RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 RRP7BPQ9NSQ0 103 aa12.99□□□□□ -0.33
DDB1-208ENST00000537120 PTPRTO14522 1441 aa12.98□□□□□ -0.33
DDB1-208ENST00000537120 PKD2Q13563 968 aa12.98□□□□□ -0.33
DDB1-208ENST00000537120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.331e-8■□□□□ 9.1
DDB1-208ENST00000537120 CHIC2Q9UKJ5 165 aa12.98□□□□□ -0.33
DDB1-208ENST00000537120 STRCQ7RTU9 1775 aa12.98□□□□□ -0.33
DDB1-208ENST00000537120 FAM50AQ14320 339 aaKnown RBP12.97□□□□□ -0.33
DDB1-208ENST00000537120 CAMSAP1Q5T5Y3 1602 aa12.97□□□□□ -0.33
DDB1-208ENST00000537120 TNRQ92752 1358 aa12.96□□□□□ -0.33
DDB1-208ENST00000537120 NCOA1Q15788 1441 aa12.96□□□□□ -0.34
DDB1-208ENST00000537120 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
DDB1-208ENST00000537120 ANKLE2Q86XL3 938 aa12.94□□□□□ -0.34
DDB1-208ENST00000537120 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
DDB1-208ENST00000537120 KIF15Q9NS87 1388 aa12.92□□□□□ -0.34
DDB1-208ENST00000537120 A2ML1A8K2U0 1454 aa12.91□□□□□ -0.34
DDB1-208ENST00000537120 MAST1Q9Y2H9 1570 aa12.91□□□□□ -0.34
DDB1-208ENST00000537120 CEP170BQ9Y4F5 1589 aaPredicted RBP12.91□□□□□ -0.34
DDB1-208ENST00000537120 ABCC5O15440 1437 aa12.91□□□□□ -0.34
DDB1-208ENST00000537120 ANKRD30AQ9BXX3 1397 aa12.91□□□□□ -0.34
DDB1-208ENST00000537120 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
DDB1-208ENST00000537120 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
DDB1-208ENST00000537120 PZPP20742 1482 aa12.91□□□□□ -0.34
DDB1-208ENST00000537120 FGD6Q6ZV73 1430 aa12.9□□□□□ -0.34
DDB1-208ENST00000537120 ADRA2BP18089 450 aa12.9□□□□□ -0.34
DDB1-208ENST00000537120 KANK1Q14678 1352 aa12.9□□□□□ -0.34
DDB1-208ENST00000537120 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
DDB1-208ENST00000537120 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
DDB1-208ENST00000537120 FAM135AQ9P2D6 1515 aa12.89□□□□□ -0.35
DDB1-208ENST00000537120 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
DDB1-208ENST00000537120 CFAP65Q6ZU64 1925 aaKnown RBP12.89□□□□□ -0.35
DDB1-208ENST00000537120 DAPK1P53355 1430 aa12.88□□□□□ -0.35
DDB1-208ENST00000537120 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
DDB1-208ENST00000537120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.88□□□□□ -0.355e-11■■□□□ 11.4
DDB1-208ENST00000537120 PLA2R1Q13018 1463 aa12.88□□□□□ -0.35
DDB1-208ENST00000537120 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
DDB1-208ENST00000537120 DNMT1P26358 1616 aaKnown RBP12.86□□□□□ -0.35
DDB1-208ENST00000537120 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
DDB1-208ENST00000537120 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
DDB1-208ENST00000537120 ABCC3O15438 1527 aa12.85□□□□□ -0.35
DDB1-208ENST00000537120 ITGAEP38570 1179 aa12.85□□□□□ -0.35
DDB1-208ENST00000537120 POTEDQ86YR6 584 aa12.85□□□□□ -0.35
DDB1-208ENST00000537120 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
DDB1-208ENST00000537120 SHANK2Q9UPX8 1470 aa12.85□□□□□ -0.35
DDB1-208ENST00000537120 EIF2AK4Q9P2K8 1649 aaKnown RBP12.84□□□□□ -0.35
DDB1-208ENST00000537120 DISP3Q9P2K9 1392 aa12.84□□□□□ -0.35
DDB1-208ENST00000537120 ERBINQ96RT1 1412 aa12.84□□□□□ -0.35
DDB1-208ENST00000537120 UGGT1Q9NYU2 1555 aa12.84□□□□□ -0.35
DDB1-208ENST00000537120 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
DDB1-208ENST00000537120 RNF17Q9BXT8 1623 aaKnown RBP12.84□□□□□ -0.35
DDB1-208ENST00000537120 TXNDC2Q86VQ3 553 aa12.83□□□□□ -0.36
DDB1-208ENST00000537120 EID1Q9Y6B2 187 aa12.83□□□□□ -0.36
DDB1-208ENST00000537120 LTBP4Q8N2S1 1624 aa12.83□□□□□ -0.36
DDB1-208ENST00000537120 ZC3H13Q5T200 1668 aaKnown RBP12.82□□□□□ -0.36
DDB1-208ENST00000537120 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
DDB1-208ENST00000537120 CEP152O94986 1710 aa12.81□□□□□ -0.36
DDB1-208ENST00000537120 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
DDB1-208ENST00000537120 ERVK-7P63135 1459 aa12.8□□□□□ -0.36
DDB1-208ENST00000537120 TOM1O60784 492 aa12.8□□□□□ -0.36
DDB1-208ENST00000537120 BCANQ96GW7 911 aa12.8□□□□□ -0.36
DDB1-208ENST00000537120 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
DDB1-208ENST00000537120 IQSEC2Q5JU85 1478 aa12.79□□□□□ -0.36
DDB1-208ENST00000537120 PIP4K2BP78356 416 aa12.79□□□□□ -0.36
DDB1-208ENST00000537120 SOCS7O14512 581 aa12.78□□□□□ -0.36
DDB1-208ENST00000537120 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.36
DDB1-208ENST00000537120 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.36
DDB1-208ENST00000537120 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
DDB1-208ENST00000537120 IDI1Q13907 227 aa12.77□□□□□ -0.37
DDB1-208ENST00000537120 ARHGAP31Q2M1Z3 1444 aa12.77□□□□□ -0.37
DDB1-208ENST00000537120 ANKRD50Q9ULJ7 1429 aa12.77□□□□□ -0.37
DDB1-208ENST00000537120 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
DDB1-208ENST00000537120 LTKP29376 864 aa12.75□□□□□ -0.37
DDB1-208ENST00000537120 SLC52A1Q9NWF4 448 aa12.75□□□□□ -0.37
DDB1-208ENST00000537120 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
DDB1-208ENST00000537120 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
DDB1-208ENST00000537120 CPS1P31327 1500 aa12.73□□□□□ -0.37
DDB1-208ENST00000537120 MED14O60244 1454 aa12.73□□□□□ -0.37
DDB1-208ENST00000537120 ADGRL2O95490 1459 aa12.73□□□□□ -0.37
DDB1-208ENST00000537120 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
DDB1-208ENST00000537120 DEPDC5O75140 1603 aa12.72□□□□□ -0.37
DDB1-208ENST00000537120 SCAF11Q99590 1463 aaKnown RBP12.72□□□□□ -0.37
DDB1-208ENST00000537120 PPP1R15AO75807 674 aaPredicted RBP12.71□□□□□ -0.37
DDB1-208ENST00000537120 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
DDB1-208ENST00000537120 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
DDB1-208ENST00000537120 TMEM2Q9UHN6 1383 aa12.7□□□□□ -0.38
DDB1-208ENST00000537120 SLC26A8Q96RN1 970 aa12.7□□□□□ -0.38
DDB1-208ENST00000537120 NUP155O75694 1391 aa12.69□□□□□ -0.38
DDB1-208ENST00000537120 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
DDB1-208ENST00000537120 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
DDB1-208ENST00000537120 HSPA1LP34931 641 aa12.68□□□□□ -0.38
DDB1-208ENST00000537120 PROSER2Q86WR7 435 aaPredicted RBP12.68□□□□□ -0.38
DDB1-208ENST00000537120 PIK3C2BO00750 1634 aa12.68□□□□□ -0.38
DDB1-208ENST00000537120 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
DDB1-208ENST00000537120 VWDEQ8N2E2 1590 aa12.67□□□□□ -0.38
DDB1-208ENST00000537120 SLIT1O75093 1534 aa12.67□□□□□ -0.38
DDB1-208ENST00000537120 NOS1P29475 1434 aa12.66□□□□□ -0.38
DDB1-208ENST00000537120 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.66□□□□□ -0.38
DDB1-208ENST00000537120 ARHGAP23Q9P227 1491 aa12.65□□□□□ -0.38
DDB1-208ENST00000537120 KCNA6P17658 529 aa12.65□□□□□ -0.38
DDB1-208ENST00000537120 NUTM2DQ5VT03 806 aaPredicted RBP12.65□□□□□ -0.38
DDB1-208ENST00000537120 TRIM52Q96A61 297 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms