RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 FAM135AQ9P2D6 1515 aa29.73■■■□□ 2.35
RAB35-204ENST00000540803 KDM5DQ9BY66 1539 aa29.72■■■□□ 2.35
RAB35-204ENST00000540803 DUOX2Q9NRD8 1548 aa29.71■■■□□ 2.35
RAB35-204ENST00000540803 PTPRKQ15262 1439 aa29.71■■■□□ 2.35
RAB35-204ENST00000540803 KIF15Q9NS87 1388 aa29.67■■■□□ 2.34
RAB35-204ENST00000540803 STRCQ7RTU9 1775 aa29.65■■■□□ 2.34
RAB35-204ENST00000540803 MROH1Q8NDA8 1641 aa29.65■■■□□ 2.34
RAB35-204ENST00000540803 MYO3AQ8NEV4 1616 aa29.65■■■□□ 2.34
RAB35-204ENST00000540803 WASHC2CQ9Y4E1 1318 aa29.64■■■□□ 2.34
RAB35-204ENST00000540803 RRP7BPQ9NSQ0 103 aa29.63■■■□□ 2.33
RAB35-204ENST00000540803 FAM50AQ14320 339 aaKnown RBP29.62■■■□□ 2.33
RAB35-204ENST00000540803 ZNF142P52746 1687 aaPredicted RBP29.62■■■□□ 2.33
RAB35-204ENST00000540803 ZC3H13Q5T200 1668 aaKnown RBP29.62■■■□□ 2.33
RAB35-204ENST00000540803 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
RAB35-204ENST00000540803 PZPP20742 1482 aa29.61■■■□□ 2.33
RAB35-204ENST00000540803 ABCC3O15438 1527 aa29.61■■■□□ 2.33
RAB35-204ENST00000540803 CHIC2Q9UKJ5 165 aa29.6■■■□□ 2.33
RAB35-204ENST00000540803 ANKRD30AQ9BXX3 1397 aa29.59■■■□□ 2.33
RAB35-204ENST00000540803 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
RAB35-204ENST00000540803 CEP152O94986 1710 aa29.57■■■□□ 2.32
RAB35-204ENST00000540803 ADGRL2O95490 1459 aa29.57■■■□□ 2.32
RAB35-204ENST00000540803 NCOA1Q15788 1441 aa29.57■■■□□ 2.32
RAB35-204ENST00000540803 CEP170BQ9Y4F5 1589 aaPredicted RBP29.56■■■□□ 2.32
RAB35-204ENST00000540803 DEPDC5O75140 1603 aa29.55■■■□□ 2.32
RAB35-204ENST00000540803 PRDM15P57071 1507 aaPredicted RBP29.55■■■□□ 2.32
RAB35-204ENST00000540803 FBXO31Q5XUX0 539 aaPredicted RBP29.54■■■□□ 2.32
RAB35-204ENST00000540803 CAMSAP1Q5T5Y3 1602 aa29.53■■■□□ 2.32
RAB35-204ENST00000540803 TNRQ92752 1358 aa29.51■■■□□ 2.31
RAB35-204ENST00000540803 A2ML1A8K2U0 1454 aa29.48■■■□□ 2.31
RAB35-204ENST00000540803 SPATA31D1Q6ZQQ2 1576 aa29.45■■■□□ 2.31
RAB35-204ENST00000540803 DMRT2Q9Y5R5 561 aa29.45■■■□□ 2.31
RAB35-204ENST00000540803 CFAP65Q6ZU64 1925 aaKnown RBP29.45■■■□□ 2.3
RAB35-204ENST00000540803 PTPRTO14522 1441 aa29.43■■■□□ 2.3
RAB35-204ENST00000540803 PLA2R1Q13018 1463 aa29.42■■■□□ 2.3
RAB35-204ENST00000540803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.42■■■□□ 2.34e-6■■■□□ 16.3
RAB35-204ENST00000540803 ERVK-7P63135 1459 aa29.42■■■□□ 2.3
RAB35-204ENST00000540803 VWDEQ8N2E2 1590 aa29.41■■■□□ 2.3
RAB35-204ENST00000540803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.41■■■□□ 2.3
RAB35-204ENST00000540803 ILDR1Q86SU0 546 aaPredicted RBP29.4■■■□□ 2.3
RAB35-204ENST00000540803 ANKRD50Q9ULJ7 1429 aa29.39■■■□□ 2.3
RAB35-204ENST00000540803 NLRP1Q9C000 1473 aa29.39■■■□□ 2.3
RAB35-204ENST00000540803 ARHGAP31Q2M1Z3 1444 aa29.38■■■□□ 2.29
RAB35-204ENST00000540803 KANK1Q14678 1352 aa29.38■■■□□ 2.29
RAB35-204ENST00000540803 LMTK2Q8IWU2 1503 aa29.37■■■□□ 2.29
RAB35-204ENST00000540803 ROCK1Q13464 1354 aa29.37■■■□□ 2.29
RAB35-204ENST00000540803 NCKAP5LQ9HCH0 1330 aa29.36■■■□□ 2.29
RAB35-204ENST00000540803 RRBP1Q9P2E9 1410 aaKnown RBP29.34■■■□□ 2.29
RAB35-204ENST00000540803 UGGT1Q9NYU2 1555 aa29.32■■■□□ 2.28
RAB35-204ENST00000540803 PKD2Q13563 968 aa29.32■■■□□ 2.28
RAB35-204ENST00000540803 POLR1AO95602 1720 aaPredicted RBP29.31■■■□□ 2.28
RAB35-204ENST00000540803 ITGAEP38570 1179 aa29.31■■■□□ 2.28
RAB35-204ENST00000540803 UNC13BO14795 1591 aa29.28■■■□□ 2.28
RAB35-204ENST00000540803 EFCAB6Q5THR3 1501 aa29.28■■■□□ 2.28
RAB35-204ENST00000540803 THEMISQ8N1K5 641 aaPredicted RBP29.25■■■□□ 2.27
RAB35-204ENST00000540803 CERKQ8TCT0 537 aa29.25■■■□□ 2.27
RAB35-204ENST00000540803 NEURL4Q96JN8 1562 aa29.25■■■□□ 2.27
RAB35-204ENST00000540803 UBR1Q8IWV7 1749 aa29.25■■■□□ 2.27
RAB35-204ENST00000540803 FBXO41Q8TF61 875 aa29.24■■■□□ 2.27
RAB35-204ENST00000540803 LTBP4Q8N2S1 1624 aa29.22■■■□□ 2.27
RAB35-204ENST00000540803 TET3O43151 1660 aa29.21■■■□□ 2.27
RAB35-204ENST00000540803 GCC2Q8IWJ2 1684 aa29.19■■■□□ 2.26
RAB35-204ENST00000540803 SYNMO15061 1565 aa29.19■■■□□ 2.26
RAB35-204ENST00000540803 PIK3C2BO00750 1634 aa29.18■■■□□ 2.26
RAB35-204ENST00000540803 NOS1P29475 1434 aa29.18■■■□□ 2.26
RAB35-204ENST00000540803 RPRD2Q5VT52 1461 aaKnown RBP29.17■■■□□ 2.26
RAB35-204ENST00000540803 IQGAP3Q86VI3 1631 aa29.16■■■□□ 2.26
RAB35-204ENST00000540803 ANKLE2Q86XL3 938 aa29.16■■■□□ 2.26
RAB35-204ENST00000540803 MED14O60244 1454 aa29.13■■■□□ 2.25
RAB35-204ENST00000540803 ZNF335Q9H4Z2 1342 aaPredicted RBP29.12■■■□□ 2.25
RAB35-204ENST00000540803 KDM5AP29375 1690 aaKnown RBP29.12■■■□□ 2.25
RAB35-204ENST00000540803 E9PCH4 1651 aa29.11■■■□□ 2.25
RAB35-204ENST00000540803 IQGAP1P46940 1657 aa29.1■■■□□ 2.25
RAB35-204ENST00000540803 NPHP4O75161 1426 aaPredicted RBP29.1■■■□□ 2.25
RAB35-204ENST00000540803 ARHGAP23Q9P227 1491 aa29.1■■■□□ 2.25
RAB35-204ENST00000540803 SLIT1O75093 1534 aa29.1■■■□□ 2.25
RAB35-204ENST00000540803 IDI1Q13907 227 aa29.09■■■□□ 2.25
RAB35-204ENST00000540803 NUP155O75694 1391 aa29.07■■■□□ 2.24
RAB35-204ENST00000540803 NAIPQ13075 1403 aa29.06■■■□□ 2.24
RAB35-204ENST00000540803 ADGRB3O60242 1522 aa29.04■■■□□ 2.24
RAB35-204ENST00000540803 SCAF11Q99590 1463 aaKnown RBP29.04■■■□□ 2.24
RAB35-204ENST00000540803 SLC52A1Q9NWF4 448 aa29.03■■■□□ 2.24
RAB35-204ENST00000540803 IQSEC2Q5JU85 1478 aa29.03■■■□□ 2.24
RAB35-204ENST00000540803 STAG3Q9UJ98 1225 aa29.02■■■□□ 2.24
RAB35-204ENST00000540803 TMEM2Q9UHN6 1383 aa29.01■■■□□ 2.24
RAB35-204ENST00000540803 LTKP29376 864 aa29.01■■■□□ 2.23
RAB35-204ENST00000540803 MYO5BQ9ULV0 1848 aa29■■■□□ 2.23
RAB35-204ENST00000540803 HFM1A2PYH4 1435 aa28.99■■■□□ 2.23
RAB35-204ENST00000540803 TXNDC2Q86VQ3 553 aa28.98■■■□□ 2.23
RAB35-204ENST00000540803 TMEM131LA2VDJ0 1609 aa28.94■■■□□ 2.22
RAB35-204ENST00000540803 EID1Q9Y6B2 187 aa28.94■■■□□ 2.22
RAB35-204ENST00000540803 CPS1P31327 1500 aa28.94■■■□□ 2.22
RAB35-204ENST00000540803 STRCP1A6NGW2 1772 aa28.93■■■□□ 2.22
RAB35-204ENST00000540803 SPHKAPQ2M3C7 1700 aa28.91■■■□□ 2.22
RAB35-204ENST00000540803 ZFYVE9O95405 1425 aa28.86■■■□□ 2.21
RAB35-204ENST00000540803 RIMS2Q9UQ26 1411 aa28.81■■■□□ 2.2
RAB35-204ENST00000540803 CHGAP10645 457 aaKnown RBP28.8■■■□□ 2.2
RAB35-204ENST00000540803 TRIM52Q96A61 297 aa28.8■■■□□ 2.2
RAB35-204ENST00000540803 TRPM2O94759 1503 aa28.77■■■□□ 2.2
RAB35-204ENST00000540803 LRRC7Q96NW7 1537 aa28.77■■■□□ 2.2
RAB35-204ENST00000540803 UBAP1LF5GYI3 381 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms