RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TCOF1Q13428 1488 aaKnown RBP25.08■■□□□ 1.6
CHMP4A-204ENST00000530996 IQSEC2Q5JU85 1478 aa25.08■■□□□ 1.6
CHMP4A-204ENST00000530996 FAM135AQ9P2D6 1515 aa25.07■■□□□ 1.6
CHMP4A-204ENST00000530996 TNRQ92752 1358 aa25.07■■□□□ 1.6
CHMP4A-204ENST00000530996 TSPY4P0CV99 314 aa25.07■■□□□ 1.6
CHMP4A-204ENST00000530996 TSPY10P0CW01 314 aa25.07■■□□□ 1.6
CHMP4A-204ENST00000530996 WASHC2CQ9Y4E1 1318 aa25.06■■□□□ 1.6
CHMP4A-204ENST00000530996 PZPP20742 1482 aa25.05■■□□□ 1.6
CHMP4A-204ENST00000530996 LOC105371045A0A1W2PR82 267 aa25.05■■□□□ 1.6
CHMP4A-204ENST00000530996 DISP3Q9P2K9 1392 aa25.04■■□□□ 1.6
CHMP4A-204ENST00000530996 DNMT1P26358 1616 aaKnown RBP25.01■■□□□ 1.59
CHMP4A-204ENST00000530996 FBXO31Q5XUX0 539 aaPredicted RBP25.01■■□□□ 1.59
CHMP4A-204ENST00000530996 MYOM3Q5VTT5 1437 aa24.97■■□□□ 1.59
CHMP4A-204ENST00000530996 UBAP1LF5GYI3 381 aa24.96■■□□□ 1.59
CHMP4A-204ENST00000530996 SPATA31D1Q6ZQQ2 1576 aa24.96■■□□□ 1.59
CHMP4A-204ENST00000530996 KANK4Q5T7N3 995 aaPredicted RBP24.95■■□□□ 1.58
CHMP4A-204ENST00000530996 MAST1Q9Y2H9 1570 aa24.95■■□□□ 1.58
CHMP4A-204ENST00000530996 MAP3K1Q13233 1512 aa24.94■■□□□ 1.58
CHMP4A-204ENST00000530996 NLRP1Q9C000 1473 aa24.93■■□□□ 1.58
CHMP4A-204ENST00000530996 MIA2Q96PC5 1412 aa24.93■■□□□ 1.58
CHMP4A-204ENST00000530996 RNF17Q9BXT8 1623 aaKnown RBP24.93■■□□□ 1.58
CHMP4A-204ENST00000530996 POLR1AO95602 1720 aaPredicted RBP24.92■■□□□ 1.58
CHMP4A-204ENST00000530996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.92■■□□□ 1.58
CHMP4A-204ENST00000530996 UGGT1Q9NYU2 1555 aa24.91■■□□□ 1.58
CHMP4A-204ENST00000530996 ABCC3O15438 1527 aa24.91■■□□□ 1.58
CHMP4A-204ENST00000530996 NEURL4Q96JN8 1562 aa24.9■■□□□ 1.58
CHMP4A-204ENST00000530996 ZC3H13Q5T200 1668 aaKnown RBP24.9■■□□□ 1.58
CHMP4A-204ENST00000530996 EIF2AK4Q9P2K8 1649 aaKnown RBP24.9■■□□□ 1.58
CHMP4A-204ENST00000530996 APLP2Q06481 763 aa24.89■■□□□ 1.58
CHMP4A-204ENST00000530996 ANKLE2Q86XL3 938 aa24.87■■□□□ 1.57
CHMP4A-204ENST00000530996 THEMISQ8N1K5 641 aaPredicted RBP24.87■■□□□ 1.57
CHMP4A-204ENST00000530996 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
CHMP4A-204ENST00000530996 DUOX2Q9NRD8 1548 aa24.85■■□□□ 1.57
CHMP4A-204ENST00000530996 CPS1P31327 1500 aa24.84■■□□□ 1.57
CHMP4A-204ENST00000530996 ERVK-7P63135 1459 aa24.83■■□□□ 1.57
CHMP4A-204ENST00000530996 KIF15Q9NS87 1388 aa24.83■■□□□ 1.57
CHMP4A-204ENST00000530996 NPHP4O75161 1426 aaPredicted RBP24.83■■□□□ 1.57
CHMP4A-204ENST00000530996 MROH1Q8NDA8 1641 aa24.83■■□□□ 1.56
CHMP4A-204ENST00000530996 SHANK2Q9UPX8 1470 aa24.82■■□□□ 1.56
CHMP4A-204ENST00000530996 ILDR2Q71H61 639 aa24.81■■□□□ 1.56
CHMP4A-204ENST00000530996 PTPN23Q9H3S7 1636 aa24.79■■□□□ 1.56
CHMP4A-204ENST00000530996 CEP152O94986 1710 aa24.79■■□□□ 1.56
CHMP4A-204ENST00000530996 CROCC2H7BZ55 1655 aa24.78■■□□□ 1.56
CHMP4A-204ENST00000530996 PIP4K2BP78356 416 aa24.78■■□□□ 1.56
CHMP4A-204ENST00000530996 DEPDC5O75140 1603 aa24.78■■□□□ 1.56
CHMP4A-204ENST00000530996 ERBINQ96RT1 1412 aa24.78■■□□□ 1.56
CHMP4A-204ENST00000530996 RRP7BPQ9NSQ0 103 aa24.76■■□□□ 1.55
CHMP4A-204ENST00000530996 ABCC5O15440 1437 aa24.76■■□□□ 1.55
CHMP4A-204ENST00000530996 MED14O60244 1454 aa24.76■■□□□ 1.55
CHMP4A-204ENST00000530996 PRDM15P57071 1507 aaPredicted RBP24.76■■□□□ 1.55
CHMP4A-204ENST00000530996 VWDEQ8N2E2 1590 aa24.76■■□□□ 1.55
CHMP4A-204ENST00000530996 IQGAP1P46940 1657 aa24.75■■□□□ 1.55
CHMP4A-204ENST00000530996 DAPK1P53355 1430 aa24.74■■□□□ 1.55
CHMP4A-204ENST00000530996 FGD6Q6ZV73 1430 aa24.74■■□□□ 1.55
CHMP4A-204ENST00000530996 TOM1O60784 492 aa24.73■■□□□ 1.55
CHMP4A-204ENST00000530996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.73■■□□□ 1.551e-7■■■■□ 21.7
CHMP4A-204ENST00000530996 KANK1Q14678 1352 aa24.7■■□□□ 1.55
CHMP4A-204ENST00000530996 SOCS7O14512 581 aa24.68■■□□□ 1.54
CHMP4A-204ENST00000530996 CHIC2Q9UKJ5 165 aa24.68■■□□□ 1.54
CHMP4A-204ENST00000530996 SCAF11Q99590 1463 aaKnown RBP24.68■■□□□ 1.54
CHMP4A-204ENST00000530996 ANKRD30AQ9BXX3 1397 aa24.67■■□□□ 1.54
CHMP4A-204ENST00000530996 UBR1Q8IWV7 1749 aa24.66■■□□□ 1.54
CHMP4A-204ENST00000530996 HSPA1LP34931 641 aa24.66■■□□□ 1.54
CHMP4A-204ENST00000530996 ARHGAP31Q2M1Z3 1444 aa24.66■■□□□ 1.54
CHMP4A-204ENST00000530996 SYNMO15061 1565 aa24.64■■□□□ 1.54
CHMP4A-204ENST00000530996 STAG3Q9UJ98 1225 aa24.63■■□□□ 1.53
CHMP4A-204ENST00000530996 TXNDC2Q86VQ3 553 aa24.6■■□□□ 1.53
CHMP4A-204ENST00000530996 SENP3Q9H4L4 574 aaPredicted RBP24.6■■□□□ 1.53
CHMP4A-204ENST00000530996 EID1Q9Y6B2 187 aa24.6■■□□□ 1.53
CHMP4A-204ENST00000530996 SLIT1O75093 1534 aa24.6■■□□□ 1.53
CHMP4A-204ENST00000530996 LRRC7Q96NW7 1537 aa24.6■■□□□ 1.53
CHMP4A-204ENST00000530996 ARHGAP23Q9P227 1491 aa24.58■■□□□ 1.53
CHMP4A-204ENST00000530996 PIK3C2BO00750 1634 aa24.58■■□□□ 1.53
CHMP4A-204ENST00000530996 FAM50AQ14320 339 aaKnown RBP24.58■■□□□ 1.53
CHMP4A-204ENST00000530996 CFAP65Q6ZU64 1925 aaKnown RBP24.58■■□□□ 1.53
CHMP4A-204ENST00000530996 MED1Q15648 1581 aaPredicted RBP24.58■■□□□ 1.52
CHMP4A-204ENST00000530996 LTKP29376 864 aa24.56■■□□□ 1.52
CHMP4A-204ENST00000530996 LMTK2Q8IWU2 1503 aa24.56■■□□□ 1.52
CHMP4A-204ENST00000530996 STRCP1A6NGW2 1772 aa24.55■■□□□ 1.52
CHMP4A-204ENST00000530996 EFCAB6Q5THR3 1501 aa24.54■■□□□ 1.52
CHMP4A-204ENST00000530996 TMEM2Q9UHN6 1383 aa24.54■■□□□ 1.52
CHMP4A-204ENST00000530996 ALKQ9UM73 1620 aa24.53■■□□□ 1.52
CHMP4A-204ENST00000530996 ADGRL2O95490 1459 aa24.52■■□□□ 1.52
CHMP4A-204ENST00000530996 PHF23Q9BUL5 403 aaPredicted RBP24.49■■□□□ 1.51
CHMP4A-204ENST00000530996 ADGRB3O60242 1522 aa24.48■■□□□ 1.51
CHMP4A-204ENST00000530996 ANKRD50Q9ULJ7 1429 aa24.47■■□□□ 1.51
CHMP4A-204ENST00000530996 IDI1Q13907 227 aa24.46■■□□□ 1.51
CHMP4A-204ENST00000530996 NOS1P29475 1434 aa24.44■■□□□ 1.5
CHMP4A-204ENST00000530996 KDM5AP29375 1690 aaKnown RBP24.44■■□□□ 1.5
CHMP4A-204ENST00000530996 BCANQ96GW7 911 aa24.43■■□□□ 1.5
CHMP4A-204ENST00000530996 RPRD2Q5VT52 1461 aaKnown RBP24.4■■□□□ 1.5
CHMP4A-204ENST00000530996 SLC26A8Q96RN1 970 aa24.4■■□□□ 1.5
CHMP4A-204ENST00000530996 TMEM94Q12767 1356 aa24.39■■□□□ 1.49
CHMP4A-204ENST00000530996 SLC52A1Q9NWF4 448 aa24.38■■□□□ 1.49
CHMP4A-204ENST00000530996 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
CHMP4A-204ENST00000530996 TET3O43151 1660 aa24.37■■□□□ 1.49
CHMP4A-204ENST00000530996 KCNA6P17658 529 aa24.34■■□□□ 1.49
CHMP4A-204ENST00000530996 PROSER2Q86WR7 435 aaPredicted RBP24.34■■□□□ 1.49
CHMP4A-204ENST00000530996 XIRP1Q702N8 1843 aaKnown RBP24.33■■□□□ 1.48
CHMP4A-204ENST00000530996 UNC13BO14795 1591 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms