RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 RTEL1-TNFRSF6BF6WH68 1400 aa17.3■□□□□ 0.36
CTNND1-235ENST00000533189 TNRQ92752 1358 aa17.29■□□□□ 0.36
CTNND1-235ENST00000533189 ZNF644Q9H582 1327 aaPredicted RBP17.29■□□□□ 0.36
CTNND1-235ENST00000533189 SHANK2Q9UPX8 1470 aa17.29■□□□□ 0.36
CTNND1-235ENST00000533189 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
CTNND1-235ENST00000533189 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
CTNND1-235ENST00000533189 MBD5Q9P267 1494 aa17.27■□□□□ 0.36
CTNND1-235ENST00000533189 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
CTNND1-235ENST00000533189 KDM5DQ9BY66 1539 aa17.26■□□□□ 0.35
CTNND1-235ENST00000533189 PZPP20742 1482 aa17.26■□□□□ 0.35
CTNND1-235ENST00000533189 KIF3BO15066 747 aa17.26■□□□□ 0.35
CTNND1-235ENST00000533189 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
CTNND1-235ENST00000533189 ANKLE2Q86XL3 938 aa17.26■□□□□ 0.35
CTNND1-235ENST00000533189 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
CTNND1-235ENST00000533189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTNND1-235ENST00000533189 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
CTNND1-235ENST00000533189 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
CTNND1-235ENST00000533189 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
CTNND1-235ENST00000533189 CCDC141Q6ZP82 1450 aa17.22■□□□□ 0.35
CTNND1-235ENST00000533189 VWDEQ8N2E2 1590 aa17.22■□□□□ 0.35
CTNND1-235ENST00000533189 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
CTNND1-235ENST00000533189 UGGT1Q9NYU2 1555 aa17.21■□□□□ 0.35
CTNND1-235ENST00000533189 NLRP1Q9C000 1473 aa17.21■□□□□ 0.35
CTNND1-235ENST00000533189 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
CTNND1-235ENST00000533189 NPHP4O75161 1426 aaPredicted RBP17.2■□□□□ 0.34
CTNND1-235ENST00000533189 MIA2Q96PC5 1412 aa17.2■□□□□ 0.34
CTNND1-235ENST00000533189 MED14O60244 1454 aa17.18■□□□□ 0.34
CTNND1-235ENST00000533189 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
CTNND1-235ENST00000533189 IQGAP1P46940 1657 aa17.18■□□□□ 0.34
CTNND1-235ENST00000533189 RSPH4AQ5TD94 716 aa17.18■□□□□ 0.34
CTNND1-235ENST00000533189 ALKQ9UM73 1620 aa17.14■□□□□ 0.33
CTNND1-235ENST00000533189 TSPY4P0CV99 314 aa17.14■□□□□ 0.33
CTNND1-235ENST00000533189 TSPY10P0CW01 314 aa17.14■□□□□ 0.33
CTNND1-235ENST00000533189 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
CTNND1-235ENST00000533189 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
CTNND1-235ENST00000533189 ARHGEF5Q12774 1597 aa17.13■□□□□ 0.33
CTNND1-235ENST00000533189 ZC3H13Q5T200 1668 aaKnown RBP17.13■□□□□ 0.33
CTNND1-235ENST00000533189 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
CTNND1-235ENST00000533189 SYNMO15061 1565 aa17.12■□□□□ 0.33
CTNND1-235ENST00000533189 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
CTNND1-235ENST00000533189 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
CTNND1-235ENST00000533189 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
CTNND1-235ENST00000533189 ABCC3O15438 1527 aa17.09■□□□□ 0.33
CTNND1-235ENST00000533189 ERVK-7P63135 1459 aa17.07■□□□□ 0.32
CTNND1-235ENST00000533189 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
CTNND1-235ENST00000533189 CEP152O94986 1710 aa17.05■□□□□ 0.32
CTNND1-235ENST00000533189 UBR1Q8IWV7 1749 aa17.05■□□□□ 0.32
CTNND1-235ENST00000533189 MAST1Q9Y2H9 1570 aa17.05■□□□□ 0.32
CTNND1-235ENST00000533189 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
CTNND1-235ENST00000533189 MROH1Q8NDA8 1641 aa17.01■□□□□ 0.31
CTNND1-235ENST00000533189 XIRP1Q702N8 1843 aaKnown RBP17■□□□□ 0.31
CTNND1-235ENST00000533189 TXNDC2Q86VQ3 553 aa16.99■□□□□ 0.31
CTNND1-235ENST00000533189 SLIT1O75093 1534 aa16.98■□□□□ 0.31
CTNND1-235ENST00000533189 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
CTNND1-235ENST00000533189 DUOX2Q9NRD8 1548 aa16.97■□□□□ 0.31
CTNND1-235ENST00000533189 LTKP29376 864 aa16.97■□□□□ 0.31
CTNND1-235ENST00000533189 LRRC9Q6ZRR7 1453 aa16.97■□□□□ 0.31
CTNND1-235ENST00000533189 ARHGAP23Q9P227 1491 aa16.97■□□□□ 0.31
CTNND1-235ENST00000533189 RGS17Q9UGC6 210 aaPredicted RBP16.95■□□□□ 0.3
CTNND1-235ENST00000533189 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
CTNND1-235ENST00000533189 ARHGAP31Q2M1Z3 1444 aa16.93■□□□□ 0.3
CTNND1-235ENST00000533189 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
CTNND1-235ENST00000533189 MYOM3Q5VTT5 1437 aa16.93■□□□□ 0.3
CTNND1-235ENST00000533189 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
CTNND1-235ENST00000533189 PRDM15P57071 1507 aaPredicted RBP16.92■□□□□ 0.3
CTNND1-235ENST00000533189 KIF15Q9NS87 1388 aa16.9■□□□□ 0.3
CTNND1-235ENST00000533189 TMEM2Q9UHN6 1383 aa16.9■□□□□ 0.3
CTNND1-235ENST00000533189 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
CTNND1-235ENST00000533189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.31e-11■■□□□ 13.5
CTNND1-235ENST00000533189 TMEM94Q12767 1356 aa16.89■□□□□ 0.3
CTNND1-235ENST00000533189 ERBINQ96RT1 1412 aa16.89■□□□□ 0.29
CTNND1-235ENST00000533189 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
CTNND1-235ENST00000533189 KANK1Q14678 1352 aa16.89■□□□□ 0.29
CTNND1-235ENST00000533189 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
CTNND1-235ENST00000533189 KDM5AP29375 1690 aaKnown RBP16.88■□□□□ 0.29
CTNND1-235ENST00000533189 EFCAB6Q5THR3 1501 aa16.87■□□□□ 0.29
CTNND1-235ENST00000533189 RRP7BPQ9NSQ0 103 aa16.87■□□□□ 0.29
CTNND1-235ENST00000533189 KCNA6P17658 529 aa16.86■□□□□ 0.29
CTNND1-235ENST00000533189 KANK4Q5T7N3 995 aaPredicted RBP16.86■□□□□ 0.29
CTNND1-235ENST00000533189 POTEAQ6S8J7 498 aa16.86■□□□□ 0.29
CTNND1-235ENST00000533189 PROSER2Q86WR7 435 aaPredicted RBP16.86■□□□□ 0.29
CTNND1-235ENST00000533189 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
CTNND1-235ENST00000533189 SLC26A8Q96RN1 970 aa16.84■□□□□ 0.29
CTNND1-235ENST00000533189 ABCC5O15440 1437 aa16.83■□□□□ 0.28
CTNND1-235ENST00000533189 IDI1Q13907 227 aa16.82■□□□□ 0.28
CTNND1-235ENST00000533189 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
CTNND1-235ENST00000533189 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
CTNND1-235ENST00000533189 TET3O43151 1660 aa16.81■□□□□ 0.28
CTNND1-235ENST00000533189 PTPN23Q9H3S7 1636 aa16.81■□□□□ 0.28
CTNND1-235ENST00000533189 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
CTNND1-235ENST00000533189 MSH6P52701 1360 aa16.81■□□□□ 0.28
CTNND1-235ENST00000533189 BCANQ96GW7 911 aa16.81■□□□□ 0.28
CTNND1-235ENST00000533189 NWD1Q149M9 1564 aa16.81■□□□□ 0.28
CTNND1-235ENST00000533189 ADGRB3O60242 1522 aa16.8■□□□□ 0.28
CTNND1-235ENST00000533189 LMTK2Q8IWU2 1503 aa16.8■□□□□ 0.28
CTNND1-235ENST00000533189 SETD1AO15047 1707 aaKnown RBP16.79■□□□□ 0.28
CTNND1-235ENST00000533189 DAPK1P53355 1430 aa16.79■□□□□ 0.28
CTNND1-235ENST00000533189 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
CTNND1-235ENST00000533189 JCADQ9P266 1359 aa16.77■□□□□ 0.28
CTNND1-235ENST00000533189 SLAIN2Q9P270 581 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms