RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 CROCC2H7BZ55 1655 aa26.63■■□□□ 1.85
CACNA2D4-211ENST00000540728 CEP170BQ9Y4F5 1589 aaPredicted RBP26.62■■□□□ 1.85
CACNA2D4-211ENST00000540728 CAMSAP1Q5T5Y3 1602 aa26.61■■□□□ 1.85
CACNA2D4-211ENST00000540728 NCOA1Q15788 1441 aa26.6■■□□□ 1.85
CACNA2D4-211ENST00000540728 DMRT2Q9Y5R5 561 aa26.6■■□□□ 1.85
CACNA2D4-211ENST00000540728 RNF17Q9BXT8 1623 aaKnown RBP26.58■■□□□ 1.85
CACNA2D4-211ENST00000540728 EIF2AK4Q9P2K8 1649 aaKnown RBP26.58■■□□□ 1.85
CACNA2D4-211ENST00000540728 TCOF1Q13428 1488 aaKnown RBP26.56■■□□□ 1.84
CACNA2D4-211ENST00000540728 WASHC2CQ9Y4E1 1318 aa26.56■■□□□ 1.84
CACNA2D4-211ENST00000540728 SHANK2Q9UPX8 1470 aa26.55■■□□□ 1.84
CACNA2D4-211ENST00000540728 ABCC5O15440 1437 aa26.55■■□□□ 1.84
CACNA2D4-211ENST00000540728 PZPP20742 1482 aa26.55■■□□□ 1.84
CACNA2D4-211ENST00000540728 PTPRTO14522 1441 aa26.54■■□□□ 1.84
CACNA2D4-211ENST00000540728 DNMT1P26358 1616 aaKnown RBP26.54■■□□□ 1.84
CACNA2D4-211ENST00000540728 ZC3H13Q5T200 1668 aaKnown RBP26.54■■□□□ 1.84
CACNA2D4-211ENST00000540728 DUOX2Q9NRD8 1548 aa26.53■■□□□ 1.84
CACNA2D4-211ENST00000540728 DAPK1P53355 1430 aa26.52■■□□□ 1.84
CACNA2D4-211ENST00000540728 CERKQ8TCT0 537 aa26.51■■□□□ 1.83
CACNA2D4-211ENST00000540728 TNRQ92752 1358 aa26.5■■□□□ 1.83
CACNA2D4-211ENST00000540728 ABCC3O15438 1527 aa26.49■■□□□ 1.83
CACNA2D4-211ENST00000540728 A2ML1A8K2U0 1454 aa26.49■■□□□ 1.83
CACNA2D4-211ENST00000540728 KIF15Q9NS87 1388 aa26.49■■□□□ 1.83
CACNA2D4-211ENST00000540728 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
CACNA2D4-211ENST00000540728 PLA2R1Q13018 1463 aa26.49■■□□□ 1.83
CACNA2D4-211ENST00000540728 MROH1Q8NDA8 1641 aa26.48■■□□□ 1.83
CACNA2D4-211ENST00000540728 RRP7BPQ9NSQ0 103 aa26.47■■□□□ 1.83
CACNA2D4-211ENST00000540728 CEP152O94986 1710 aa26.47■■□□□ 1.83
CACNA2D4-211ENST00000540728 FBXO31Q5XUX0 539 aaPredicted RBP26.46■■□□□ 1.83
CACNA2D4-211ENST00000540728 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.82
CACNA2D4-211ENST00000540728 ANKRD30AQ9BXX3 1397 aa26.45■■□□□ 1.82
CACNA2D4-211ENST00000540728 NCKAP5LQ9HCH0 1330 aa26.44■■□□□ 1.82
CACNA2D4-211ENST00000540728 ERBINQ96RT1 1412 aa26.44■■□□□ 1.82
CACNA2D4-211ENST00000540728 PRDM15P57071 1507 aaPredicted RBP26.41■■□□□ 1.82
CACNA2D4-211ENST00000540728 POLR1AO95602 1720 aaPredicted RBP26.39■■□□□ 1.82
CACNA2D4-211ENST00000540728 NLRP1Q9C000 1473 aa26.38■■□□□ 1.81
CACNA2D4-211ENST00000540728 PKD2Q13563 968 aa26.38■■□□□ 1.81
CACNA2D4-211ENST00000540728 SPATA31D1Q6ZQQ2 1576 aa26.37■■□□□ 1.81
CACNA2D4-211ENST00000540728 LTBP4Q8N2S1 1624 aa26.36■■□□□ 1.81
CACNA2D4-211ENST00000540728 ERVK-7P63135 1459 aa26.36■■□□□ 1.81
CACNA2D4-211ENST00000540728 DEPDC5O75140 1603 aa26.36■■□□□ 1.81
CACNA2D4-211ENST00000540728 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
CACNA2D4-211ENST00000540728 UGGT1Q9NYU2 1555 aa26.35■■□□□ 1.81
CACNA2D4-211ENST00000540728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.33■■□□□ 1.817e-9■□□□□ 9.3
CACNA2D4-211ENST00000540728 ADGRL2O95490 1459 aa26.33■■□□□ 1.81
CACNA2D4-211ENST00000540728 KANK1Q14678 1352 aa26.33■■□□□ 1.8
CACNA2D4-211ENST00000540728 NEURL4Q96JN8 1562 aa26.3■■□□□ 1.8
CACNA2D4-211ENST00000540728 ZNF335Q9H4Z2 1342 aaPredicted RBP26.3■■□□□ 1.8
CACNA2D4-211ENST00000540728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.29■■□□□ 1.81e-9■□□□□ 10.1
CACNA2D4-211ENST00000540728 CFAP65Q6ZU64 1925 aaKnown RBP26.28■■□□□ 1.8
CACNA2D4-211ENST00000540728 IQSEC2Q5JU85 1478 aa26.25■■□□□ 1.79
CACNA2D4-211ENST00000540728 THEMISQ8N1K5 641 aaPredicted RBP26.25■■□□□ 1.79
CACNA2D4-211ENST00000540728 ARHGAP31Q2M1Z3 1444 aa26.23■■□□□ 1.79
CACNA2D4-211ENST00000540728 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
CACNA2D4-211ENST00000540728 ANKLE2Q86XL3 938 aa26.21■■□□□ 1.79
CACNA2D4-211ENST00000540728 UBR1Q8IWV7 1749 aa26.21■■□□□ 1.79
CACNA2D4-211ENST00000540728 VWDEQ8N2E2 1590 aa26.2■■□□□ 1.78
CACNA2D4-211ENST00000540728 LMTK2Q8IWU2 1503 aa26.19■■□□□ 1.78
CACNA2D4-211ENST00000540728 IQGAP1P46940 1657 aa26.19■■□□□ 1.78
CACNA2D4-211ENST00000540728 ITGAEP38570 1179 aa26.19■■□□□ 1.78
CACNA2D4-211ENST00000540728 NPHP4O75161 1426 aaPredicted RBP26.19■■□□□ 1.78
CACNA2D4-211ENST00000540728 EFCAB6Q5THR3 1501 aa26.18■■□□□ 1.78
CACNA2D4-211ENST00000540728 ROCK1Q13464 1354 aa26.18■■□□□ 1.78
CACNA2D4-211ENST00000540728 PIK3C2BO00750 1634 aa26.15■■□□□ 1.78
CACNA2D4-211ENST00000540728 MED14O60244 1454 aa26.14■■□□□ 1.78
CACNA2D4-211ENST00000540728 CPS1P31327 1500 aa26.12■■□□□ 1.77
CACNA2D4-211ENST00000540728 SYNMO15061 1565 aa26.1■■□□□ 1.77
CACNA2D4-211ENST00000540728 SCAF11Q99590 1463 aaKnown RBP26.1■■□□□ 1.77
CACNA2D4-211ENST00000540728 UNC13BO14795 1591 aa26.09■■□□□ 1.77
CACNA2D4-211ENST00000540728 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.77
CACNA2D4-211ENST00000540728 TET3O43151 1660 aa26.07■■□□□ 1.76
CACNA2D4-211ENST00000540728 STAG3Q9UJ98 1225 aa26.07■■□□□ 1.76
CACNA2D4-211ENST00000540728 SLIT1O75093 1534 aa26.07■■□□□ 1.76
CACNA2D4-211ENST00000540728 UBAP1LF5GYI3 381 aa26.06■■□□□ 1.76
CACNA2D4-211ENST00000540728 ARHGAP23Q9P227 1491 aa26.05■■□□□ 1.76
CACNA2D4-211ENST00000540728 KDM5AP29375 1690 aaKnown RBP26.04■■□□□ 1.76
CACNA2D4-211ENST00000540728 GCC2Q8IWJ2 1684 aa26.04■■□□□ 1.76
CACNA2D4-211ENST00000540728 ADGRB3O60242 1522 aa26.04■■□□□ 1.76
CACNA2D4-211ENST00000540728 RPRD2Q5VT52 1461 aaKnown RBP26.03■■□□□ 1.76
CACNA2D4-211ENST00000540728 NOS1P29475 1434 aa26.02■■□□□ 1.76
CACNA2D4-211ENST00000540728 IDI1Q13907 227 aa26■■□□□ 1.75
CACNA2D4-211ENST00000540728 EID1Q9Y6B2 187 aa26■■□□□ 1.75
CACNA2D4-211ENST00000540728 TMEM2Q9UHN6 1383 aa25.99■■□□□ 1.75
CACNA2D4-211ENST00000540728 TXNDC2Q86VQ3 553 aa25.99■■□□□ 1.75
CACNA2D4-211ENST00000540728 SLC52A1Q9NWF4 448 aa25.99■■□□□ 1.75
CACNA2D4-211ENST00000540728 IQGAP3Q86VI3 1631 aa25.98■■□□□ 1.75
CACNA2D4-211ENST00000540728 STRCP1A6NGW2 1772 aa25.97■■□□□ 1.75
CACNA2D4-211ENST00000540728 NUP155O75694 1391 aa25.97■■□□□ 1.75
CACNA2D4-211ENST00000540728 LTKP29376 864 aa25.97■■□□□ 1.75
CACNA2D4-211ENST00000540728 SCAF1Q9H7N4 1312 aaKnown RBP25.96■■□□□ 1.75
CACNA2D4-211ENST00000540728 E9PCH4 1651 aa25.95■■□□□ 1.74
CACNA2D4-211ENST00000540728 LRRC7Q96NW7 1537 aa25.9■■□□□ 1.74
CACNA2D4-211ENST00000540728 MYO5BQ9ULV0 1848 aa25.9■■□□□ 1.74
CACNA2D4-211ENST00000540728 PIP4K2BP78356 416 aa25.89■■□□□ 1.74
CACNA2D4-211ENST00000540728 TOM1O60784 492 aa25.88■■□□□ 1.73
CACNA2D4-211ENST00000540728 NAIPQ13075 1403 aa25.87■■□□□ 1.73
CACNA2D4-211ENST00000540728 TMEM131LA2VDJ0 1609 aa25.85■■□□□ 1.73
CACNA2D4-211ENST00000540728 DISP3Q9P2K9 1392 aa25.85■■□□□ 1.73
CACNA2D4-211ENST00000540728 CHGAP10645 457 aaKnown RBP25.83■■□□□ 1.73
CACNA2D4-211ENST00000540728 HDGFP51858 240 aaKnown RBP25.83■■□□□ 1.73
CACNA2D4-211ENST00000540728 BCANQ96GW7 911 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms