RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 TSPY4P0CV99 314 aa27.97■■■□□ 2.07
SMG1-203ENST00000532700 TSPY10P0CW01 314 aa27.97■■■□□ 2.07
SMG1-203ENST00000532700 APLP2Q06481 763 aa27.97■■■□□ 2.07
SMG1-203ENST00000532700 CEP170BQ9Y4F5 1589 aaPredicted RBP27.96■■■□□ 2.07
SMG1-203ENST00000532700 CAMSAP1Q5T5Y3 1602 aa27.96■■■□□ 2.07
SMG1-203ENST00000532700 EIF2AK4Q9P2K8 1649 aaKnown RBP27.96■■■□□ 2.07
SMG1-203ENST00000532700 NCOA1Q15788 1441 aa27.93■■■□□ 2.06
SMG1-203ENST00000532700 SHANK2Q9UPX8 1470 aa27.93■■■□□ 2.06
SMG1-203ENST00000532700 DAPK1P53355 1430 aa27.92■■■□□ 2.06
SMG1-203ENST00000532700 CEP152O94986 1710 aa27.92■■■□□ 2.06
SMG1-203ENST00000532700 PPP6R1Q9UPN7 881 aa27.92■■■□□ 2.06
SMG1-203ENST00000532700 FBXO31Q5XUX0 539 aaPredicted RBP27.91■■■□□ 2.06
SMG1-203ENST00000532700 FAM135AQ9P2D6 1515 aa27.91■■■□□ 2.06
SMG1-203ENST00000532700 ABCC3O15438 1527 aa27.9■■■□□ 2.06
SMG1-203ENST00000532700 PZPP20742 1482 aa27.89■■■□□ 2.06
SMG1-203ENST00000532700 DUOX2Q9NRD8 1548 aa27.88■■■□□ 2.05
SMG1-203ENST00000532700 ZC3H13Q5T200 1668 aaKnown RBP27.87■■■□□ 2.05
SMG1-203ENST00000532700 WASHC2CQ9Y4E1 1318 aa27.85■■■□□ 2.05
SMG1-203ENST00000532700 KIF15Q9NS87 1388 aa27.85■■■□□ 2.05
SMG1-203ENST00000532700 PTPRTO14522 1441 aa27.84■■■□□ 2.05
SMG1-203ENST00000532700 FBXO41Q8TF61 875 aa27.83■■■□□ 2.05
SMG1-203ENST00000532700 A2ML1A8K2U0 1454 aa27.83■■■□□ 2.04
SMG1-203ENST00000532700 RRP7BPQ9NSQ0 103 aa27.81■■■□□ 2.04
SMG1-203ENST00000532700 NCKAP5LQ9HCH0 1330 aa27.81■■■□□ 2.04
SMG1-203ENST00000532700 TNRQ92752 1358 aa27.81■■■□□ 2.04
SMG1-203ENST00000532700 PRDM15P57071 1507 aaPredicted RBP27.81■■■□□ 2.04
SMG1-203ENST00000532700 DEPDC5O75140 1603 aa27.81■■■□□ 2.04
SMG1-203ENST00000532700 CHIC2Q9UKJ5 165 aa27.79■■■□□ 2.04
SMG1-203ENST00000532700 PLA2R1Q13018 1463 aa27.78■■■□□ 2.04
SMG1-203ENST00000532700 LTBP4Q8N2S1 1624 aa27.78■■■□□ 2.04
SMG1-203ENST00000532700 ERBINQ96RT1 1412 aa27.77■■■□□ 2.04
SMG1-203ENST00000532700 CERKQ8TCT0 537 aa27.77■■■□□ 2.04
SMG1-203ENST00000532700 CFAP65Q6ZU64 1925 aaKnown RBP27.77■■■□□ 2.04
SMG1-203ENST00000532700 SPATA31D1Q6ZQQ2 1576 aa27.76■■■□□ 2.03
SMG1-203ENST00000532700 NEURL4Q96JN8 1562 aa27.74■■■□□ 2.03
SMG1-203ENST00000532700 DMRT2Q9Y5R5 561 aa27.74■■■□□ 2.03
SMG1-203ENST00000532700 POLR1AO95602 1720 aaPredicted RBP27.74■■■□□ 2.03
SMG1-203ENST00000532700 ERVK-7P63135 1459 aa27.73■■■□□ 2.03
SMG1-203ENST00000532700 PPARGC1BQ86YN6 1023 aaKnown RBP27.73■■■□□ 2.03
SMG1-203ENST00000532700 ADGRL2O95490 1459 aa27.72■■■□□ 2.03
SMG1-203ENST00000532700 FAM50AQ14320 339 aaKnown RBP27.71■■■□□ 2.03
SMG1-203ENST00000532700 VWDEQ8N2E2 1590 aa27.68■■■□□ 2.02
SMG1-203ENST00000532700 ANKRD30AQ9BXX3 1397 aa27.67■■■□□ 2.02
SMG1-203ENST00000532700 UGGT1Q9NYU2 1555 aa27.66■■■□□ 2.02
SMG1-203ENST00000532700 NLRP1Q9C000 1473 aa27.66■■■□□ 2.02
SMG1-203ENST00000532700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.64■■■□□ 2.02
SMG1-203ENST00000532700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.63■■■□□ 2.012e-12■□□□□ 10.8
SMG1-203ENST00000532700 UBR1Q8IWV7 1749 aa27.63■■■□□ 2.01
SMG1-203ENST00000532700 ZNF335Q9H4Z2 1342 aaPredicted RBP27.63■■■□□ 2.01
SMG1-203ENST00000532700 PKD2Q13563 968 aa27.61■■■□□ 2.01
SMG1-203ENST00000532700 ARHGAP31Q2M1Z3 1444 aa27.59■■■□□ 2.01
SMG1-203ENST00000532700 LMTK2Q8IWU2 1503 aa27.59■■■□□ 2.01
SMG1-203ENST00000532700 SYNMO15061 1565 aa27.56■■■□□ 2
SMG1-203ENST00000532700 PIK3C2BO00750 1634 aa27.56■■■□□ 2
SMG1-203ENST00000532700 EFCAB6Q5THR3 1501 aa27.55■■■□□ 2
SMG1-203ENST00000532700 ANKRD50Q9ULJ7 1429 aa27.54■■■□□ 2
SMG1-203ENST00000532700 UNC13BO14795 1591 aa27.52■■■□□ 2
SMG1-203ENST00000532700 IQGAP1P46940 1657 aa27.51■■□□□ 1.99
SMG1-203ENST00000532700 MED14O60244 1454 aa27.5■■□□□ 1.99
SMG1-203ENST00000532700 KANK1Q14678 1352 aa27.49■■□□□ 1.99
SMG1-203ENST00000532700 THEMISQ8N1K5 641 aaPredicted RBP27.49■■□□□ 1.99
SMG1-203ENST00000532700 STRCP1A6NGW2 1772 aa27.48■■□□□ 1.99
SMG1-203ENST00000532700 NPHP4O75161 1426 aaPredicted RBP27.47■■□□□ 1.99
SMG1-203ENST00000532700 TET3O43151 1660 aa27.46■■□□□ 1.99
SMG1-203ENST00000532700 IQSEC2Q5JU85 1478 aa27.45■■□□□ 1.99
SMG1-203ENST00000532700 ANKLE2Q86XL3 938 aa27.45■■□□□ 1.98
SMG1-203ENST00000532700 ARHGAP23Q9P227 1491 aa27.44■■□□□ 1.98
SMG1-203ENST00000532700 NOS1P29475 1434 aa27.44■■□□□ 1.98
SMG1-203ENST00000532700 ITGAEP38570 1179 aa27.44■■□□□ 1.98
SMG1-203ENST00000532700 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
SMG1-203ENST00000532700 SLIT1O75093 1534 aa27.43■■□□□ 1.98
SMG1-203ENST00000532700 ROCK1Q13464 1354 aa27.43■■□□□ 1.98
SMG1-203ENST00000532700 E9PCH4 1651 aa27.41■■□□□ 1.98
SMG1-203ENST00000532700 MYO5BQ9ULV0 1848 aa27.39■■□□□ 1.98
SMG1-203ENST00000532700 IQGAP3Q86VI3 1631 aa27.39■■□□□ 1.98
SMG1-203ENST00000532700 LTKP29376 864 aa27.39■■□□□ 1.98
SMG1-203ENST00000532700 KDM5AP29375 1690 aaKnown RBP27.39■■□□□ 1.97
SMG1-203ENST00000532700 SCAF11Q99590 1463 aaKnown RBP27.38■■□□□ 1.97
SMG1-203ENST00000532700 RRBP1Q9P2E9 1410 aaKnown RBP27.38■■□□□ 1.97
SMG1-203ENST00000532700 IDI1Q13907 227 aa27.37■■□□□ 1.97
SMG1-203ENST00000532700 ADGRB3O60242 1522 aa27.36■■□□□ 1.97
SMG1-203ENST00000532700 CPS1P31327 1500 aa27.34■■□□□ 1.97
SMG1-203ENST00000532700 RPRD2Q5VT52 1461 aaKnown RBP27.33■■□□□ 1.97
SMG1-203ENST00000532700 TMEM2Q9UHN6 1383 aa27.32■■□□□ 1.96
SMG1-203ENST00000532700 ALKQ9UM73 1620 aa27.31■■□□□ 1.96
SMG1-203ENST00000532700 TXNDC2Q86VQ3 553 aa27.28■■□□□ 1.96
SMG1-203ENST00000532700 TMEM131LA2VDJ0 1609 aa27.27■■□□□ 1.96
SMG1-203ENST00000532700 XIRP1Q702N8 1843 aaKnown RBP27.26■■□□□ 1.95
SMG1-203ENST00000532700 UBAP1LF5GYI3 381 aa27.25■■□□□ 1.95
SMG1-203ENST00000532700 LRRC7Q96NW7 1537 aa27.25■■□□□ 1.95
SMG1-203ENST00000532700 NUP155O75694 1391 aa27.23■■□□□ 1.95
SMG1-203ENST00000532700 STAG3Q9UJ98 1225 aa27.21■■□□□ 1.95
SMG1-203ENST00000532700 NAIPQ13075 1403 aa27.21■■□□□ 1.95
SMG1-203ENST00000532700 ZFYVE9O95405 1425 aa27.2■■□□□ 1.94
SMG1-203ENST00000532700 SENP3Q9H4L4 574 aaPredicted RBP27.18■■□□□ 1.94
SMG1-203ENST00000532700 SLC52A1Q9NWF4 448 aa27.18■■□□□ 1.94
SMG1-203ENST00000532700 SPHKAPQ2M3C7 1700 aa27.17■■□□□ 1.94
SMG1-203ENST00000532700 EID1Q9Y6B2 187 aa27.16■■□□□ 1.94
SMG1-203ENST00000532700 SLC26A8Q96RN1 970 aa27.12■■□□□ 1.93
SMG1-203ENST00000532700 RIMS2Q9UQ26 1411 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms