RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 IQSEC2Q5JU85 1478 aa31.13■■■□□ 2.57
TNFRSF1B-204ENST00000536782 MAP3K1Q13233 1512 aa31.13■■■□□ 2.57
TNFRSF1B-204ENST00000536782 DNMT1P26358 1616 aaKnown RBP31.11■■■□□ 2.57
TNFRSF1B-204ENST00000536782 KANK4Q5T7N3 995 aaPredicted RBP31.11■■■□□ 2.57
TNFRSF1B-204ENST00000536782 PKD2Q13563 968 aa31.1■■■□□ 2.57
TNFRSF1B-204ENST00000536782 FAM135AQ9P2D6 1515 aa31.08■■■□□ 2.57
TNFRSF1B-204ENST00000536782 A2ML1A8K2U0 1454 aa31.08■■■□□ 2.57
TNFRSF1B-204ENST00000536782 KDM5DQ9BY66 1539 aa31.08■■■□□ 2.57
TNFRSF1B-204ENST00000536782 WASHC2CQ9Y4E1 1318 aa31.07■■■□□ 2.56
TNFRSF1B-204ENST00000536782 ZNF335Q9H4Z2 1342 aaPredicted RBP31.06■■■□□ 2.56
TNFRSF1B-204ENST00000536782 PZPP20742 1482 aa31.03■■■□□ 2.56
TNFRSF1B-204ENST00000536782 FBXO31Q5XUX0 539 aaPredicted RBP31.03■■■□□ 2.56
TNFRSF1B-204ENST00000536782 MYOM3Q5VTT5 1437 aa31.03■■■□□ 2.56
TNFRSF1B-204ENST00000536782 MIA2Q96PC5 1412 aa31.03■■■□□ 2.56
TNFRSF1B-204ENST00000536782 TNRQ92752 1358 aa31.03■■■□□ 2.56
TNFRSF1B-204ENST00000536782 POLR1AO95602 1720 aaPredicted RBP31.01■■■□□ 2.56
TNFRSF1B-204ENST00000536782 MAST1Q9Y2H9 1570 aa31■■■□□ 2.55
TNFRSF1B-204ENST00000536782 NEURL4Q96JN8 1562 aa30.98■■■□□ 2.55
TNFRSF1B-204ENST00000536782 RNF17Q9BXT8 1623 aaKnown RBP30.97■■■□□ 2.55
TNFRSF1B-204ENST00000536782 APLP2Q06481 763 aa30.95■■■□□ 2.55
TNFRSF1B-204ENST00000536782 DISP3Q9P2K9 1392 aa30.92■■■□□ 2.54
TNFRSF1B-204ENST00000536782 ILDR2Q71H61 639 aa30.9■■■□□ 2.54
TNFRSF1B-204ENST00000536782 MROH1Q8NDA8 1641 aa30.9■■■□□ 2.54
TNFRSF1B-204ENST00000536782 EIF2AK4Q9P2K8 1649 aaKnown RBP30.89■■■□□ 2.54
TNFRSF1B-204ENST00000536782 NLRP1Q9C000 1473 aa30.88■■■□□ 2.53
TNFRSF1B-204ENST00000536782 ABCC3O15438 1527 aa30.88■■■□□ 2.53
TNFRSF1B-204ENST00000536782 SPATA31D1Q6ZQQ2 1576 aa30.87■■■□□ 2.53
TNFRSF1B-204ENST00000536782 ZC3H13Q5T200 1668 aaKnown RBP30.87■■■□□ 2.53
TNFRSF1B-204ENST00000536782 CFAP65Q6ZU64 1925 aaKnown RBP30.86■■■□□ 2.53
TNFRSF1B-204ENST00000536782 THEMISQ8N1K5 641 aaPredicted RBP30.86■■■□□ 2.53
TNFRSF1B-204ENST00000536782 DUOX2Q9NRD8 1548 aa30.84■■■□□ 2.53
TNFRSF1B-204ENST00000536782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.83■■■□□ 2.532e-7■■■□□ 18.1
TNFRSF1B-204ENST00000536782 ANKLE2Q86XL3 938 aa30.83■■■□□ 2.53
TNFRSF1B-204ENST00000536782 CEP152O94986 1710 aa30.83■■■□□ 2.53
TNFRSF1B-204ENST00000536782 UGGT1Q9NYU2 1555 aa30.83■■■□□ 2.53
TNFRSF1B-204ENST00000536782 UBAP1LF5GYI3 381 aa30.82■■■□□ 2.52
TNFRSF1B-204ENST00000536782 DEPDC5O75140 1603 aa30.8■■■□□ 2.52
TNFRSF1B-204ENST00000536782 SHANK2Q9UPX8 1470 aa30.8■■■□□ 2.52
TNFRSF1B-204ENST00000536782 ABCC5O15440 1437 aa30.8■■■□□ 2.52
TNFRSF1B-204ENST00000536782 PTPN23Q9H3S7 1636 aa30.8■■■□□ 2.52
TNFRSF1B-204ENST00000536782 VWDEQ8N2E2 1590 aa30.79■■■□□ 2.52
TNFRSF1B-204ENST00000536782 KIF15Q9NS87 1388 aa30.79■■■□□ 2.52
TNFRSF1B-204ENST00000536782 CROCC2H7BZ55 1655 aa30.78■■■□□ 2.52
TNFRSF1B-204ENST00000536782 MED14O60244 1454 aa30.77■■■□□ 2.52
TNFRSF1B-204ENST00000536782 RRP7BPQ9NSQ0 103 aa30.76■■■□□ 2.51
TNFRSF1B-204ENST00000536782 ERVK-7P63135 1459 aa30.76■■■□□ 2.51
TNFRSF1B-204ENST00000536782 CPS1P31327 1500 aa30.75■■■□□ 2.51
TNFRSF1B-204ENST00000536782 DAPK1P53355 1430 aa30.74■■■□□ 2.51
TNFRSF1B-204ENST00000536782 FGD6Q6ZV73 1430 aa30.74■■■□□ 2.51
TNFRSF1B-204ENST00000536782 ERBINQ96RT1 1412 aa30.74■■■□□ 2.51
TNFRSF1B-204ENST00000536782 STRCP1A6NGW2 1772 aa30.72■■■□□ 2.51
TNFRSF1B-204ENST00000536782 IQGAP1P46940 1657 aa30.72■■■□□ 2.51
TNFRSF1B-204ENST00000536782 NPHP4O75161 1426 aaPredicted RBP30.72■■■□□ 2.51
TNFRSF1B-204ENST00000536782 UBR1Q8IWV7 1749 aa30.7■■■□□ 2.51
TNFRSF1B-204ENST00000536782 PRDM15P57071 1507 aaPredicted RBP30.68■■■□□ 2.5
TNFRSF1B-204ENST00000536782 ALKQ9UM73 1620 aa30.67■■■□□ 2.5
TNFRSF1B-204ENST00000536782 ARHGAP31Q2M1Z3 1444 aa30.65■■■□□ 2.5
TNFRSF1B-204ENST00000536782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.65■■■□□ 2.5
TNFRSF1B-204ENST00000536782 ANKRD30AQ9BXX3 1397 aa30.65■■■□□ 2.5
TNFRSF1B-204ENST00000536782 CHIC2Q9UKJ5 165 aa30.64■■■□□ 2.5
TNFRSF1B-204ENST00000536782 SOCS7O14512 581 aa30.63■■■□□ 2.49
TNFRSF1B-204ENST00000536782 KANK1Q14678 1352 aa30.62■■■□□ 2.49
TNFRSF1B-204ENST00000536782 TOM1O60784 492 aa30.58■■■□□ 2.49
TNFRSF1B-204ENST00000536782 HSPA1LP34931 641 aa30.56■■■□□ 2.48
TNFRSF1B-204ENST00000536782 ARHGAP23Q9P227 1491 aa30.56■■■□□ 2.48
TNFRSF1B-204ENST00000536782 PIP4K2BP78356 416 aa30.55■■■□□ 2.48
TNFRSF1B-204ENST00000536782 SCAF1Q9H7N4 1312 aaKnown RBP30.54■■■□□ 2.48
TNFRSF1B-204ENST00000536782 SLIT1O75093 1534 aa30.54■■■□□ 2.48
TNFRSF1B-204ENST00000536782 LRRC7Q96NW7 1537 aa30.53■■■□□ 2.48
TNFRSF1B-204ENST00000536782 FAM50AQ14320 339 aaKnown RBP30.53■■■□□ 2.48
TNFRSF1B-204ENST00000536782 PIK3C2BO00750 1634 aa30.53■■■□□ 2.48
TNFRSF1B-204ENST00000536782 SCAF11Q99590 1463 aaKnown RBP30.52■■■□□ 2.48
TNFRSF1B-204ENST00000536782 LTKP29376 864 aa30.51■■■□□ 2.47
TNFRSF1B-204ENST00000536782 LMTK2Q8IWU2 1503 aa30.51■■■□□ 2.47
TNFRSF1B-204ENST00000536782 SYNMO15061 1565 aa30.5■■■□□ 2.47
TNFRSF1B-204ENST00000536782 TXNDC2Q86VQ3 553 aa30.5■■■□□ 2.47
TNFRSF1B-204ENST00000536782 ADGRL2O95490 1459 aa30.5■■■□□ 2.47
TNFRSF1B-204ENST00000536782 XIRP1Q702N8 1843 aaKnown RBP30.5■■■□□ 2.47
TNFRSF1B-204ENST00000536782 EID1Q9Y6B2 187 aa30.48■■■□□ 2.47
TNFRSF1B-204ENST00000536782 MED1Q15648 1581 aaPredicted RBP30.47■■■□□ 2.47
TNFRSF1B-204ENST00000536782 STAG3Q9UJ98 1225 aa30.47■■■□□ 2.47
TNFRSF1B-204ENST00000536782 KDM5AP29375 1690 aaKnown RBP30.44■■■□□ 2.46
TNFRSF1B-204ENST00000536782 TMEM2Q9UHN6 1383 aa30.42■■■□□ 2.46
TNFRSF1B-204ENST00000536782 IDI1Q13907 227 aa30.42■■■□□ 2.46
TNFRSF1B-204ENST00000536782 ANKRD50Q9ULJ7 1429 aa30.41■■■□□ 2.46
TNFRSF1B-204ENST00000536782 EFCAB6Q5THR3 1501 aa30.4■■■□□ 2.46
TNFRSF1B-204ENST00000536782 NOS1P29475 1434 aa30.38■■■□□ 2.45
TNFRSF1B-204ENST00000536782 SLC52A1Q9NWF4 448 aa30.34■■■□□ 2.45
TNFRSF1B-204ENST00000536782 TET3O43151 1660 aa30.32■■■□□ 2.44
TNFRSF1B-204ENST00000536782 RPRD2Q5VT52 1461 aaKnown RBP30.31■■■□□ 2.44
TNFRSF1B-204ENST00000536782 MYO5BQ9ULV0 1848 aa30.31■■■□□ 2.44
TNFRSF1B-204ENST00000536782 ADGRB3O60242 1522 aa30.28■■■□□ 2.44
TNFRSF1B-204ENST00000536782 ROCK1Q13464 1354 aa30.24■■■□□ 2.43
TNFRSF1B-204ENST00000536782 SLC26A8Q96RN1 970 aa30.23■■■□□ 2.43
TNFRSF1B-204ENST00000536782 SENP3Q9H4L4 574 aaPredicted RBP30.22■■■□□ 2.43
TNFRSF1B-204ENST00000536782 UNC13BO14795 1591 aa30.21■■■□□ 2.43
TNFRSF1B-204ENST00000536782 KCNA6P17658 529 aa30.21■■■□□ 2.43
TNFRSF1B-204ENST00000536782 GCC2Q8IWJ2 1684 aa30.2■■■□□ 2.42
TNFRSF1B-204ENST00000536782 BCANQ96GW7 911 aa30.19■■■□□ 2.42
TNFRSF1B-204ENST00000536782 NWD1Q149M9 1564 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms