00000541852 MROH1Q8NDA8 1641 aa23.22■■□□□ 1.31
ITM2C-208ENST00000541852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.31
ITM2C-208ENST00000541852 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
ITM2C-208ENST00000541852 EID1Q9Y6B2 187 aa23.2■■□□□ 1.3
ITM2C-208ENST00000541852 ILDR2Q71H61 639 aa23.19■■□□□ 1.3
ITM2C-208ENST00000541852 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
ITM2C-208ENST00000541852 SCAF1Q9H7N4 1312 aaKnown RBP23.18■■□□□ 1.3
ITM2C-208ENST00000541852 SOCS7O14512 581 aa23.18■■□□□ 1.3
ITM2C-208ENST00000541852 TXNDC2Q86VQ3 553 aa23.18■■□□□ 1.3
ITM2C-208ENST00000541852 CEP152O94986 1710 aa23.18■■□□□ 1.3
ITM2C-208ENST00000541852 CROCC2H7BZ55 1655 aa23.18■■□□□ 1.3
ITM2C-208ENST00000541852 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
ITM2C-208ENST00000541852 IQGAP1P46940 1657 aa23.17■■□□□ 1.3
ITM2C-208ENST00000541852 PIP4K2BP78356 416 aa23.17■■□□□ 1.3
ITM2C-208ENST00000541852 STAG3Q9UJ98 1225 aa23.16■■□□□ 1.3
ITM2C-208ENST00000541852 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
ITM2C-208ENST00000541852 UBR1Q8IWV7 1749 aa23.13■■□□□ 1.29
ITM2C-208ENST00000541852 SCAF11Q99590 1463 aaKnown RBP23.13■■□□□ 1.29
ITM2C-208ENST00000541852 LTKP29376 864 aa23.12■■□□□ 1.29
ITM2C-208ENST00000541852 HSPA1LP34931 641 aa23.12■■□□□ 1.29
ITM2C-208ENST00000541852 SLIT1O75093 1534 aa23.12■■□□□ 1.29
ITM2C-208ENST00000541852 ARHGAP23Q9P227 1491 aa23.11■■□□□ 1.29
ITM2C-208ENST00000541852 LMTK2Q8IWU2 1503 aa23.1■■□□□ 1.29
ITM2C-208ENST00000541852 IDI1Q13907 227 aa23.09■■□□□ 1.29
ITM2C-208ENST00000541852 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
ITM2C-208ENST00000541852 SLC52A1Q9NWF4 448 aa23.09■■□□□ 1.29
ITM2C-208ENST00000541852 TMEM2Q9UHN6 1383 aa23.08■■□□□ 1.29
ITM2C-208ENST00000541852 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
ITM2C-208ENST00000541852 LRRC7Q96NW7 1537 aa23.06■■□□□ 1.28
ITM2C-208ENST00000541852 KDM5AP29375 1690 aaKnown RBP23.04■■□□□ 1.28
ITM2C-208ENST00000541852 SYNMO15061 1565 aa23.02■■□□□ 1.28
ITM2C-208ENST00000541852 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
ITM2C-208ENST00000541852 ANKRD50Q9ULJ7 1429 aa23.01■■□□□ 1.27
ITM2C-208ENST00000541852 PIK3C2BO00750 1634 aa23■■□□□ 1.27
ITM2C-208ENST00000541852 NOS1P29475 1434 aa23■■□□□ 1.27
ITM2C-208ENST00000541852 EFCAB6Q5THR3 1501 aa23■■□□□ 1.27
ITM2C-208ENST00000541852 RPRD2Q5VT52 1461 aaKnown RBP22.99■■□□□ 1.27
ITM2C-208ENST00000541852 STRCP1A6NGW2 1772 aa22.99■■□□□ 1.27
ITM2C-208ENST00000541852 KCNA6P17658 529 aa22.98■■□□□ 1.27
ITM2C-208ENST00000541852 ALKQ9UM73 1620 aa22.94■■□□□ 1.26
ITM2C-208ENST00000541852 BCANQ96GW7 911 aa22.92■■□□□ 1.26
ITM2C-208ENST00000541852 ROCK1Q13464 1354 aa22.91■■□□□ 1.26
ITM2C-208ENST00000541852 PROSER2Q86WR7 435 aaPredicted RBP22.91■■□□□ 1.26
ITM2C-208ENST00000541852 SLC26A8Q96RN1 970 aa22.91■■□□□ 1.26
ITM2C-208ENST00000541852 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
ITM2C-208ENST00000541852 ADGRB3O60242 1522 aa22.89■■□□□ 1.26
ITM2C-208ENST00000541852 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.89■■□□□ 1.25
ITM2C-208ENST00000541852 TET3O43151 1660 aa22.89■■□□□ 1.25
ITM2C-208ENST00000541852 MED1Q15648 1581 aaPredicted RBP22.89■■□□□ 1.25
ITM2C-208ENST00000541852 FAM135BQ49AJ0 1406 aa22.87■■□□□ 1.25
ITM2C-208ENST00000541852 PPP1R15AO75807 674 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms