RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 RTEL1-TNFRSF6BF6WH68 1400 aa11.93□□□□□ -0.5
LRTOMT-217ENST00000539587 DHX29Q7Z478 1369 aaKnown RBP11.92□□□□□ -0.5
LRTOMT-217ENST00000539587 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
LRTOMT-217ENST00000539587 MED14O60244 1454 aa11.92□□□□□ -0.5
LRTOMT-217ENST00000539587 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
LRTOMT-217ENST00000539587 CHIC1Q5VXU3 224 aa11.91□□□□□ -0.5
LRTOMT-217ENST00000539587 STRCP1A6NGW2 1772 aa11.91□□□□□ -0.5
LRTOMT-217ENST00000539587 TNRQ92752 1358 aa11.9□□□□□ -0.5
LRTOMT-217ENST00000539587 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
LRTOMT-217ENST00000539587 PZPP20742 1482 aa11.89□□□□□ -0.51
LRTOMT-217ENST00000539587 CCNB3Q8WWL7 1395 aa11.89□□□□□ -0.51
LRTOMT-217ENST00000539587 MIA2Q96PC5 1412 aa11.88□□□□□ -0.51
LRTOMT-217ENST00000539587 ANKLE2Q86XL3 938 aa11.88□□□□□ -0.51
LRTOMT-217ENST00000539587 RGS17Q9UGC6 210 aaPredicted RBP11.88□□□□□ -0.51
LRTOMT-217ENST00000539587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.88□□□□□ -0.51
LRTOMT-217ENST00000539587 FAM135AQ9P2D6 1515 aa11.87□□□□□ -0.51
LRTOMT-217ENST00000539587 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
LRTOMT-217ENST00000539587 TIAM1Q13009 1591 aa11.87□□□□□ -0.51
LRTOMT-217ENST00000539587 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
LRTOMT-217ENST00000539587 NPHP4O75161 1426 aaPredicted RBP11.86□□□□□ -0.51
LRTOMT-217ENST00000539587 NLRP1Q9C000 1473 aa11.85□□□□□ -0.51
LRTOMT-217ENST00000539587 KIF3BO15066 747 aa11.85□□□□□ -0.51
LRTOMT-217ENST00000539587 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
LRTOMT-217ENST00000539587 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
LRTOMT-217ENST00000539587 UGGT1Q9NYU2 1555 aa11.84□□□□□ -0.51
LRTOMT-217ENST00000539587 IQGAP1P46940 1657 aa11.83□□□□□ -0.52
LRTOMT-217ENST00000539587 XIRP1Q702N8 1843 aaKnown RBP11.83□□□□□ -0.52
LRTOMT-217ENST00000539587 WASHC2CQ9Y4E1 1318 aa11.83□□□□□ -0.52
LRTOMT-217ENST00000539587 ZC3H13Q5T200 1668 aaKnown RBP11.82□□□□□ -0.52
LRTOMT-217ENST00000539587 CEP162Q5TB80 1403 aa11.82□□□□□ -0.52
LRTOMT-217ENST00000539587 MTUS2Q5JR59 1369 aa11.81□□□□□ -0.52
LRTOMT-217ENST00000539587 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
LRTOMT-217ENST00000539587 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
LRTOMT-217ENST00000539587 PHF23Q9BUL5 403 aaPredicted RBP11.79□□□□□ -0.52
LRTOMT-217ENST00000539587 CFAP65Q6ZU64 1925 aaKnown RBP11.79□□□□□ -0.52
LRTOMT-217ENST00000539587 RNF17Q9BXT8 1623 aaKnown RBP11.78□□□□□ -0.52
LRTOMT-217ENST00000539587 SYNMO15061 1565 aa11.78□□□□□ -0.52
LRTOMT-217ENST00000539587 EHBP1L1Q8N3D4 1523 aa11.77□□□□□ -0.52
LRTOMT-217ENST00000539587 ARHGEF5Q12774 1597 aa11.77□□□□□ -0.53
LRTOMT-217ENST00000539587 UBR1Q8IWV7 1749 aa11.77□□□□□ -0.53
LRTOMT-217ENST00000539587 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
LRTOMT-217ENST00000539587 ARHGAP23Q9P227 1491 aa11.76□□□□□ -0.53
LRTOMT-217ENST00000539587 ABCC3O15438 1527 aa11.76□□□□□ -0.53
LRTOMT-217ENST00000539587 LTKP29376 864 aa11.76□□□□□ -0.53
LRTOMT-217ENST00000539587 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
LRTOMT-217ENST00000539587 MROH1Q8NDA8 1641 aa11.75□□□□□ -0.53
LRTOMT-217ENST00000539587 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
LRTOMT-217ENST00000539587 FAM135BQ49AJ0 1406 aa11.75□□□□□ -0.53
LRTOMT-217ENST00000539587 ERVK-7P63135 1459 aa11.75□□□□□ -0.53
LRTOMT-217ENST00000539587 SLIT1O75093 1534 aa11.74□□□□□ -0.53
LRTOMT-217ENST00000539587 MAST1Q9Y2H9 1570 aa11.73□□□□□ -0.53
LRTOMT-217ENST00000539587 SCAF11Q99590 1463 aaKnown RBP11.71□□□□□ -0.53
LRTOMT-217ENST00000539587 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.54
LRTOMT-217ENST00000539587 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.54
LRTOMT-217ENST00000539587 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
LRTOMT-217ENST00000539587 TSPY4P0CV99 314 aa11.7□□□□□ -0.54
LRTOMT-217ENST00000539587 TSPY10P0CW01 314 aa11.7□□□□□ -0.54
LRTOMT-217ENST00000539587 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
LRTOMT-217ENST00000539587 CEP152O94986 1710 aa11.69□□□□□ -0.54
LRTOMT-217ENST00000539587 TXNDC2Q86VQ3 553 aa11.69□□□□□ -0.54
LRTOMT-217ENST00000539587 TET3O43151 1660 aa11.68□□□□□ -0.54
LRTOMT-217ENST00000539587 KCNA6P17658 529 aa11.66□□□□□ -0.54
LRTOMT-217ENST00000539587 TMEM2Q9UHN6 1383 aa11.66□□□□□ -0.54
LRTOMT-217ENST00000539587 MAP3K1Q13233 1512 aa11.65□□□□□ -0.54
LRTOMT-217ENST00000539587 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.54
LRTOMT-217ENST00000539587 ROBO1Q9Y6N7 1651 aa11.65□□□□□ -0.54
LRTOMT-217ENST00000539587 PIK3C2BO00750 1634 aa11.65□□□□□ -0.54
LRTOMT-217ENST00000539587 TMEM94Q12767 1356 aa11.65□□□□□ -0.55
LRTOMT-217ENST00000539587 DUOX2Q9NRD8 1548 aa11.63□□□□□ -0.55
LRTOMT-217ENST00000539587 PRDM15P57071 1507 aaPredicted RBP11.62□□□□□ -0.55
LRTOMT-217ENST00000539587 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
LRTOMT-217ENST00000539587 LRRC9Q6ZRR7 1453 aa11.62□□□□□ -0.55
LRTOMT-217ENST00000539587 SETD1AO15047 1707 aaKnown RBP11.61□□□□□ -0.55
LRTOMT-217ENST00000539587 IDI1Q13907 227 aa11.61□□□□□ -0.55
LRTOMT-217ENST00000539587 NWD1Q149M9 1564 aa11.6□□□□□ -0.55
LRTOMT-217ENST00000539587 CHD2O14647 1828 aaKnown RBP11.59□□□□□ -0.55
LRTOMT-217ENST00000539587 KANK4Q5T7N3 995 aaPredicted RBP11.59□□□□□ -0.55
LRTOMT-217ENST00000539587 PROSER2Q86WR7 435 aaPredicted RBP11.59□□□□□ -0.55
LRTOMT-217ENST00000539587 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
LRTOMT-217ENST00000539587 SLC26A8Q96RN1 970 aa11.59□□□□□ -0.55
LRTOMT-217ENST00000539587 SLAIN2Q9P270 581 aa11.59□□□□□ -0.55
LRTOMT-217ENST00000539587 LMTK2Q8IWU2 1503 aa11.59□□□□□ -0.55
LRTOMT-217ENST00000539587 MYOM3Q5VTT5 1437 aa11.59□□□□□ -0.55
LRTOMT-217ENST00000539587 EFCAB6Q5THR3 1501 aa11.58□□□□□ -0.56
LRTOMT-217ENST00000539587 NOS1P29475 1434 aa11.58□□□□□ -0.56
LRTOMT-217ENST00000539587 ERBINQ96RT1 1412 aa11.58□□□□□ -0.56
LRTOMT-217ENST00000539587 PHLPP1O60346 1717 aa11.57□□□□□ -0.56
LRTOMT-217ENST00000539587 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
LRTOMT-217ENST00000539587 ABCC5O15440 1437 aa11.57□□□□□ -0.56
LRTOMT-217ENST00000539587 NKTRP30414 1462 aaKnown RBP11.57□□□□□ -0.56
LRTOMT-217ENST00000539587 COL16A1Q07092 1604 aaPredicted RBP11.57□□□□□ -0.56
LRTOMT-217ENST00000539587 KIF15Q9NS87 1388 aa11.56□□□□□ -0.56
LRTOMT-217ENST00000539587 JCADQ9P266 1359 aa11.56□□□□□ -0.56
LRTOMT-217ENST00000539587 CROCC2H7BZ55 1655 aa11.55□□□□□ -0.56
LRTOMT-217ENST00000539587 LRP6O75581 1613 aa11.54□□□□□ -0.56
LRTOMT-217ENST00000539587 RRP7BPQ9NSQ0 103 aa11.54□□□□□ -0.56
LRTOMT-217ENST00000539587 MYO5BQ9ULV0 1848 aa11.53□□□□□ -0.56
LRTOMT-217ENST00000539587 ZFYVE9O95405 1425 aa11.53□□□□□ -0.56
LRTOMT-217ENST00000539587 NCOA3Q9Y6Q9 1424 aa11.53□□□□□ -0.56
LRTOMT-217ENST00000539587 SLC52A1Q9NWF4 448 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms