RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 PZPP20742 1482 aa20.26■□□□□ 0.83
CAPN1-223ENST00000533079 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
CAPN1-223ENST00000533079 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
CAPN1-223ENST00000533079 SHANK2Q9UPX8 1470 aa20.24■□□□□ 0.83
CAPN1-223ENST00000533079 DHX29Q7Z478 1369 aaKnown RBP20.23■□□□□ 0.83
CAPN1-223ENST00000533079 DEPDC5O75140 1603 aa20.23■□□□□ 0.83
CAPN1-223ENST00000533079 TNRQ92752 1358 aa20.22■□□□□ 0.83
CAPN1-223ENST00000533079 TOM1O60784 492 aa20.22■□□□□ 0.83
CAPN1-223ENST00000533079 NLRP1Q9C000 1473 aa20.21■□□□□ 0.83
CAPN1-223ENST00000533079 VWDEQ8N2E2 1590 aa20.2■□□□□ 0.82
CAPN1-223ENST00000533079 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
CAPN1-223ENST00000533079 MED14O60244 1454 aa20.19■□□□□ 0.82
CAPN1-223ENST00000533079 CCDC141Q6ZP82 1450 aa20.19■□□□□ 0.82
CAPN1-223ENST00000533079 UGGT1Q9NYU2 1555 aa20.17■□□□□ 0.82
CAPN1-223ENST00000533079 HSPA1LP34931 641 aa20.17■□□□□ 0.82
CAPN1-223ENST00000533079 SYNMO15061 1565 aa20.17■□□□□ 0.82
CAPN1-223ENST00000533079 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
CAPN1-223ENST00000533079 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
CAPN1-223ENST00000533079 IQGAP1P46940 1657 aa20.15■□□□□ 0.82
CAPN1-223ENST00000533079 RNF17Q9BXT8 1623 aaKnown RBP20.14■□□□□ 0.81
CAPN1-223ENST00000533079 ANKLE2Q86XL3 938 aa20.14■□□□□ 0.81
CAPN1-223ENST00000533079 ALKQ9UM73 1620 aa20.13■□□□□ 0.81
CAPN1-223ENST00000533079 CAMSAP2Q08AD1 1489 aa20.13■□□□□ 0.81
CAPN1-223ENST00000533079 NPHP4O75161 1426 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-223ENST00000533079 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-223ENST00000533079 PIP4K2BP78356 416 aa20.13■□□□□ 0.81
CAPN1-223ENST00000533079 MIA2Q96PC5 1412 aa20.12■□□□□ 0.81
CAPN1-223ENST00000533079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.12■□□□□ 0.81
CAPN1-223ENST00000533079 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-223ENST00000533079 ARHGEF5Q12774 1597 aa20.12■□□□□ 0.81
CAPN1-223ENST00000533079 KIF3BO15066 747 aa20.11■□□□□ 0.81
CAPN1-223ENST00000533079 RSPH4AQ5TD94 716 aa20.11■□□□□ 0.81
CAPN1-223ENST00000533079 WASHC2CQ9Y4E1 1318 aa20.1■□□□□ 0.81
CAPN1-223ENST00000533079 FBXO31Q5XUX0 539 aaPredicted RBP20.09■□□□□ 0.81
CAPN1-223ENST00000533079 EIF2AK4Q9P2K8 1649 aaKnown RBP20.08■□□□□ 0.8
CAPN1-223ENST00000533079 NCOA2Q15596 1464 aa20.06■□□□□ 0.8
CAPN1-223ENST00000533079 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-223ENST00000533079 MAST1Q9Y2H9 1570 aa20.04■□□□□ 0.8
CAPN1-223ENST00000533079 ABCC3O15438 1527 aa20.04■□□□□ 0.8
CAPN1-223ENST00000533079 LRRC7Q96NW7 1537 aa20.04■□□□□ 0.8
CAPN1-223ENST00000533079 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
CAPN1-223ENST00000533079 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
CAPN1-223ENST00000533079 UBR1Q8IWV7 1749 aa19.99■□□□□ 0.79
CAPN1-223ENST00000533079 MROH1Q8NDA8 1641 aa19.98■□□□□ 0.79
CAPN1-223ENST00000533079 TSPY4P0CV99 314 aa19.97■□□□□ 0.79
CAPN1-223ENST00000533079 TSPY10P0CW01 314 aa19.97■□□□□ 0.79
CAPN1-223ENST00000533079 SCAF11Q99590 1463 aaKnown RBP19.97■□□□□ 0.79
CAPN1-223ENST00000533079 SLIT1O75093 1534 aa19.96■□□□□ 0.79
CAPN1-223ENST00000533079 CEP152O94986 1710 aa19.93■□□□□ 0.78
CAPN1-223ENST00000533079 ARHGAP23Q9P227 1491 aa19.93■□□□□ 0.78
CAPN1-223ENST00000533079 PRDM15P57071 1507 aaPredicted RBP19.92■□□□□ 0.78
CAPN1-223ENST00000533079 DUOX2Q9NRD8 1548 aa19.91■□□□□ 0.78
CAPN1-223ENST00000533079 ARHGAP31Q2M1Z3 1444 aa19.89■□□□□ 0.77
CAPN1-223ENST00000533079 XIRP1Q702N8 1843 aaKnown RBP19.88■□□□□ 0.77
CAPN1-223ENST00000533079 KDM5AP29375 1690 aaKnown RBP19.88■□□□□ 0.77
CAPN1-223ENST00000533079 LRRC9Q6ZRR7 1453 aa19.88■□□□□ 0.77
CAPN1-223ENST00000533079 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
CAPN1-223ENST00000533079 FAM135BQ49AJ0 1406 aa19.84■□□□□ 0.77
CAPN1-223ENST00000533079 CROCC2H7BZ55 1655 aa19.83■□□□□ 0.76
CAPN1-223ENST00000533079 MYOM3Q5VTT5 1437 aa19.83■□□□□ 0.76
CAPN1-223ENST00000533079 PIK3C2BO00750 1634 aa19.83■□□□□ 0.76
CAPN1-223ENST00000533079 MAP3K1Q13233 1512 aa19.82■□□□□ 0.76
CAPN1-223ENST00000533079 EID1Q9Y6B2 187 aa19.81■□□□□ 0.76
CAPN1-223ENST00000533079 VPS8Q8N3P4 1428 aa19.8■□□□□ 0.76
CAPN1-223ENST00000533079 TXNDC2Q86VQ3 553 aa19.8■□□□□ 0.76
CAPN1-223ENST00000533079 LTKP29376 864 aa19.79■□□□□ 0.76
CAPN1-223ENST00000533079 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-223ENST00000533079 RGS17Q9UGC6 210 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-223ENST00000533079 EFCAB6Q5THR3 1501 aa19.79■□□□□ 0.76
CAPN1-223ENST00000533079 TMEM2Q9UHN6 1383 aa19.79■□□□□ 0.76
CAPN1-223ENST00000533079 ROBO1Q9Y6N7 1651 aa19.78■□□□□ 0.76
CAPN1-223ENST00000533079 NKTRP30414 1462 aaKnown RBP19.78■□□□□ 0.76
CAPN1-223ENST00000533079 KIF15Q9NS87 1388 aa19.77■□□□□ 0.76
CAPN1-223ENST00000533079 NWD1Q149M9 1564 aa19.77■□□□□ 0.76
CAPN1-223ENST00000533079 LMTK2Q8IWU2 1503 aa19.76■□□□□ 0.75
CAPN1-223ENST00000533079 TMEM94Q12767 1356 aa19.74■□□□□ 0.75
CAPN1-223ENST00000533079 TET3O43151 1660 aa19.74■□□□□ 0.75
CAPN1-223ENST00000533079 KANK1Q14678 1352 aa19.73■□□□□ 0.75
CAPN1-223ENST00000533079 CFAP65Q6ZU64 1925 aaKnown RBP19.73■□□□□ 0.75
CAPN1-223ENST00000533079 ADGRB3O60242 1522 aa19.72■□□□□ 0.75
CAPN1-223ENST00000533079 KCNA6P17658 529 aa19.69■□□□□ 0.74
CAPN1-223ENST00000533079 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
CAPN1-223ENST00000533079 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
CAPN1-223ENST00000533079 ABCC5O15440 1437 aa19.68■□□□□ 0.74
CAPN1-223ENST00000533079 PHLPP1O60346 1717 aa19.66■□□□□ 0.74
CAPN1-223ENST00000533079 MSH6P52701 1360 aa19.66■□□□□ 0.74
CAPN1-223ENST00000533079 NOS1P29475 1434 aa19.66■□□□□ 0.74
CAPN1-223ENST00000533079 DAPK1P53355 1430 aa19.66■□□□□ 0.74
CAPN1-223ENST00000533079 POTEAQ6S8J7 498 aa19.65■□□□□ 0.74
CAPN1-223ENST00000533079 RPRD2Q5VT52 1461 aaKnown RBP19.63■□□□□ 0.73
CAPN1-223ENST00000533079 JCADQ9P266 1359 aa19.63■□□□□ 0.73
CAPN1-223ENST00000533079 PROSER2Q86WR7 435 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-223ENST00000533079 SETD1AO15047 1707 aaKnown RBP19.62■□□□□ 0.73
CAPN1-223ENST00000533079 KANK4Q5T7N3 995 aaPredicted RBP19.62■□□□□ 0.73
CAPN1-223ENST00000533079 RRP7BPQ9NSQ0 103 aa19.62■□□□□ 0.73
CAPN1-223ENST00000533079 ANKRD30AQ9BXX3 1397 aa19.61■□□□□ 0.73
CAPN1-223ENST00000533079 IDI1Q13907 227 aa19.61■□□□□ 0.73
CAPN1-223ENST00000533079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.73
CAPN1-223ENST00000533079 COL16A1Q07092 1604 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-223ENST00000533079 NCOA3Q9Y6Q9 1424 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms