RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 IQSEC2Q5JU85 1478 aa17.35■□□□□ 0.37
DDB1-214ENST00000539426 RSPH4AQ5TD94 716 aa17.34■□□□□ 0.37
DDB1-214ENST00000539426 ZNF335Q9H4Z2 1342 aaPredicted RBP17.34■□□□□ 0.37
DDB1-214ENST00000539426 FAM135AQ9P2D6 1515 aa17.34■□□□□ 0.37
DDB1-214ENST00000539426 PZPP20742 1482 aa17.33■□□□□ 0.37
DDB1-214ENST00000539426 PKD2Q13563 968 aa17.33■□□□□ 0.36
DDB1-214ENST00000539426 FBXO31Q5XUX0 539 aaPredicted RBP17.33■□□□□ 0.36
DDB1-214ENST00000539426 TNRQ92752 1358 aa17.31■□□□□ 0.36
DDB1-214ENST00000539426 KANK4Q5T7N3 995 aaPredicted RBP17.31■□□□□ 0.36
DDB1-214ENST00000539426 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
DDB1-214ENST00000539426 MAP3K1Q13233 1512 aa17.3■□□□□ 0.36
DDB1-214ENST00000539426 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
DDB1-214ENST00000539426 RNF17Q9BXT8 1623 aaKnown RBP17.29■□□□□ 0.36
DDB1-214ENST00000539426 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
DDB1-214ENST00000539426 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
DDB1-214ENST00000539426 TSPY4P0CV99 314 aa17.28■□□□□ 0.36
DDB1-214ENST00000539426 TSPY10P0CW01 314 aa17.28■□□□□ 0.36
DDB1-214ENST00000539426 MYOM3Q5VTT5 1437 aa17.27■□□□□ 0.35
DDB1-214ENST00000539426 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
DDB1-214ENST00000539426 ABCC3O15438 1527 aa17.25■□□□□ 0.35
DDB1-214ENST00000539426 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
DDB1-214ENST00000539426 EIF2AK4Q9P2K8 1649 aaKnown RBP17.25■□□□□ 0.35
DDB1-214ENST00000539426 ZC3H13Q5T200 1668 aaKnown RBP17.24■□□□□ 0.35
DDB1-214ENST00000539426 DISP3Q9P2K9 1392 aa17.24■□□□□ 0.35
DDB1-214ENST00000539426 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
DDB1-214ENST00000539426 CEP152O94986 1710 aa17.22■□□□□ 0.35
DDB1-214ENST00000539426 CFAP65Q6ZU64 1925 aaKnown RBP17.22■□□□□ 0.35
DDB1-214ENST00000539426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.22■□□□□ 0.355e-11■■□□□ 11.4
DDB1-214ENST00000539426 SPATA31D1Q6ZQQ2 1576 aa17.22■□□□□ 0.35
DDB1-214ENST00000539426 UGGT1Q9NYU2 1555 aa17.22■□□□□ 0.35
DDB1-214ENST00000539426 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
DDB1-214ENST00000539426 CROCC2H7BZ55 1655 aa17.2■□□□□ 0.34
DDB1-214ENST00000539426 ILDR2Q71H61 639 aa17.2■□□□□ 0.34
DDB1-214ENST00000539426 DUOX2Q9NRD8 1548 aa17.19■□□□□ 0.34
DDB1-214ENST00000539426 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
DDB1-214ENST00000539426 DEPDC5O75140 1603 aa17.18■□□□□ 0.34
DDB1-214ENST00000539426 PTPN23Q9H3S7 1636 aa17.18■□□□□ 0.34
DDB1-214ENST00000539426 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
DDB1-214ENST00000539426 THEMISQ8N1K5 641 aaPredicted RBP17.17■□□□□ 0.34
DDB1-214ENST00000539426 MED14O60244 1454 aa17.17■□□□□ 0.34
DDB1-214ENST00000539426 SHANK2Q9UPX8 1470 aa17.17■□□□□ 0.34
DDB1-214ENST00000539426 ABCC5O15440 1437 aa17.16■□□□□ 0.34
DDB1-214ENST00000539426 ANKLE2Q86XL3 938 aa17.16■□□□□ 0.34
DDB1-214ENST00000539426 CPS1P31327 1500 aa17.16■□□□□ 0.34
DDB1-214ENST00000539426 NPHP4O75161 1426 aaPredicted RBP17.15■□□□□ 0.34
DDB1-214ENST00000539426 IQGAP1P46940 1657 aa17.15■□□□□ 0.34
DDB1-214ENST00000539426 PRDM15P57071 1507 aaPredicted RBP17.15■□□□□ 0.34
DDB1-214ENST00000539426 KIF15Q9NS87 1388 aa17.15■□□□□ 0.34
DDB1-214ENST00000539426 UBR1Q8IWV7 1749 aa17.13■□□□□ 0.33
DDB1-214ENST00000539426 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
DDB1-214ENST00000539426 DAPK1P53355 1430 aa17.12■□□□□ 0.33
DDB1-214ENST00000539426 FGD6Q6ZV73 1430 aa17.12■□□□□ 0.33
DDB1-214ENST00000539426 ERBINQ96RT1 1412 aa17.12■□□□□ 0.33
DDB1-214ENST00000539426 RRP7BPQ9NSQ0 103 aa17.1■□□□□ 0.33
DDB1-214ENST00000539426 APLP2Q06481 763 aa17.09■□□□□ 0.33
DDB1-214ENST00000539426 ALKQ9UM73 1620 aa17.08■□□□□ 0.32
DDB1-214ENST00000539426 ARHGAP31Q2M1Z3 1444 aa17.08■□□□□ 0.32
DDB1-214ENST00000539426 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
DDB1-214ENST00000539426 PIP4K2BP78356 416 aa17.06■□□□□ 0.32
DDB1-214ENST00000539426 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
DDB1-214ENST00000539426 SOCS7O14512 581 aa17.05■□□□□ 0.32
DDB1-214ENST00000539426 HSPA1LP34931 641 aa17.05■□□□□ 0.32
DDB1-214ENST00000539426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.324e-8■□□□□ 8.6
DDB1-214ENST00000539426 SLIT1O75093 1534 aa17.05■□□□□ 0.32
DDB1-214ENST00000539426 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
DDB1-214ENST00000539426 PIK3C2BO00750 1634 aa17.04■□□□□ 0.32
DDB1-214ENST00000539426 TOM1O60784 492 aa17.04■□□□□ 0.32
DDB1-214ENST00000539426 CHIC2Q9UKJ5 165 aa17.04■□□□□ 0.32
DDB1-214ENST00000539426 SYNMO15061 1565 aa17.03■□□□□ 0.32
DDB1-214ENST00000539426 LRRC7Q96NW7 1537 aa17.03■□□□□ 0.32
DDB1-214ENST00000539426 LTKP29376 864 aa17.03■□□□□ 0.32
DDB1-214ENST00000539426 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.31
DDB1-214ENST00000539426 LMTK2Q8IWU2 1503 aa17.01■□□□□ 0.31
DDB1-214ENST00000539426 KANK1Q14678 1352 aa17.01■□□□□ 0.31
DDB1-214ENST00000539426 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
DDB1-214ENST00000539426 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
DDB1-214ENST00000539426 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
DDB1-214ENST00000539426 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
DDB1-214ENST00000539426 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
DDB1-214ENST00000539426 TXNDC2Q86VQ3 553 aa16.98■□□□□ 0.31
DDB1-214ENST00000539426 TMEM2Q9UHN6 1383 aa16.97■□□□□ 0.31
DDB1-214ENST00000539426 NOS1P29475 1434 aa16.96■□□□□ 0.3
DDB1-214ENST00000539426 IDI1Q13907 227 aa16.95■□□□□ 0.3
DDB1-214ENST00000539426 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
DDB1-214ENST00000539426 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
DDB1-214ENST00000539426 EID1Q9Y6B2 187 aa16.93■□□□□ 0.3
DDB1-214ENST00000539426 ADGRB3O60242 1522 aa16.92■□□□□ 0.3
DDB1-214ENST00000539426 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
DDB1-214ENST00000539426 MYO5BQ9ULV0 1848 aa16.91■□□□□ 0.3
DDB1-214ENST00000539426 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
DDB1-214ENST00000539426 TET3O43151 1660 aa16.9■□□□□ 0.3
DDB1-214ENST00000539426 RPRD2Q5VT52 1461 aaKnown RBP16.87■□□□□ 0.29
DDB1-214ENST00000539426 UNC13BO14795 1591 aa16.87■□□□□ 0.29
DDB1-214ENST00000539426 GCC2Q8IWJ2 1684 aa16.87■□□□□ 0.29
DDB1-214ENST00000539426 SLC26A8Q96RN1 970 aa16.86■□□□□ 0.29
DDB1-214ENST00000539426 SLC52A1Q9NWF4 448 aa16.85■□□□□ 0.29
DDB1-214ENST00000539426 TMEM94Q12767 1356 aa16.85■□□□□ 0.29
DDB1-214ENST00000539426 NWD1Q149M9 1564 aa16.85■□□□□ 0.29
DDB1-214ENST00000539426 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
DDB1-214ENST00000539426 TMEM131LA2VDJ0 1609 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms