RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 KDM5DQ9BY66 1539 aa46.93■■■■■ 5.1
SSSCA1-207ENST00000533115 DUOX2Q9NRD8 1548 aa46.92■■■■■ 5.1
SSSCA1-207ENST00000533115 EIF2AK4Q9P2K8 1649 aaKnown RBP46.9■■■■■ 5.1
SSSCA1-207ENST00000533115 WASHC2CQ9Y4E1 1318 aa46.9■■■■■ 5.1
SSSCA1-207ENST00000533115 RNF17Q9BXT8 1623 aaKnown RBP46.88■■■■■ 5.1
SSSCA1-207ENST00000533115 KIF15Q9NS87 1388 aa46.87■■■■■ 5.09
SSSCA1-207ENST00000533115 RRP7BPQ9NSQ0 103 aa46.85■■■■■ 5.09
SSSCA1-207ENST00000533115 FAM50AQ14320 339 aaKnown RBP46.83■■■■■ 5.09
SSSCA1-207ENST00000533115 CHIC2Q9UKJ5 165 aa46.79■■■■■ 5.08
SSSCA1-207ENST00000533115 STRCQ7RTU9 1775 aa46.78■■■■■ 5.08
SSSCA1-207ENST00000533115 MYO3AQ8NEV4 1616 aa46.77■■■■■ 5.08
SSSCA1-207ENST00000533115 ERBINQ96RT1 1412 aa46.77■■■■■ 5.08
SSSCA1-207ENST00000533115 PZPP20742 1482 aa46.76■■■■■ 5.08
SSSCA1-207ENST00000533115 ANKRD30AQ9BXX3 1397 aa46.76■■■■■ 5.08
SSSCA1-207ENST00000533115 MROH1Q8NDA8 1641 aa46.74■■■■■ 5.07
SSSCA1-207ENST00000533115 FBXO31Q5XUX0 539 aaPredicted RBP46.72■■■■■ 5.07
SSSCA1-207ENST00000533115 ABCC3O15438 1527 aa46.71■■■■■ 5.07
SSSCA1-207ENST00000533115 ZNF142P52746 1687 aaPredicted RBP46.71■■■■■ 5.07
SSSCA1-207ENST00000533115 ZC3H13Q5T200 1668 aaKnown RBP46.71■■■■■ 5.07
SSSCA1-207ENST00000533115 PPARGC1BQ86YN6 1023 aaKnown RBP46.7■■■■■ 5.07
SSSCA1-207ENST00000533115 DMRT2Q9Y5R5 561 aa46.7■■■■■ 5.07
SSSCA1-207ENST00000533115 NCOA1Q15788 1441 aa46.7■■■■■ 5.07
SSSCA1-207ENST00000533115 CEP170BQ9Y4F5 1589 aaPredicted RBP46.68■■■■■ 5.06
SSSCA1-207ENST00000533115 ADGRL2O95490 1459 aa46.66■■■■■ 5.06
SSSCA1-207ENST00000533115 TNRQ92752 1358 aa46.65■■■■■ 5.06
SSSCA1-207ENST00000533115 CAMSAP1Q5T5Y3 1602 aa46.65■■■■■ 5.06
SSSCA1-207ENST00000533115 ILDR1Q86SU0 546 aaPredicted RBP46.61■■■■■ 5.05
SSSCA1-207ENST00000533115 PRDM15P57071 1507 aaPredicted RBP46.6■■■■■ 5.05
SSSCA1-207ENST00000533115 A2ML1A8K2U0 1454 aa46.59■■■■■ 5.05
SSSCA1-207ENST00000533115 CEP152O94986 1710 aa46.58■■■■■ 5.05
SSSCA1-207ENST00000533115 PTPRTO14522 1441 aa46.56■■■■■ 5.04
SSSCA1-207ENST00000533115 DEPDC5O75140 1603 aa46.55■■■■■ 5.04
SSSCA1-207ENST00000533115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP46.53■■■■■ 5.04
SSSCA1-207ENST00000533115 PLA2R1Q13018 1463 aa46.51■■■■■ 5.04
SSSCA1-207ENST00000533115 KANK1Q14678 1352 aa46.47■■■■■ 5.03
SSSCA1-207ENST00000533115 SPATA31D1Q6ZQQ2 1576 aa46.47■■■■■ 5.03
SSSCA1-207ENST00000533115 NLRP1Q9C000 1473 aa46.46■■■■■ 5.03
SSSCA1-207ENST00000533115 NCKAP5LQ9HCH0 1330 aa46.46■■■■■ 5.03
SSSCA1-207ENST00000533115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP46.45■■■■■ 5.03
SSSCA1-207ENST00000533115 ERVK-7P63135 1459 aa46.44■■■■■ 5.03
SSSCA1-207ENST00000533115 PKD2Q13563 968 aa46.43■■■■■ 5.02
SSSCA1-207ENST00000533115 ARHGAP31Q2M1Z3 1444 aa46.43■■■■■ 5.02
SSSCA1-207ENST00000533115 ANKRD50Q9ULJ7 1429 aa46.42■■■■■ 5.02
SSSCA1-207ENST00000533115 VWDEQ8N2E2 1590 aa46.38■■■■■ 5.01
SSSCA1-207ENST00000533115 ROCK1Q13464 1354 aa46.37■■■■■ 5.01
SSSCA1-207ENST00000533115 FBXO41Q8TF61 875 aa46.37■■■■■ 5.01
SSSCA1-207ENST00000533115 CFAP65Q6ZU64 1925 aaKnown RBP46.36■■■■■ 5.01
SSSCA1-207ENST00000533115 LMTK2Q8IWU2 1503 aa46.35■■■■■ 5.01
SSSCA1-207ENST00000533115 CERKQ8TCT0 537 aa46.35■■■■■ 5.01
SSSCA1-207ENST00000533115 UGGT1Q9NYU2 1555 aa46.34■■■■■ 5.01
SSSCA1-207ENST00000533115 ITGAEP38570 1179 aa46.33■■■■■ 5.01
SSSCA1-207ENST00000533115 THEMISQ8N1K5 641 aaPredicted RBP46.32■■■■■ 5.01
SSSCA1-207ENST00000533115 RRBP1Q9P2E9 1410 aaKnown RBP46.26■■■■■ 5
SSSCA1-207ENST00000533115 POLR1AO95602 1720 aaPredicted RBP46.2■■■■■ 4.99
SSSCA1-207ENST00000533115 EFCAB6Q5THR3 1501 aa46.19■■■■■ 4.99
SSSCA1-207ENST00000533115 ANKLE2Q86XL3 938 aa46.19■■■■■ 4.98
SSSCA1-207ENST00000533115 LTBP4Q8N2S1 1624 aa46.16■■■■■ 4.98
SSSCA1-207ENST00000533115 UNC13BO14795 1591 aa46.15■■■■■ 4.98
SSSCA1-207ENST00000533115 NEURL4Q96JN8 1562 aa46.15■■■■■ 4.98
SSSCA1-207ENST00000533115 UBR1Q8IWV7 1749 aa46.12■■■■■ 4.97
SSSCA1-207ENST00000533115 ZNF335Q9H4Z2 1342 aaPredicted RBP46.08■■■■■ 4.97
SSSCA1-207ENST00000533115 NOS1P29475 1434 aa46.06■■■■■ 4.96
SSSCA1-207ENST00000533115 TET3O43151 1660 aa46.06■■■■■ 4.96
SSSCA1-207ENST00000533115 RPRD2Q5VT52 1461 aaKnown RBP46.05■■■■■ 4.96
SSSCA1-207ENST00000533115 MED14O60244 1454 aa46.04■■■■■ 4.96
SSSCA1-207ENST00000533115 SYNMO15061 1565 aa46.03■■■■■ 4.96
SSSCA1-207ENST00000533115 PIK3C2BO00750 1634 aa46.03■■■■■ 4.96
SSSCA1-207ENST00000533115 NPHP4O75161 1426 aaPredicted RBP46.01■■■■■ 4.96
SSSCA1-207ENST00000533115 IDI1Q13907 227 aa46■■■■■ 4.95
SSSCA1-207ENST00000533115 GCC2Q8IWJ2 1684 aa45.99■■■■■ 4.95
SSSCA1-207ENST00000533115 IQGAP3Q86VI3 1631 aa45.96■■■■■ 4.95
SSSCA1-207ENST00000533115 NUP155O75694 1391 aa45.96■■■■■ 4.95
SSSCA1-207ENST00000533115 ARHGAP23Q9P227 1491 aa45.95■■■■■ 4.95
SSSCA1-207ENST00000533115 STAG3Q9UJ98 1225 aa45.95■■■■■ 4.95
SSSCA1-207ENST00000533115 SLIT1O75093 1534 aa45.94■■■■■ 4.95
SSSCA1-207ENST00000533115 SLC52A1Q9NWF4 448 aa45.93■■■■■ 4.94
SSSCA1-207ENST00000533115 IQSEC2Q5JU85 1478 aa45.93■■■■■ 4.94
SSSCA1-207ENST00000533115 KDM5AP29375 1690 aaKnown RBP45.92■■■■■ 4.94
SSSCA1-207ENST00000533115 IQGAP1P46940 1657 aa45.92■■■■■ 4.94
SSSCA1-207ENST00000533115 SCAF11Q99590 1463 aaKnown RBP45.9■■■■■ 4.94
SSSCA1-207ENST00000533115 LTKP29376 864 aa45.87■■■■■ 4.93
SSSCA1-207ENST00000533115 TXNDC2Q86VQ3 553 aa45.87■■■■■ 4.93
SSSCA1-207ENST00000533115 E9PCH4 1651 aa45.87■■■■■ 4.93
SSSCA1-207ENST00000533115 TMEM2Q9UHN6 1383 aa45.86■■■■■ 4.93
SSSCA1-207ENST00000533115 NAIPQ13075 1403 aa45.86■■■■■ 4.93
SSSCA1-207ENST00000533115 EID1Q9Y6B2 187 aa45.84■■■■■ 4.93
SSSCA1-207ENST00000533115 ADGRB3O60242 1522 aa45.82■■■■■ 4.93
SSSCA1-207ENST00000533115 CPS1P31327 1500 aa45.76■■■■■ 4.92
SSSCA1-207ENST00000533115 HFM1A2PYH4 1435 aa45.75■■■■■ 4.91
SSSCA1-207ENST00000533115 TMEM131LA2VDJ0 1609 aa45.65■■■■■ 4.9
SSSCA1-207ENST00000533115 MYO5BQ9ULV0 1848 aa45.62■■■■■ 4.89
SSSCA1-207ENST00000533115 CHGAP10645 457 aaKnown RBP45.59■■■■■ 4.89
SSSCA1-207ENST00000533115 STRCP1A6NGW2 1772 aa45.58■■■■■ 4.89
SSSCA1-207ENST00000533115 UBAP1LF5GYI3 381 aa45.57■■■■■ 4.89
SSSCA1-207ENST00000533115 ZFYVE9O95405 1425 aa45.56■■■■■ 4.88
SSSCA1-207ENST00000533115 TRIM52Q96A61 297 aa45.55■■■■■ 4.88
SSSCA1-207ENST00000533115 SPHKAPQ2M3C7 1700 aa45.55■■■■■ 4.88
SSSCA1-207ENST00000533115 RIMS2Q9UQ26 1411 aa45.54■■■■■ 4.88
SSSCA1-207ENST00000533115 HDGFP51858 240 aaKnown RBP45.52■■■■■ 4.88
SSSCA1-207ENST00000533115 LRRC7Q96NW7 1537 aa45.47■■■■■ 4.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms