RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-209ENST00000540162 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
MRPL48-209ENST00000540162 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
MRPL48-209ENST00000540162 HSPA1LP34931 641 aa18.56■□□□□ 0.56
MRPL48-209ENST00000540162 RSPH4AQ5TD94 716 aa18.56■□□□□ 0.56
MRPL48-209ENST00000540162 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
MRPL48-209ENST00000540162 ADGBQ8N7X0 1667 aa18.56■□□□□ 0.56
MRPL48-209ENST00000540162 DNMT1P26358 1616 aaKnown RBP18.55■□□□□ 0.56
MRPL48-209ENST00000540162 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
MRPL48-209ENST00000540162 TOM1O60784 492 aa18.54■□□□□ 0.56
MRPL48-209ENST00000540162 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
MRPL48-209ENST00000540162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.54■□□□□ 0.56
MRPL48-209ENST00000540162 TSPY4P0CV99 314 aa18.53■□□□□ 0.56
MRPL48-209ENST00000540162 TSPY10P0CW01 314 aa18.53■□□□□ 0.56
MRPL48-209ENST00000540162 PZPP20742 1482 aa18.52■□□□□ 0.55
MRPL48-209ENST00000540162 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.55
MRPL48-209ENST00000540162 SHANK2Q9UPX8 1470 aa18.52■□□□□ 0.55
MRPL48-209ENST00000540162 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
MRPL48-209ENST00000540162 NCOA2Q15596 1464 aa18.51■□□□□ 0.55
MRPL48-209ENST00000540162 CAMSAP2Q08AD1 1489 aa18.49■□□□□ 0.55
MRPL48-209ENST00000540162 KDM5DQ9BY66 1539 aa18.49■□□□□ 0.55
MRPL48-209ENST00000540162 NEURL4Q96JN8 1562 aa18.47■□□□□ 0.55
MRPL48-209ENST00000540162 CPS1P31327 1500 aa18.47■□□□□ 0.55
MRPL48-209ENST00000540162 NPHP4O75161 1426 aaPredicted RBP18.45■□□□□ 0.54
MRPL48-209ENST00000540162 NLRP1Q9C000 1473 aa18.44■□□□□ 0.54
MRPL48-209ENST00000540162 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
MRPL48-209ENST00000540162 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
MRPL48-209ENST00000540162 MED14O60244 1454 aa18.41■□□□□ 0.54
MRPL48-209ENST00000540162 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
MRPL48-209ENST00000540162 VWDEQ8N2E2 1590 aa18.41■□□□□ 0.54
MRPL48-209ENST00000540162 KANK4Q5T7N3 995 aaPredicted RBP18.38■□□□□ 0.53
MRPL48-209ENST00000540162 ARHGEF5Q12774 1597 aa18.38■□□□□ 0.53
MRPL48-209ENST00000540162 POLR1AO95602 1720 aaPredicted RBP18.37■□□□□ 0.53
MRPL48-209ENST00000540162 MED1Q15648 1581 aaPredicted RBP18.37■□□□□ 0.53
MRPL48-209ENST00000540162 PHF23Q9BUL5 403 aaPredicted RBP18.36■□□□□ 0.53
MRPL48-209ENST00000540162 ABCC3O15438 1527 aa18.35■□□□□ 0.53
MRPL48-209ENST00000540162 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
MRPL48-209ENST00000540162 LOC105371045A0A1W2PR82 267 aa18.35■□□□□ 0.53
MRPL48-209ENST00000540162 DEPDC5O75140 1603 aa18.34■□□□□ 0.53
MRPL48-209ENST00000540162 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.53
MRPL48-209ENST00000540162 ERVK-7P63135 1459 aa18.33■□□□□ 0.53
MRPL48-209ENST00000540162 LTKP29376 864 aa18.33■□□□□ 0.52
MRPL48-209ENST00000540162 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.52
MRPL48-209ENST00000540162 ALKQ9UM73 1620 aa18.33■□□□□ 0.52
MRPL48-209ENST00000540162 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
MRPL48-209ENST00000540162 RRP7BPQ9NSQ0 103 aa18.3■□□□□ 0.52
MRPL48-209ENST00000540162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
MRPL48-209ENST00000540162 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
MRPL48-209ENST00000540162 MAST1Q9Y2H9 1570 aa18.29■□□□□ 0.52
MRPL48-209ENST00000540162 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
MRPL48-209ENST00000540162 MYOM3Q5VTT5 1437 aa18.27■□□□□ 0.52
MRPL48-209ENST00000540162 EID1Q9Y6B2 187 aa18.27■□□□□ 0.52
MRPL48-209ENST00000540162 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
MRPL48-209ENST00000540162 MROH1Q8NDA8 1641 aa18.25■□□□□ 0.51
MRPL48-209ENST00000540162 KIF15Q9NS87 1388 aa18.25■□□□□ 0.51
MRPL48-209ENST00000540162 DUOX2Q9NRD8 1548 aa18.24■□□□□ 0.51
MRPL48-209ENST00000540162 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
MRPL48-209ENST00000540162 EIF2AK4Q9P2K8 1649 aaKnown RBP18.23■□□□□ 0.51
MRPL48-209ENST00000540162 ZC3H13Q5T200 1668 aaKnown RBP18.23■□□□□ 0.51
MRPL48-209ENST00000540162 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
MRPL48-209ENST00000540162 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
MRPL48-209ENST00000540162 ARHGAP23Q9P227 1491 aa18.22■□□□□ 0.51
MRPL48-209ENST00000540162 ABCC5O15440 1437 aa18.22■□□□□ 0.51
MRPL48-209ENST00000540162 RGS17Q9UGC6 210 aaPredicted RBP18.21■□□□□ 0.51
MRPL48-209ENST00000540162 SLIT1O75093 1534 aa18.2■□□□□ 0.5
MRPL48-209ENST00000540162 MAP3K1Q13233 1512 aa18.2■□□□□ 0.5
MRPL48-209ENST00000540162 IDI1Q13907 227 aa18.2■□□□□ 0.5
MRPL48-209ENST00000540162 TMEM2Q9UHN6 1383 aa18.19■□□□□ 0.5
MRPL48-209ENST00000540162 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
MRPL48-209ENST00000540162 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
MRPL48-209ENST00000540162 SYNMO15061 1565 aa18.18■□□□□ 0.5
MRPL48-209ENST00000540162 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
MRPL48-209ENST00000540162 KANK1Q14678 1352 aa18.17■□□□□ 0.5
MRPL48-209ENST00000540162 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
MRPL48-209ENST00000540162 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
MRPL48-209ENST00000540162 CEP152O94986 1710 aa18.17■□□□□ 0.5
MRPL48-209ENST00000540162 KCNA6P17658 529 aa18.16■□□□□ 0.5
MRPL48-209ENST00000540162 APLP2Q06481 763 aa18.16■□□□□ 0.5
MRPL48-209ENST00000540162 PROSER2Q86WR7 435 aaPredicted RBP18.16■□□□□ 0.5
MRPL48-209ENST00000540162 TMEM94Q12767 1356 aa18.16■□□□□ 0.5
MRPL48-209ENST00000540162 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
MRPL48-209ENST00000540162 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.49
MRPL48-209ENST00000540162 DAPK1P53355 1430 aa18.14■□□□□ 0.49
MRPL48-209ENST00000540162 BCANQ96GW7 911 aa18.12■□□□□ 0.49
MRPL48-209ENST00000540162 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
MRPL48-209ENST00000540162 ANKRD30AQ9BXX3 1397 aa18.11■□□□□ 0.49
MRPL48-209ENST00000540162 PIK3C2BO00750 1634 aa18.11■□□□□ 0.49
MRPL48-209ENST00000540162 POTEAQ6S8J7 498 aa18.1■□□□□ 0.49
MRPL48-209ENST00000540162 EFCAB6Q5THR3 1501 aa18.09■□□□□ 0.49
MRPL48-209ENST00000540162 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
MRPL48-209ENST00000540162 SLC52A1Q9NWF4 448 aa18.08■□□□□ 0.48
MRPL48-209ENST00000540162 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
MRPL48-209ENST00000540162 LMTK2Q8IWU2 1503 aa18.07■□□□□ 0.48
MRPL48-209ENST00000540162 NOS1P29475 1434 aa18.06■□□□□ 0.48
MRPL48-209ENST00000540162 TET3O43151 1660 aa18.06■□□□□ 0.48
MRPL48-209ENST00000540162 SLAIN2Q9P270 581 aa18.05■□□□□ 0.48
MRPL48-209ENST00000540162 XIRP1Q702N8 1843 aaKnown RBP18.04■□□□□ 0.48
MRPL48-209ENST00000540162 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
MRPL48-209ENST00000540162 CROCC2H7BZ55 1655 aa18.02■□□□□ 0.47
MRPL48-209ENST00000540162 MSH6P52701 1360 aa18.02■□□□□ 0.47
MRPL48-209ENST00000540162 PPP1R15AO75807 674 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms