RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 EIF2AK4Q9P2K8 1649 aaKnown RBP23.4■■□□□ 1.34
UBC-204ENST00000536661 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.34
UBC-204ENST00000536661 ZNF142P52746 1687 aaPredicted RBP23.39■■□□□ 1.34
UBC-204ENST00000536661 PTPRKQ15262 1439 aa23.39■■□□□ 1.33
UBC-204ENST00000536661 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
UBC-204ENST00000536661 SHANK2Q9UPX8 1470 aa23.37■■□□□ 1.33
UBC-204ENST00000536661 ABCC5O15440 1437 aa23.36■■□□□ 1.33
UBC-204ENST00000536661 CEP170BQ9Y4F5 1589 aaPredicted RBP23.34■■□□□ 1.33
UBC-204ENST00000536661 DAPK1P53355 1430 aa23.33■■□□□ 1.33
UBC-204ENST00000536661 DUOX2Q9NRD8 1548 aa23.33■■□□□ 1.33
UBC-204ENST00000536661 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
UBC-204ENST00000536661 ZC3H13Q5T200 1668 aaKnown RBP23.33■■□□□ 1.33
UBC-204ENST00000536661 CAMSAP1Q5T5Y3 1602 aa23.31■■□□□ 1.32
UBC-204ENST00000536661 CEP152O94986 1710 aa23.3■■□□□ 1.32
UBC-204ENST00000536661 PZPP20742 1482 aa23.3■■□□□ 1.32
UBC-204ENST00000536661 NCOA1Q15788 1441 aa23.29■■□□□ 1.32
UBC-204ENST00000536661 CERKQ8TCT0 537 aa23.29■■□□□ 1.32
UBC-204ENST00000536661 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
UBC-204ENST00000536661 ABCC3O15438 1527 aa23.28■■□□□ 1.32
UBC-204ENST00000536661 KIF15Q9NS87 1388 aa23.27■■□□□ 1.32
UBC-204ENST00000536661 WASHC2CQ9Y4E1 1318 aa23.27■■□□□ 1.32
UBC-204ENST00000536661 PTPRTO14522 1441 aa23.26■■□□□ 1.31
UBC-204ENST00000536661 ERBINQ96RT1 1412 aa23.24■■□□□ 1.31
UBC-204ENST00000536661 A2ML1A8K2U0 1454 aa23.24■■□□□ 1.31
UBC-204ENST00000536661 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
UBC-204ENST00000536661 DEPDC5O75140 1603 aa23.23■■□□□ 1.31
UBC-204ENST00000536661 FBXO31Q5XUX0 539 aaPredicted RBP23.22■■□□□ 1.31
UBC-204ENST00000536661 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
UBC-204ENST00000536661 TNRQ92752 1358 aa23.22■■□□□ 1.31
UBC-204ENST00000536661 PLA2R1Q13018 1463 aa23.21■■□□□ 1.31
UBC-204ENST00000536661 CFAP65Q6ZU64 1925 aaKnown RBP23.19■■□□□ 1.3
UBC-204ENST00000536661 SPATA31D1Q6ZQQ2 1576 aa23.18■■□□□ 1.3
UBC-204ENST00000536661 ADGRL2O95490 1459 aa23.18■■□□□ 1.3
UBC-204ENST00000536661 ANKRD30AQ9BXX3 1397 aa23.18■■□□□ 1.3
UBC-204ENST00000536661 NCKAP5LQ9HCH0 1330 aa23.18■■□□□ 1.3
UBC-204ENST00000536661 POLR1AO95602 1720 aaPredicted RBP23.17■■□□□ 1.3
UBC-204ENST00000536661 FAM50AQ14320 339 aaKnown RBP23.17■■□□□ 1.3
UBC-204ENST00000536661 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
UBC-204ENST00000536661 LTBP4Q8N2S1 1624 aa23.15■■□□□ 1.3
UBC-204ENST00000536661 ERVK-7P63135 1459 aa23.14■■□□□ 1.29
UBC-204ENST00000536661 NLRP1Q9C000 1473 aa23.14■■□□□ 1.29
UBC-204ENST00000536661 UGGT1Q9NYU2 1555 aa23.1■■□□□ 1.29
UBC-204ENST00000536661 VWDEQ8N2E2 1590 aa23.1■■□□□ 1.29
UBC-204ENST00000536661 PKD2Q13563 968 aa23.09■■□□□ 1.29
UBC-204ENST00000536661 NEURL4Q96JN8 1562 aa23.09■■□□□ 1.29
UBC-204ENST00000536661 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
UBC-204ENST00000536661 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.28
UBC-204ENST00000536661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.07■■□□□ 1.286e-16■□□□□ 10.3
UBC-204ENST00000536661 UBR1Q8IWV7 1749 aa23.06■■□□□ 1.28
UBC-204ENST00000536661 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
UBC-204ENST00000536661 KANK1Q14678 1352 aa23.05■■□□□ 1.28
UBC-204ENST00000536661 ZNF335Q9H4Z2 1342 aaPredicted RBP23.04■■□□□ 1.28
UBC-204ENST00000536661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.03■■□□□ 1.281e-15■■■□□ 15.4
UBC-204ENST00000536661 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
UBC-204ENST00000536661 EFCAB6Q5THR3 1501 aa23.02■■□□□ 1.28
UBC-204ENST00000536661 UNC13BO14795 1591 aa23.01■■□□□ 1.27
UBC-204ENST00000536661 THEMISQ8N1K5 641 aaPredicted RBP22.99■■□□□ 1.27
UBC-204ENST00000536661 PIK3C2BO00750 1634 aa22.99■■□□□ 1.27
UBC-204ENST00000536661 ROCK1Q13464 1354 aa22.98■■□□□ 1.27
UBC-204ENST00000536661 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
UBC-204ENST00000536661 IQGAP1P46940 1657 aa22.97■■□□□ 1.27
UBC-204ENST00000536661 SYNMO15061 1565 aa22.97■■□□□ 1.27
UBC-204ENST00000536661 TET3O43151 1660 aa22.97■■□□□ 1.27
UBC-204ENST00000536661 GCC2Q8IWJ2 1684 aa22.96■■□□□ 1.27
UBC-204ENST00000536661 MED14O60244 1454 aa22.95■■□□□ 1.26
UBC-204ENST00000536661 ANKLE2Q86XL3 938 aa22.95■■□□□ 1.26
UBC-204ENST00000536661 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
UBC-204ENST00000536661 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
UBC-204ENST00000536661 ITGAEP38570 1179 aa22.92■■□□□ 1.26
UBC-204ENST00000536661 NOS1P29475 1434 aa22.91■■□□□ 1.26
UBC-204ENST00000536661 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
UBC-204ENST00000536661 SLIT1O75093 1534 aa22.91■■□□□ 1.26
UBC-204ENST00000536661 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
UBC-204ENST00000536661 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
UBC-204ENST00000536661 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
UBC-204ENST00000536661 E9PCH4 1651 aa22.88■■□□□ 1.25
UBC-204ENST00000536661 SCAF11Q99590 1463 aaKnown RBP22.88■■□□□ 1.25
UBC-204ENST00000536661 ADGRB3O60242 1522 aa22.86■■□□□ 1.25
UBC-204ENST00000536661 STRCP1A6NGW2 1772 aa22.86■■□□□ 1.25
UBC-204ENST00000536661 MYO5BQ9ULV0 1848 aa22.85■■□□□ 1.25
UBC-204ENST00000536661 CPS1P31327 1500 aa22.85■■□□□ 1.25
UBC-204ENST00000536661 IDI1Q13907 227 aa22.83■■□□□ 1.25
UBC-204ENST00000536661 UBAP1LF5GYI3 381 aa22.81■■□□□ 1.24
UBC-204ENST00000536661 TMEM2Q9UHN6 1383 aa22.8■■□□□ 1.24
UBC-204ENST00000536661 LTKP29376 864 aa22.8■■□□□ 1.24
UBC-204ENST00000536661 STAG3Q9UJ98 1225 aa22.79■■□□□ 1.24
UBC-204ENST00000536661 TXNDC2Q86VQ3 553 aa22.78■■□□□ 1.24
UBC-204ENST00000536661 TMEM131LA2VDJ0 1609 aa22.77■■□□□ 1.24
UBC-204ENST00000536661 NUP155O75694 1391 aa22.76■■□□□ 1.23
UBC-204ENST00000536661 SLC52A1Q9NWF4 448 aa22.76■■□□□ 1.23
UBC-204ENST00000536661 EID1Q9Y6B2 187 aa22.75■■□□□ 1.23
UBC-204ENST00000536661 SPHKAPQ2M3C7 1700 aa22.74■■□□□ 1.23
UBC-204ENST00000536661 NAIPQ13075 1403 aa22.74■■□□□ 1.23
UBC-204ENST00000536661 LRRC7Q96NW7 1537 aa22.7■■□□□ 1.22
UBC-204ENST00000536661 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
UBC-204ENST00000536661 ALKQ9UM73 1620 aa22.68■■□□□ 1.22
UBC-204ENST00000536661 ZFYVE9O95405 1425 aa22.68■■□□□ 1.22
UBC-204ENST00000536661 HFM1A2PYH4 1435 aa22.66■■□□□ 1.22
UBC-204ENST00000536661 DISP3Q9P2K9 1392 aa22.65■■□□□ 1.22
UBC-204ENST00000536661 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms