RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 TSPY4P0CV99 314 aa17.01■□□□□ 0.31
SDHD-208ENST00000534010 TSPY10P0CW01 314 aa17.01■□□□□ 0.31
SDHD-208ENST00000534010 DAPK1P53355 1430 aa17.01■□□□□ 0.31
SDHD-208ENST00000534010 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
SDHD-208ENST00000534010 DEPDC5O75140 1603 aa17■□□□□ 0.31
SDHD-208ENST00000534010 PZPP20742 1482 aa16.99■□□□□ 0.31
SDHD-208ENST00000534010 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
SDHD-208ENST00000534010 PRDM15P57071 1507 aaPredicted RBP16.98■□□□□ 0.31
SDHD-208ENST00000534010 GGT6Q6P531 493 aa16.98■□□□□ 0.31
SDHD-208ENST00000534010 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
SDHD-208ENST00000534010 ABCC3O15438 1527 aa16.97■□□□□ 0.31
SDHD-208ENST00000534010 KIF3BO15066 747 aa16.97■□□□□ 0.31
SDHD-208ENST00000534010 APLP2Q06481 763 aa16.97■□□□□ 0.31
SDHD-208ENST00000534010 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
SDHD-208ENST00000534010 ERBINQ96RT1 1412 aa16.96■□□□□ 0.31
SDHD-208ENST00000534010 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
SDHD-208ENST00000534010 ESF1Q9H501 851 aaKnown RBP16.96■□□□□ 0.31
SDHD-208ENST00000534010 PTPRTO14522 1441 aa16.96■□□□□ 0.3
SDHD-208ENST00000534010 PLA2R1Q13018 1463 aa16.95■□□□□ 0.3
SDHD-208ENST00000534010 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
SDHD-208ENST00000534010 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
SDHD-208ENST00000534010 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
SDHD-208ENST00000534010 A2ML1A8K2U0 1454 aa16.93■□□□□ 0.3
SDHD-208ENST00000534010 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
SDHD-208ENST00000534010 CEP152O94986 1710 aa16.92■□□□□ 0.3
SDHD-208ENST00000534010 ARHGAP31Q2M1Z3 1444 aa16.91■□□□□ 0.3
SDHD-208ENST00000534010 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
SDHD-208ENST00000534010 LMTK2Q8IWU2 1503 aa16.9■□□□□ 0.3
SDHD-208ENST00000534010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.29
SDHD-208ENST00000534010 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
SDHD-208ENST00000534010 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
SDHD-208ENST00000534010 FBXO31Q5XUX0 539 aaPredicted RBP16.87■□□□□ 0.29
SDHD-208ENST00000534010 LTBP4Q8N2S1 1624 aa16.87■□□□□ 0.29
SDHD-208ENST00000534010 TNRQ92752 1358 aa16.87■□□□□ 0.29
SDHD-208ENST00000534010 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
SDHD-208ENST00000534010 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
SDHD-208ENST00000534010 ANKRD30AQ9BXX3 1397 aa16.86■□□□□ 0.29
SDHD-208ENST00000534010 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
SDHD-208ENST00000534010 POLR1AO95602 1720 aaPredicted RBP16.84■□□□□ 0.29
SDHD-208ENST00000534010 FBXO41Q8TF61 875 aa16.82■□□□□ 0.28
SDHD-208ENST00000534010 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
SDHD-208ENST00000534010 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
SDHD-208ENST00000534010 CFAP65Q6ZU64 1925 aaKnown RBP16.8■□□□□ 0.28
SDHD-208ENST00000534010 UBR1Q8IWV7 1749 aa16.8■□□□□ 0.28
SDHD-208ENST00000534010 PKD2Q13563 968 aa16.8■□□□□ 0.28
SDHD-208ENST00000534010 KDM5AP29375 1690 aaKnown RBP16.8■□□□□ 0.28
SDHD-208ENST00000534010 UNC13BO14795 1591 aa16.8■□□□□ 0.28
SDHD-208ENST00000534010 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
SDHD-208ENST00000534010 MED14O60244 1454 aa16.8■□□□□ 0.28
SDHD-208ENST00000534010 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
SDHD-208ENST00000534010 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
SDHD-208ENST00000534010 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
SDHD-208ENST00000534010 CERKQ8TCT0 537 aa16.78■□□□□ 0.28
SDHD-208ENST00000534010 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
SDHD-208ENST00000534010 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.28
SDHD-208ENST00000534010 NOS1P29475 1434 aa16.77■□□□□ 0.27
SDHD-208ENST00000534010 ARHGAP23Q9P227 1491 aa16.76■□□□□ 0.27
SDHD-208ENST00000534010 SYNMO15061 1565 aa16.76■□□□□ 0.27
SDHD-208ENST00000534010 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
SDHD-208ENST00000534010 SLIT1O75093 1534 aa16.75■□□□□ 0.27
SDHD-208ENST00000534010 TET3O43151 1660 aa16.75■□□□□ 0.27
SDHD-208ENST00000534010 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
SDHD-208ENST00000534010 RPRD2Q5VT52 1461 aaKnown RBP16.73■□□□□ 0.27
SDHD-208ENST00000534010 GCC2Q8IWJ2 1684 aa16.73■□□□□ 0.27
SDHD-208ENST00000534010 PIK3C2BO00750 1634 aa16.72■□□□□ 0.27
SDHD-208ENST00000534010 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
SDHD-208ENST00000534010 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
SDHD-208ENST00000534010 KANK1Q14678 1352 aa16.71■□□□□ 0.27
SDHD-208ENST00000534010 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
SDHD-208ENST00000534010 E9PCH4 1651 aa16.68■□□□□ 0.26
SDHD-208ENST00000534010 ZNF335Q9H4Z2 1342 aaPredicted RBP16.67■□□□□ 0.26
SDHD-208ENST00000534010 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
SDHD-208ENST00000534010 NPHP4O75161 1426 aaPredicted RBP16.65■□□□□ 0.26
SDHD-208ENST00000534010 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
SDHD-208ENST00000534010 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
SDHD-208ENST00000534010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
SDHD-208ENST00000534010 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
SDHD-208ENST00000534010 CPS1P31327 1500 aa16.63■□□□□ 0.25
SDHD-208ENST00000534010 NAIPQ13075 1403 aa16.62■□□□□ 0.25
SDHD-208ENST00000534010 IDI1Q13907 227 aa16.62■□□□□ 0.25
SDHD-208ENST00000534010 PPARGC1BQ86YN6 1023 aaKnown RBP16.62■□□□□ 0.25
SDHD-208ENST00000534010 TMEM131LA2VDJ0 1609 aa16.62■□□□□ 0.25
SDHD-208ENST00000534010 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
SDHD-208ENST00000534010 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
SDHD-208ENST00000534010 LTKP29376 864 aa16.61■□□□□ 0.25
SDHD-208ENST00000534010 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
SDHD-208ENST00000534010 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
SDHD-208ENST00000534010 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
SDHD-208ENST00000534010 HFM1A2PYH4 1435 aa16.58■□□□□ 0.24
SDHD-208ENST00000534010 XIRP1Q702N8 1843 aaKnown RBP16.55■□□□□ 0.24
SDHD-208ENST00000534010 SPHKAPQ2M3C7 1700 aa16.55■□□□□ 0.24
SDHD-208ENST00000534010 NUP155O75694 1391 aa16.54■□□□□ 0.24
SDHD-208ENST00000534010 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
SDHD-208ENST00000534010 NWD1Q149M9 1564 aa16.51■□□□□ 0.23
SDHD-208ENST00000534010 TXNDC2Q86VQ3 553 aa16.51■□□□□ 0.23
SDHD-208ENST00000534010 ITGAEP38570 1179 aa16.49■□□□□ 0.23
SDHD-208ENST00000534010 TRPM2O94759 1503 aa16.49■□□□□ 0.23
SDHD-208ENST00000534010 CHD2O14647 1828 aaKnown RBP16.47■□□□□ 0.23
SDHD-208ENST00000534010 EID1Q9Y6B2 187 aa16.47■□□□□ 0.23
SDHD-208ENST00000534010 PLEKHG1Q9ULL1 1385 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms