RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 MAP3K1Q13233 1512 aa32.61■■■□□ 2.81
LTBR-205ENST00000535739 KDM5DQ9BY66 1539 aa32.61■■■□□ 2.81
LTBR-205ENST00000535739 FBXO31Q5XUX0 539 aaPredicted RBP32.59■■■□□ 2.81
LTBR-205ENST00000535739 PKD2Q13563 968 aa32.58■■■□□ 2.81
LTBR-205ENST00000535739 A2ML1A8K2U0 1454 aa32.58■■■□□ 2.81
LTBR-205ENST00000535739 TCOF1Q13428 1488 aaKnown RBP32.58■■■□□ 2.81
LTBR-205ENST00000535739 WASHC2CQ9Y4E1 1318 aa32.57■■■□□ 2.8
LTBR-205ENST00000535739 DNMT1P26358 1616 aaKnown RBP32.57■■■□□ 2.8
LTBR-205ENST00000535739 FAM135AQ9P2D6 1515 aa32.56■■■□□ 2.8
LTBR-205ENST00000535739 PZPP20742 1482 aa32.54■■■□□ 2.8
LTBR-205ENST00000535739 TNRQ92752 1358 aa32.54■■■□□ 2.8
LTBR-205ENST00000535739 MAST1Q9Y2H9 1570 aa32.53■■■□□ 2.8
LTBR-205ENST00000535739 ZNF335Q9H4Z2 1342 aaPredicted RBP32.53■■■□□ 2.8
LTBR-205ENST00000535739 MYOM3Q5VTT5 1437 aa32.52■■■□□ 2.8
LTBR-205ENST00000535739 IQSEC2Q5JU85 1478 aa32.51■■■□□ 2.79
LTBR-205ENST00000535739 MIA2Q96PC5 1412 aa32.51■■■□□ 2.79
LTBR-205ENST00000535739 RNF17Q9BXT8 1623 aaKnown RBP32.48■■■□□ 2.79
LTBR-205ENST00000535739 POLR1AO95602 1720 aaPredicted RBP32.44■■■□□ 2.78
LTBR-205ENST00000535739 EIF2AK4Q9P2K8 1649 aaKnown RBP32.41■■■□□ 2.78
LTBR-205ENST00000535739 ABCC3O15438 1527 aa32.4■■■□□ 2.78
LTBR-205ENST00000535739 ZC3H13Q5T200 1668 aaKnown RBP32.39■■■□□ 2.78
LTBR-205ENST00000535739 NEURL4Q96JN8 1562 aa32.38■■■□□ 2.77
LTBR-205ENST00000535739 NLRP1Q9C000 1473 aa32.37■■■□□ 2.77
LTBR-205ENST00000535739 APLP2Q06481 763 aa32.37■■■□□ 2.77
LTBR-205ENST00000535739 CFAP65Q6ZU64 1925 aaKnown RBP32.37■■■□□ 2.77
LTBR-205ENST00000535739 MROH1Q8NDA8 1641 aa32.37■■■□□ 2.77
LTBR-205ENST00000535739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.36■■■□□ 2.77
LTBR-205ENST00000535739 UGGT1Q9NYU2 1555 aa32.35■■■□□ 2.77
LTBR-205ENST00000535739 CEP152O94986 1710 aa32.34■■■□□ 2.77
LTBR-205ENST00000535739 PTPN23Q9H3S7 1636 aa32.34■■■□□ 2.77
LTBR-205ENST00000535739 DUOX2Q9NRD8 1548 aa32.34■■■□□ 2.77
LTBR-205ENST00000535739 THEMISQ8N1K5 641 aaPredicted RBP32.33■■■□□ 2.77
LTBR-205ENST00000535739 CROCC2H7BZ55 1655 aa32.33■■■□□ 2.77
LTBR-205ENST00000535739 ANKLE2Q86XL3 938 aa32.32■■■□□ 2.76
LTBR-205ENST00000535739 UBAP1LF5GYI3 381 aa32.31■■■□□ 2.76
LTBR-205ENST00000535739 ABCC5O15440 1437 aa32.31■■■□□ 2.76
LTBR-205ENST00000535739 SPATA31D1Q6ZQQ2 1576 aa32.31■■■□□ 2.76
LTBR-205ENST00000535739 DISP3Q9P2K9 1392 aa32.29■■■□□ 2.76
LTBR-205ENST00000535739 KIF15Q9NS87 1388 aa32.28■■■□□ 2.76
LTBR-205ENST00000535739 ERVK-7P63135 1459 aa32.28■■■□□ 2.76
LTBR-205ENST00000535739 SHANK2Q9UPX8 1470 aa32.28■■■□□ 2.76
LTBR-205ENST00000535739 RRP7BPQ9NSQ0 103 aa32.27■■■□□ 2.76
LTBR-205ENST00000535739 DEPDC5O75140 1603 aa32.24■■■□□ 2.75
LTBR-205ENST00000535739 DAPK1P53355 1430 aa32.24■■■□□ 2.75
LTBR-205ENST00000535739 FGD6Q6ZV73 1430 aa32.24■■■□□ 2.75
LTBR-205ENST00000535739 NPHP4O75161 1426 aaPredicted RBP32.21■■■□□ 2.75
LTBR-205ENST00000535739 ERBINQ96RT1 1412 aa32.21■■■□□ 2.75
LTBR-205ENST00000535739 MED14O60244 1454 aa32.21■■■□□ 2.75
LTBR-205ENST00000535739 PRDM15P57071 1507 aaPredicted RBP32.21■■■□□ 2.75
LTBR-205ENST00000535739 CPS1P31327 1500 aa32.2■■■□□ 2.74
LTBR-205ENST00000535739 VWDEQ8N2E2 1590 aa32.19■■■□□ 2.74
LTBR-205ENST00000535739 IQGAP1P46940 1657 aa32.18■■■□□ 2.74
LTBR-205ENST00000535739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.16■■■□□ 2.741e-7■□□□□ 11
LTBR-205ENST00000535739 CHIC2Q9UKJ5 165 aa32.16■■■□□ 2.74
LTBR-205ENST00000535739 UBR1Q8IWV7 1749 aa32.16■■■□□ 2.74
LTBR-205ENST00000535739 ILDR2Q71H61 639 aa32.15■■■□□ 2.74
LTBR-205ENST00000535739 ARHGAP31Q2M1Z3 1444 aa32.13■■■□□ 2.73
LTBR-205ENST00000535739 ANKRD30AQ9BXX3 1397 aa32.1■■■□□ 2.73
LTBR-205ENST00000535739 STRCP1A6NGW2 1772 aa32.07■■■□□ 2.72
LTBR-205ENST00000535739 SCAF1Q9H7N4 1312 aaKnown RBP32.07■■■□□ 2.72
LTBR-205ENST00000535739 KANK1Q14678 1352 aa32.07■■■□□ 2.72
LTBR-205ENST00000535739 PIP4K2BP78356 416 aa32.06■■■□□ 2.72
LTBR-205ENST00000535739 TOM1O60784 492 aa32.05■■■□□ 2.72
LTBR-205ENST00000535739 SCAF11Q99590 1463 aaKnown RBP32.03■■■□□ 2.72
LTBR-205ENST00000535739 PIK3C2BO00750 1634 aa32.02■■■□□ 2.72
LTBR-205ENST00000535739 LTKP29376 864 aa32.01■■■□□ 2.71
LTBR-205ENST00000535739 ARHGAP23Q9P227 1491 aa32.01■■■□□ 2.71
LTBR-205ENST00000535739 SLIT1O75093 1534 aa32■■■□□ 2.71
LTBR-205ENST00000535739 FAM50AQ14320 339 aaKnown RBP32■■■□□ 2.71
LTBR-205ENST00000535739 TXNDC2Q86VQ3 553 aa31.99■■■□□ 2.71
LTBR-205ENST00000535739 LMTK2Q8IWU2 1503 aa31.99■■■□□ 2.71
LTBR-205ENST00000535739 ADGRL2O95490 1459 aa31.98■■■□□ 2.71
LTBR-205ENST00000535739 HSPA1LP34931 641 aa31.98■■■□□ 2.71
LTBR-205ENST00000535739 ALKQ9UM73 1620 aa31.96■■■□□ 2.71
LTBR-205ENST00000535739 LRRC7Q96NW7 1537 aa31.95■■■□□ 2.71
LTBR-205ENST00000535739 STAG3Q9UJ98 1225 aa31.93■■■□□ 2.7
LTBR-205ENST00000535739 IDI1Q13907 227 aa31.92■■■□□ 2.7
LTBR-205ENST00000535739 EID1Q9Y6B2 187 aa31.92■■■□□ 2.7
LTBR-205ENST00000535739 SYNMO15061 1565 aa31.92■■■□□ 2.7
LTBR-205ENST00000535739 EFCAB6Q5THR3 1501 aa31.9■■■□□ 2.7
LTBR-205ENST00000535739 TMEM2Q9UHN6 1383 aa31.9■■■□□ 2.7
LTBR-205ENST00000535739 SOCS7O14512 581 aa31.89■■■□□ 2.7
LTBR-205ENST00000535739 KDM5AP29375 1690 aaKnown RBP31.89■■■□□ 2.7
LTBR-205ENST00000535739 ANKRD50Q9ULJ7 1429 aa31.87■■■□□ 2.69
LTBR-205ENST00000535739 NOS1P29475 1434 aa31.86■■■□□ 2.69
LTBR-205ENST00000535739 XIRP1Q702N8 1843 aaKnown RBP31.82■■■□□ 2.68
LTBR-205ENST00000535739 ADGRB3O60242 1522 aa31.8■■■□□ 2.68
LTBR-205ENST00000535739 MED1Q15648 1581 aaPredicted RBP31.78■■■□□ 2.68
LTBR-205ENST00000535739 SENP3Q9H4L4 574 aaPredicted RBP31.77■■■□□ 2.68
LTBR-205ENST00000535739 SLC52A1Q9NWF4 448 aa31.77■■■□□ 2.68
LTBR-205ENST00000535739 TET3O43151 1660 aa31.76■■■□□ 2.68
LTBR-205ENST00000535739 RPRD2Q5VT52 1461 aaKnown RBP31.76■■■□□ 2.67
LTBR-205ENST00000535739 MYO5BQ9ULV0 1848 aa31.75■■■□□ 2.67
LTBR-205ENST00000535739 SLC26A8Q96RN1 970 aa31.73■■■□□ 2.67
LTBR-205ENST00000535739 GCC2Q8IWJ2 1684 aa31.72■■■□□ 2.67
LTBR-205ENST00000535739 UNC13BO14795 1591 aa31.72■■■□□ 2.67
LTBR-205ENST00000535739 KCNA6P17658 529 aa31.67■■■□□ 2.66
LTBR-205ENST00000535739 ROCK1Q13464 1354 aa31.67■■■□□ 2.66
LTBR-205ENST00000535739 PPARGC1BQ86YN6 1023 aaKnown RBP31.66■■■□□ 2.66
LTBR-205ENST00000535739 BCANQ96GW7 911 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms