RNA–Protein interactions for RNA: ENST00000535187.5

RAPGEF4-213, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-213ENST00000535187 KIF14Q15058 1648 aa8.11□□□□□ -1.11
RAPGEF4-213ENST00000535187 MYO3AQ8NEV4 1616 aa8.11□□□□□ -1.11
RAPGEF4-213ENST00000535187 BCANQ96GW7 911 aa8.1□□□□□ -1.11
RAPGEF4-213ENST00000535187 SHANK2Q9UPX8 1470 aa8.1□□□□□ -1.11
RAPGEF4-213ENST00000535187 ARHGAP35Q9NRY4 1499 aa8.1□□□□□ -1.11
RAPGEF4-213ENST00000535187 CDK13Q14004 1512 aaKnown RBP8.1□□□□□ -1.11
RAPGEF4-213ENST00000535187 CDK12Q9NYV4 1490 aaPredicted RBP8.1□□□□□ -1.11
RAPGEF4-213ENST00000535187 CLSPNQ9HAW4 1339 aa8.09□□□□□ -1.11
RAPGEF4-213ENST00000535187 ITGAEP38570 1179 aa8.09□□□□□ -1.11
RAPGEF4-213ENST00000535187 HNRNPMP52272 730 aaKnown RBP eCLIP8.09□□□□□ -1.11
RAPGEF4-213ENST00000535187 KDM5DQ9BY66 1539 aa8.09□□□□□ -1.11
RAPGEF4-213ENST00000535187 NUP153P49790 1475 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-213ENST00000535187 RRBP1Q9P2E9 1410 aaKnown RBP8.09□□□□□ -1.12
RAPGEF4-213ENST00000535187 AFAP1Q8N556 730 aa8.08□□□□□ -1.12
RAPGEF4-213ENST00000535187 FYCO1Q9BQS8 1478 aa8.08□□□□□ -1.12
RAPGEF4-213ENST00000535187 MED14O60244 1454 aa8.08□□□□□ -1.12
RAPGEF4-213ENST00000535187 NLRP1Q9C000 1473 aa8.08□□□□□ -1.12
RAPGEF4-213ENST00000535187 KANK1Q14678 1352 aa8.07□□□□□ -1.12
RAPGEF4-213ENST00000535187 KIF3BO15066 747 aa8.06□□□□□ -1.12
RAPGEF4-213ENST00000535187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.06□□□□□ -1.12
RAPGEF4-213ENST00000535187 HDGFP51858 240 aaKnown RBP8.05□□□□□ -1.12
RAPGEF4-213ENST00000535187 WASHC2CQ9Y4E1 1318 aa8.05□□□□□ -1.12
RAPGEF4-213ENST00000535187 ITSN2Q9NZM3 1697 aa8.05□□□□□ -1.12
RAPGEF4-213ENST00000535187 HSPA1LP34931 641 aa8.05□□□□□ -1.12
RAPGEF4-213ENST00000535187 FAM135BQ49AJ0 1406 aa8.04□□□□□ -1.12
RAPGEF4-213ENST00000535187 ADGBQ8N7X0 1667 aa8.04□□□□□ -1.12
RAPGEF4-213ENST00000535187 ABCC3O15438 1527 aa8.03□□□□□ -1.12
RAPGEF4-213ENST00000535187 ABCA6Q8N139 1617 aa8.03□□□□□ -1.12
RAPGEF4-213ENST00000535187 THEMISQ8N1K5 641 aaPredicted RBP8.03□□□□□ -1.12
RAPGEF4-213ENST00000535187 ABCC1P33527 1531 aa8.02□□□□□ -1.12
RAPGEF4-213ENST00000535187 ANKLE2Q86XL3 938 aa8.02□□□□□ -1.13
RAPGEF4-213ENST00000535187 SIGLEC1Q9BZZ2 1709 aa8.02□□□□□ -1.13
RAPGEF4-213ENST00000535187 ZMYM3Q14202 1370 aa8.02□□□□□ -1.13
RAPGEF4-213ENST00000535187 PREX2Q70Z35 1606 aa8.02□□□□□ -1.13
RAPGEF4-213ENST00000535187 PPP1R15AO75807 674 aaPredicted RBP8.01□□□□□ -1.13
RAPGEF4-213ENST00000535187 ZNF772Q68DY9 489 aaPredicted RBP8.01□□□□□ -1.13
RAPGEF4-213ENST00000535187 CHIC2Q9UKJ5 165 aa8.01□□□□□ -1.13
RAPGEF4-213ENST00000535187 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
RAPGEF4-213ENST00000535187 TRIM52Q96A61 297 aa8.01□□□□□ -1.13
RAPGEF4-213ENST00000535187 FGD6Q6ZV73 1430 aa8.01□□□□□ -1.13
RAPGEF4-213ENST00000535187 EID1Q9Y6B2 187 aa8.01□□□□□ -1.13
RAPGEF4-213ENST00000535187 KIAA1107Q9UPP5 1409 aa8.01□□□□□ -1.13
RAPGEF4-213ENST00000535187 VWDEQ8N2E2 1590 aa8□□□□□ -1.13
RAPGEF4-213ENST00000535187 ATP7AQ04656 1500 aa8□□□□□ -1.13
RAPGEF4-213ENST00000535187 DNMT1P26358 1616 aaKnown RBP8□□□□□ -1.13
RAPGEF4-213ENST00000535187 ZNF335Q9H4Z2 1342 aaPredicted RBP8□□□□□ -1.13
RAPGEF4-213ENST00000535187 NPHP4O75161 1426 aaPredicted RBP7.99□□□□□ -1.13
RAPGEF4-213ENST00000535187 ANKRD30AQ9BXX3 1397 aa7.99□□□□□ -1.13
RAPGEF4-213ENST00000535187 EHBP1L1Q8N3D4 1523 aa7.99□□□□□ -1.13
RAPGEF4-213ENST00000535187 PLXNC1O60486 1568 aa7.99□□□□□ -1.13
RAPGEF4-213ENST00000535187 IQGAP1P46940 1657 aa7.99□□□□□ -1.13
RAPGEF4-213ENST00000535187 RAB3GAP2Q9H2M9 1393 aa7.99□□□□□ -1.13
RAPGEF4-213ENST00000535187 RTEL1-TNFRSF6BF6WH68 1400 aa7.98□□□□□ -1.13
RAPGEF4-213ENST00000535187 NCOA3Q9Y6Q9 1424 aa7.98□□□□□ -1.13
RAPGEF4-213ENST00000535187 SPATA31A6Q5VVP1 1343 aa7.98□□□□□ -1.13
RAPGEF4-213ENST00000535187 ZC3H13Q5T200 1668 aaKnown RBP7.98□□□□□ -1.13
RAPGEF4-213ENST00000535187 RRP7BPQ9NSQ0 103 aa7.98□□□□□ -1.13
RAPGEF4-213ENST00000535187 PIAS4Q8N2W9 510 aaPredicted RBP7.98□□□□□ -1.13
RAPGEF4-213ENST00000535187 MYOM3Q5VTT5 1437 aa7.97□□□□□ -1.13
RAPGEF4-213ENST00000535187 TIAM1Q13009 1591 aa7.97□□□□□ -1.13
RAPGEF4-213ENST00000535187 PZPP20742 1482 aa7.97□□□□□ -1.13
RAPGEF4-213ENST00000535187 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
RAPGEF4-213ENST00000535187 TNRQ92752 1358 aa7.97□□□□□ -1.13
RAPGEF4-213ENST00000535187 KIDINS220Q9ULH0 1771 aa7.97□□□□□ -1.13
RAPGEF4-213ENST00000535187 CLTCQ00610 1675 aaKnown RBP7.96□□□□□ -1.13
RAPGEF4-213ENST00000535187 A2MP01023 1474 aa7.96□□□□□ -1.13
RAPGEF4-213ENST00000535187 CAMSAP2Q08AD1 1489 aa7.96□□□□□ -1.13
RAPGEF4-213ENST00000535187 SETD1AO15047 1707 aaKnown RBP7.96□□□□□ -1.13
RAPGEF4-213ENST00000535187 CCDC125Q86Z20 511 aa7.96□□□□□ -1.13
RAPGEF4-213ENST00000535187 JCADQ9P266 1359 aa7.96□□□□□ -1.14
RAPGEF4-213ENST00000535187 MAP3K1Q13233 1512 aa7.96□□□□□ -1.14
RAPGEF4-213ENST00000535187 NEURL4Q96JN8 1562 aa7.96□□□□□ -1.14
RAPGEF4-213ENST00000535187 KDM5AP29375 1690 aaKnown RBP7.96□□□□□ -1.14
RAPGEF4-213ENST00000535187 NCKAP5LQ9HCH0 1330 aa7.95□□□□□ -1.14
RAPGEF4-213ENST00000535187 C14orf37Q86TY3 774 aa7.95□□□□□ -1.14
RAPGEF4-213ENST00000535187 CEBPAP49715 358 aaPredicted RBP7.95□□□□□ -1.14
RAPGEF4-213ENST00000535187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.95□□□□□ -1.14
RAPGEF4-213ENST00000535187 NCOA2Q15596 1464 aa7.94□□□□□ -1.14
RAPGEF4-213ENST00000535187 INO80Q9ULG1 1556 aaPredicted RBP7.94□□□□□ -1.14
RAPGEF4-213ENST00000535187 NKTRP30414 1462 aaKnown RBP7.94□□□□□ -1.14
RAPGEF4-213ENST00000535187 PIP4K2BP78356 416 aa7.94□□□□□ -1.14
RAPGEF4-213ENST00000535187 LRRC7Q96NW7 1537 aa7.94□□□□□ -1.14
RAPGEF4-213ENST00000535187 MIA2Q96PC5 1412 aa7.93□□□□□ -1.14
RAPGEF4-213ENST00000535187 SAMD9LQ8IVG5 1584 aa7.93□□□□□ -1.14
RAPGEF4-213ENST00000535187 SETD5Q9C0A6 1442 aa7.93□□□□□ -1.14
RAPGEF4-213ENST00000535187 ZNF644Q9H582 1327 aaPredicted RBP7.93□□□□□ -1.14
RAPGEF4-213ENST00000535187 SIN3AQ96ST3 1273 aa7.93□□□□□ -1.14
RAPGEF4-213ENST00000535187 CCDC141Q6ZP82 1450 aa7.93□□□□□ -1.14
RAPGEF4-213ENST00000535187 GPATCH8Q9UKJ3 1502 aaKnown RBP7.92□□□□□ -1.14
RAPGEF4-213ENST00000535187 ZNF326Q5BKZ1 582 aaKnown RBP7.92□□□□□ -1.14
RAPGEF4-213ENST00000535187 DHX29Q7Z478 1369 aaKnown RBP7.91□□□□□ -1.14
RAPGEF4-213ENST00000535187 CDC42BPBQ9Y5S2 1711 aa7.91□□□□□ -1.14
RAPGEF4-213ENST00000535187 UGGT1Q9NYU2 1555 aa7.91□□□□□ -1.14
RAPGEF4-213ENST00000535187 MYT1Q01538 1121 aa7.9□□□□□ -1.14
RAPGEF4-213ENST00000535187 KIF15Q9NS87 1388 aa7.9□□□□□ -1.14
RAPGEF4-213ENST00000535187 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
RAPGEF4-213ENST00000535187 UPF1Q92900 1129 aaKnown RBP eCLIP7.89□□□□□ -1.15
RAPGEF4-213ENST00000535187 ZRANB1Q9UGI0 708 aa7.89□□□□□ -1.15
RAPGEF4-213ENST00000535187 LRP5O75197 1615 aa7.89□□□□□ -1.15
RAPGEF4-213ENST00000535187 ATAD2Q6PL18 1390 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms