RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 DNMT1P26358 1616 aaKnown RBP16.29■□□□□ 0.2
CSDE1-217ENST00000534699 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
CSDE1-217ENST00000534699 PZPP20742 1482 aa16.27■□□□□ 0.2
CSDE1-217ENST00000534699 IQSEC2Q5JU85 1478 aa16.27■□□□□ 0.2
CSDE1-217ENST00000534699 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
CSDE1-217ENST00000534699 NCOA1Q15788 1441 aa16.25■□□□□ 0.19
CSDE1-217ENST00000534699 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
CSDE1-217ENST00000534699 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
CSDE1-217ENST00000534699 A2ML1A8K2U0 1454 aa16.24■□□□□ 0.19
CSDE1-217ENST00000534699 KANK4Q5T7N3 995 aaPredicted RBP16.24■□□□□ 0.19
CSDE1-217ENST00000534699 FBXO41Q8TF61 875 aa16.24■□□□□ 0.19
CSDE1-217ENST00000534699 CEBPAP49715 358 aaPredicted RBP16.23■□□□□ 0.19
CSDE1-217ENST00000534699 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
CSDE1-217ENST00000534699 PKD2Q13563 968 aa16.22■□□□□ 0.19
CSDE1-217ENST00000534699 DEPDC5O75140 1603 aa16.22■□□□□ 0.19
CSDE1-217ENST00000534699 ADGRL2O95490 1459 aa16.21■□□□□ 0.19
CSDE1-217ENST00000534699 PRDM15P57071 1507 aaPredicted RBP16.2■□□□□ 0.18
CSDE1-217ENST00000534699 ABCC5O15440 1437 aa16.2■□□□□ 0.18
CSDE1-217ENST00000534699 DAPK1P53355 1430 aa16.2■□□□□ 0.18
CSDE1-217ENST00000534699 ARHGAP31Q2M1Z3 1444 aa16.2■□□□□ 0.18
CSDE1-217ENST00000534699 KIF3BO15066 747 aa16.2■□□□□ 0.18
CSDE1-217ENST00000534699 GGT6Q6P531 493 aa16.2■□□□□ 0.18
CSDE1-217ENST00000534699 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
CSDE1-217ENST00000534699 SPATA31D1Q6ZQQ2 1576 aa16.19■□□□□ 0.18
CSDE1-217ENST00000534699 ABCC3O15438 1527 aa16.19■□□□□ 0.18
CSDE1-217ENST00000534699 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
CSDE1-217ENST00000534699 HSPA2P54652 639 aa16.18■□□□□ 0.18
CSDE1-217ENST00000534699 TNRQ92752 1358 aa16.17■□□□□ 0.18
CSDE1-217ENST00000534699 ANKRD30AQ9BXX3 1397 aa16.17■□□□□ 0.18
CSDE1-217ENST00000534699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.17■□□□□ 0.18
CSDE1-217ENST00000534699 LMTK2Q8IWU2 1503 aa16.17■□□□□ 0.18
CSDE1-217ENST00000534699 ILDR1Q86SU0 546 aaPredicted RBP16.17■□□□□ 0.18
CSDE1-217ENST00000534699 KDM5AP29375 1690 aaKnown RBP16.17■□□□□ 0.18
CSDE1-217ENST00000534699 POLR1AO95602 1720 aaPredicted RBP16.16■□□□□ 0.18
CSDE1-217ENST00000534699 WASHC2CQ9Y4E1 1318 aa16.15■□□□□ 0.18
CSDE1-217ENST00000534699 KIF15Q9NS87 1388 aa16.14■□□□□ 0.17
CSDE1-217ENST00000534699 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
CSDE1-217ENST00000534699 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
CSDE1-217ENST00000534699 CERKQ8TCT0 537 aa16.13■□□□□ 0.17
CSDE1-217ENST00000534699 KANK1Q14678 1352 aa16.13■□□□□ 0.17
CSDE1-217ENST00000534699 CEP152O94986 1710 aa16.12■□□□□ 0.17
CSDE1-217ENST00000534699 ERVK-7P63135 1459 aa16.11■□□□□ 0.17
CSDE1-217ENST00000534699 LTBP4Q8N2S1 1624 aa16.1■□□□□ 0.17
CSDE1-217ENST00000534699 MED14O60244 1454 aa16.1■□□□□ 0.17
CSDE1-217ENST00000534699 ROCK1Q13464 1354 aa16.1■□□□□ 0.17
CSDE1-217ENST00000534699 THEMISQ8N1K5 641 aaPredicted RBP16.09■□□□□ 0.17
CSDE1-217ENST00000534699 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
CSDE1-217ENST00000534699 RPRD2Q5VT52 1461 aaKnown RBP16.07■□□□□ 0.16
CSDE1-217ENST00000534699 CPS1P31327 1500 aa16.06■□□□□ 0.16
CSDE1-217ENST00000534699 UNC13BO14795 1591 aa16.04■□□□□ 0.16
CSDE1-217ENST00000534699 UBR1Q8IWV7 1749 aa16.04■□□□□ 0.16
CSDE1-217ENST00000534699 GCC2Q8IWJ2 1684 aa16.04■□□□□ 0.16
CSDE1-217ENST00000534699 NEURL4Q96JN8 1562 aa16.04■□□□□ 0.16
CSDE1-217ENST00000534699 SLIT1O75093 1534 aa16.03■□□□□ 0.16
CSDE1-217ENST00000534699 TET3O43151 1660 aa16.03■□□□□ 0.16
CSDE1-217ENST00000534699 EFCAB6Q5THR3 1501 aa16.02■□□□□ 0.16
CSDE1-217ENST00000534699 ANKLE2Q86XL3 938 aa16.02■□□□□ 0.16
CSDE1-217ENST00000534699 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
CSDE1-217ENST00000534699 IQGAP1P46940 1657 aa16■□□□□ 0.15
CSDE1-217ENST00000534699 ANKRD50Q9ULJ7 1429 aa16■□□□□ 0.15
CSDE1-217ENST00000534699 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
CSDE1-217ENST00000534699 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
CSDE1-217ENST00000534699 NOS1P29475 1434 aa15.98■□□□□ 0.15
CSDE1-217ENST00000534699 NCKAP5LQ9HCH0 1330 aa15.98■□□□□ 0.15
CSDE1-217ENST00000534699 NPHP4O75161 1426 aaPredicted RBP15.98■□□□□ 0.15
CSDE1-217ENST00000534699 SYNMO15061 1565 aa15.97■□□□□ 0.15
CSDE1-217ENST00000534699 IQGAP3Q86VI3 1631 aa15.97■□□□□ 0.15
CSDE1-217ENST00000534699 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
CSDE1-217ENST00000534699 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
CSDE1-217ENST00000534699 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
CSDE1-217ENST00000534699 SCAF11Q99590 1463 aaKnown RBP15.94■□□□□ 0.14
CSDE1-217ENST00000534699 FAM50AQ14320 339 aaKnown RBP15.94■□□□□ 0.14
CSDE1-217ENST00000534699 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
CSDE1-217ENST00000534699 ADGRB3O60242 1522 aa15.93■□□□□ 0.14
CSDE1-217ENST00000534699 CFAP65Q6ZU64 1925 aaKnown RBP15.9■□□□□ 0.14
CSDE1-217ENST00000534699 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
CSDE1-217ENST00000534699 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
CSDE1-217ENST00000534699 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
CSDE1-217ENST00000534699 CHIC2Q9UKJ5 165 aa15.88■□□□□ 0.13
CSDE1-217ENST00000534699 E9PCH4 1651 aa15.86■□□□□ 0.13
CSDE1-217ENST00000534699 ZNF335Q9H4Z2 1342 aaPredicted RBP15.86■□□□□ 0.13
CSDE1-217ENST00000534699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.131e-10■■□□□ 13.5
CSDE1-217ENST00000534699 TMEM131LA2VDJ0 1609 aa15.84■□□□□ 0.13
CSDE1-217ENST00000534699 DIP2AQ14689 1571 aa15.84■□□□□ 0.13
CSDE1-217ENST00000534699 NWD1Q149M9 1564 aa15.82■□□□□ 0.12
CSDE1-217ENST00000534699 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.82■□□□□ 0.12
CSDE1-217ENST00000534699 TXNDC2Q86VQ3 553 aa15.81■□□□□ 0.12
CSDE1-217ENST00000534699 IDI1Q13907 227 aa15.81■□□□□ 0.12
CSDE1-217ENST00000534699 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
CSDE1-217ENST00000534699 SPHKAPQ2M3C7 1700 aa15.81■□□□□ 0.12
CSDE1-217ENST00000534699 TOM1O60784 492 aa15.81■□□□□ 0.12
CSDE1-217ENST00000534699 NKTRP30414 1462 aaKnown RBP15.8■□□□□ 0.12
CSDE1-217ENST00000534699 STRCP1A6NGW2 1772 aa15.79■□□□□ 0.12
CSDE1-217ENST00000534699 ZFYVE9O95405 1425 aa15.79■□□□□ 0.12
CSDE1-217ENST00000534699 LRRC7Q96NW7 1537 aa15.79■□□□□ 0.12
CSDE1-217ENST00000534699 NCOA3Q9Y6Q9 1424 aa15.79■□□□□ 0.12
CSDE1-217ENST00000534699 PLEKHG1Q9ULL1 1385 aa15.79■□□□□ 0.12
CSDE1-217ENST00000534699 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
CSDE1-217ENST00000534699 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
CSDE1-217ENST00000534699 NUP155O75694 1391 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms