RNA–Protein interactions for RNA: ENST00000535187.5

RAPGEF4-213, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-213ENST00000535187 NISCHQ9Y2I1 1504 aa12.3□□□□□ -0.44
RAPGEF4-213ENST00000535187 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
RAPGEF4-213ENST00000535187 ABCC9O60706 1549 aa11.45□□□□□ -0.58
RAPGEF4-213ENST00000535187 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
RAPGEF4-213ENST00000535187 NACADO15069 1562 aa11□□□□□ -0.65
RAPGEF4-213ENST00000535187 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
RAPGEF4-213ENST00000535187 AEBP2Q6ZN18 517 aaPredicted RBP10.94□□□□□ -0.66
RAPGEF4-213ENST00000535187 DNAJC5BQ9UF47 199 aa10.88□□□□□ -0.67
RAPGEF4-213ENST00000535187 MYO15BQ96JP2 1530 aa10.85□□□□□ -0.67
RAPGEF4-213ENST00000535187 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
RAPGEF4-213ENST00000535187 DNAJC5Q9H3Z4 198 aa10.78□□□□□ -0.68
RAPGEF4-213ENST00000535187 UNC13AQ9UPW8 1703 aa10.58□□□□□ -0.72
RAPGEF4-213ENST00000535187 CECR2Q9BXF3 1484 aa10.55□□□□□ -0.72
RAPGEF4-213ENST00000535187 CUX2O14529 1486 aa10.54□□□□□ -0.72
RAPGEF4-213ENST00000535187 BICRAQ9NZM4 1560 aa10.53□□□□□ -0.72
RAPGEF4-213ENST00000535187 CHIC1Q5VXU3 224 aa10.49□□□□□ -0.73
RAPGEF4-213ENST00000535187 CC2D2AQ9P2K1 1620 aa10.48□□□□□ -0.73
RAPGEF4-213ENST00000535187 DCAF1Q9Y4B6 1507 aa10.45□□□□□ -0.74
RAPGEF4-213ENST00000535187 EIF4G1Q04637 1599 aaKnown RBP10.4□□□□□ -0.74
RAPGEF4-213ENST00000535187 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.75
RAPGEF4-213ENST00000535187 ERCC6Q03468 1493 aa10.15□□□□□ -0.79
RAPGEF4-213ENST00000535187 ZCCHC6Q5VYS8 1495 aaKnown RBP10.12□□□□□ -0.79
RAPGEF4-213ENST00000535187 SCRIBQ14160 1630 aa10.08□□□□□ -0.8
RAPGEF4-213ENST00000535187 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
RAPGEF4-213ENST00000535187 HMGXB3Q12766 1538 aa10.01□□□□□ -0.81
RAPGEF4-213ENST00000535187 SMARCA2P51531 1590 aa9.98□□□□□ -0.81
RAPGEF4-213ENST00000535187 LAMC3Q9Y6N6 1575 aa9.97□□□□□ -0.81
RAPGEF4-213ENST00000535187 THOC2Q8NI27 1593 aaKnown RBP9.91□□□□□ -0.82
RAPGEF4-213ENST00000535187 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.82
RAPGEF4-213ENST00000535187 TRIM41Q8WV44 630 aa9.83□□□□□ -0.84
RAPGEF4-213ENST00000535187 ATAD2BQ9ULI0 1458 aa9.8□□□□□ -0.84
RAPGEF4-213ENST00000535187 BAZ1AQ9NRL2 1556 aaPredicted RBP9.79□□□□□ -0.84
RAPGEF4-213ENST00000535187 PEG3Q9GZU2 1588 aa9.78□□□□□ -0.84
RAPGEF4-213ENST00000535187 MRC2Q9UBG0 1479 aa9.78□□□□□ -0.84
RAPGEF4-213ENST00000535187 WDR62O43379 1518 aa9.76□□□□□ -0.85
RAPGEF4-213ENST00000535187 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
RAPGEF4-213ENST00000535187 BAZ1BQ9UIG0 1483 aaKnown RBP9.73□□□□□ -0.85
RAPGEF4-213ENST00000535187 SMARCA4P51532 1647 aa9.71□□□□□ -0.86
RAPGEF4-213ENST00000535187 KIF21AQ7Z4S6 1674 aa9.67□□□□□ -0.86
RAPGEF4-213ENST00000535187 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
RAPGEF4-213ENST00000535187 CEP164Q9UPV0 1460 aa9.62□□□□□ -0.87
RAPGEF4-213ENST00000535187 RIMBP3CA6NJZ7 1639 aa9.61□□□□□ -0.87
RAPGEF4-213ENST00000535187 RIMBP3BA6NNM3 1639 aa9.61□□□□□ -0.87
RAPGEF4-213ENST00000535187 RIMBP3Q9UFD9 1639 aa9.61□□□□□ -0.87
RAPGEF4-213ENST00000535187 NESP48681 1621 aa9.6□□□□□ -0.87
RAPGEF4-213ENST00000535187 RSF1Q96T23 1441 aaPredicted RBP9.59□□□□□ -0.87
RAPGEF4-213ENST00000535187 ABCC8Q09428 1581 aa9.55□□□□□ -0.88
RAPGEF4-213ENST00000535187 WDR97A6NE52 1622 aa9.54□□□□□ -0.88
RAPGEF4-213ENST00000535187 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
RAPGEF4-213ENST00000535187 IFT140Q96RY7 1462 aa9.52□□□□□ -0.89
RAPGEF4-213ENST00000535187 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
RAPGEF4-213ENST00000535187 SUPT5HO00267 1087 aaKnown RBP9.49□□□□□ -0.89
RAPGEF4-213ENST00000535187 FANCD2Q9BXW9 1451 aa9.46□□□□□ -0.89
RAPGEF4-213ENST00000535187 CFTRP13569 1480 aa9.42□□□□□ -0.9
RAPGEF4-213ENST00000535187 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF4-213ENST00000535187 SYNJ1O43426 1573 aa9.36□□□□□ -0.91
RAPGEF4-213ENST00000535187 PHF23Q9BUL5 403 aaPredicted RBP9.35□□□□□ -0.91
RAPGEF4-213ENST00000535187 ARAP1Q96P48 1450 aa9.35□□□□□ -0.91
RAPGEF4-213ENST00000535187 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
RAPGEF4-213ENST00000535187 CHD1O14646 1710 aa9.29□□□□□ -0.92
RAPGEF4-213ENST00000535187 EIF4G3O43432 1585 aaKnown RBP9.29□□□□□ -0.92
RAPGEF4-213ENST00000535187 CYB5RLQ6IPT4 315 aa9.29□□□□□ -0.92
RAPGEF4-213ENST00000535187 DNMBPQ6XZF7 1577 aa9.29□□□□□ -0.92
RAPGEF4-213ENST00000535187 MROH2BQ7Z745 1585 aa9.28□□□□□ -0.92
RAPGEF4-213ENST00000535187 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
RAPGEF4-213ENST00000535187 CLASP1Q7Z460 1538 aa9.27□□□□□ -0.92
RAPGEF4-213ENST00000535187 TOP2AP11388 1531 aaKnown RBP9.25□□□□□ -0.93
RAPGEF4-213ENST00000535187 ERCC6L2Q5T890 1561 aa9.24□□□□□ -0.93
RAPGEF4-213ENST00000535187 TOPBP1Q92547 1522 aa9.23□□□□□ -0.93
RAPGEF4-213ENST00000535187 TARBP1Q13395 1621 aaKnown RBP9.18□□□□□ -0.94
RAPGEF4-213ENST00000535187 SYNJ2O15056 1496 aa9.16□□□□□ -0.94
RAPGEF4-213ENST00000535187 GAPVD1Q14C86 1478 aa9.16□□□□□ -0.94
RAPGEF4-213ENST00000535187 HRCP23327 699 aa9.16□□□□□ -0.94
RAPGEF4-213ENST00000535187 GRIN2BQ13224 1484 aa9.15□□□□□ -0.94
RAPGEF4-213ENST00000535187 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.94
RAPGEF4-213ENST00000535187 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.95
RAPGEF4-213ENST00000535187 FBLN2P98095 1184 aa9.13□□□□□ -0.95
RAPGEF4-213ENST00000535187 WIZO95785 1651 aa9.11□□□□□ -0.95
RAPGEF4-213ENST00000535187 ILDR1Q86SU0 546 aaPredicted RBP9.09□□□□□ -0.95
RAPGEF4-213ENST00000535187 CHMP7Q8WUX9 453 aaPredicted RBP9.09□□□□□ -0.95
RAPGEF4-213ENST00000535187 PCGF6Q9BYE7 350 aa9.09□□□□□ -0.95
RAPGEF4-213ENST00000535187 MAPKBP1O60336 1514 aa9.08□□□□□ -0.96
RAPGEF4-213ENST00000535187 SENP3Q9H4L4 574 aaPredicted RBP9.08□□□□□ -0.96
RAPGEF4-213ENST00000535187 SNAPC4Q5SXM2 1469 aa9.07□□□□□ -0.96
RAPGEF4-213ENST00000535187 POLA1P09884 1462 aaPredicted RBP9.05□□□□□ -0.96
RAPGEF4-213ENST00000535187 KDM6BO15054 1643 aa9.05□□□□□ -0.96
RAPGEF4-213ENST00000535187 LOC105371045A0A1W2PR82 267 aa9.05□□□□□ -0.96
RAPGEF4-213ENST00000535187 KIF13AQ9H1H9 1805 aa9.05□□□□□ -0.96
RAPGEF4-213ENST00000535187 TOP2BQ02880 1626 aa9.05□□□□□ -0.96
RAPGEF4-213ENST00000535187 NPM1P06748 294 aaKnown RBP eCLIP9.04□□□□□ -0.96
RAPGEF4-213ENST00000535187 SOGA1O94964 1423 aa9.04□□□□□ -0.96
RAPGEF4-213ENST00000535187 ABCC10Q5T3U5 1492 aa9.04□□□□□ -0.96
RAPGEF4-213ENST00000535187 SHROOM2Q13796 1616 aa9.04□□□□□ -0.96
RAPGEF4-213ENST00000535187 FBXO41Q8TF61 875 aa9.03□□□□□ -0.96
RAPGEF4-213ENST00000535187 AQRO60306 1485 aaKnown RBP eCLIP9.02□□□□□ -0.97
RAPGEF4-213ENST00000535187 PBRM1Q86U86 1689 aa9.02□□□□□ -0.97
RAPGEF4-213ENST00000535187 CCDC88BA6NC98 1476 aa9.01□□□□□ -0.97
RAPGEF4-213ENST00000535187 PPARGC1BQ86YN6 1023 aaKnown RBP9□□□□□ -0.97
RAPGEF4-213ENST00000535187 NUP160Q12769 1436 aa8.99□□□□□ -0.97
RAPGEF4-213ENST00000535187 CEP170Q5SW79 1584 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms