RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 PLPPR3Q6T4P5 718 aa26.84■■□□□ 1.89
USP35-202ENST00000528910 NPATQ14207 1427 aa26.83■■□□□ 1.89
USP35-202ENST00000528910 CEBPAP49715 358 aaPredicted RBP26.83■■□□□ 1.89
USP35-202ENST00000528910 DEPDC5O75140 1603 aa26.83■■□□□ 1.88
USP35-202ENST00000528910 KIF3BO15066 747 aa26.82■■□□□ 1.88
USP35-202ENST00000528910 GGT6Q6P531 493 aa26.82■■□□□ 1.88
USP35-202ENST00000528910 ZMYM3Q14202 1370 aa26.81■■□□□ 1.88
USP35-202ENST00000528910 PRDM15P57071 1507 aaPredicted RBP26.8■■□□□ 1.88
USP35-202ENST00000528910 ANKRD30AQ9BXX3 1397 aa26.79■■□□□ 1.88
USP35-202ENST00000528910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.78■■□□□ 1.88
USP35-202ENST00000528910 NCOA1Q15788 1441 aa26.78■■□□□ 1.88
USP35-202ENST00000528910 MYO3AQ8NEV4 1616 aa26.78■■□□□ 1.88
USP35-202ENST00000528910 ZNF142P52746 1687 aaPredicted RBP26.77■■□□□ 1.88
USP35-202ENST00000528910 ABCC3O15438 1527 aa26.77■■□□□ 1.88
USP35-202ENST00000528910 UHRF1BP1Q6BDS2 1440 aa26.77■■□□□ 1.88
USP35-202ENST00000528910 FAM50AQ14320 339 aaKnown RBP26.77■■□□□ 1.88
USP35-202ENST00000528910 CEP152O94986 1710 aa26.76■■□□□ 1.88
USP35-202ENST00000528910 PTPRKQ15262 1439 aa26.76■■□□□ 1.87
USP35-202ENST00000528910 PZPP20742 1482 aa26.74■■□□□ 1.87
USP35-202ENST00000528910 CAMSAP1Q5T5Y3 1602 aa26.73■■□□□ 1.87
USP35-202ENST00000528910 RRBP1Q9P2E9 1410 aaKnown RBP26.73■■□□□ 1.87
USP35-202ENST00000528910 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
USP35-202ENST00000528910 RRP7BPQ9NSQ0 103 aa26.7■■□□□ 1.86
USP35-202ENST00000528910 VWDEQ8N2E2 1590 aa26.68■■□□□ 1.86
USP35-202ENST00000528910 CHIC2Q9UKJ5 165 aa26.68■■□□□ 1.86
USP35-202ENST00000528910 ROCK1Q13464 1354 aa26.67■■□□□ 1.86
USP35-202ENST00000528910 CEP170BQ9Y4F5 1589 aaPredicted RBP26.67■■□□□ 1.86
USP35-202ENST00000528910 WASHC2CQ9Y4E1 1318 aa26.65■■□□□ 1.86
USP35-202ENST00000528910 STRCQ7RTU9 1775 aa26.64■■□□□ 1.86
USP35-202ENST00000528910 HSPA2P54652 639 aa26.64■■□□□ 1.86
USP35-202ENST00000528910 SPATA31D1Q6ZQQ2 1576 aa26.63■■□□□ 1.85
USP35-202ENST00000528910 UNC13BO14795 1591 aa26.63■■□□□ 1.85
USP35-202ENST00000528910 LMTK2Q8IWU2 1503 aa26.62■■□□□ 1.85
USP35-202ENST00000528910 ANKRD50Q9ULJ7 1429 aa26.62■■□□□ 1.85
USP35-202ENST00000528910 ARHGAP31Q2M1Z3 1444 aa26.57■■□□□ 1.84
USP35-202ENST00000528910 A2ML1A8K2U0 1454 aa26.57■■□□□ 1.84
USP35-202ENST00000528910 ERVK-7P63135 1459 aa26.57■■□□□ 1.84
USP35-202ENST00000528910 TNRQ92752 1358 aa26.57■■□□□ 1.84
USP35-202ENST00000528910 EFCAB6Q5THR3 1501 aa26.55■■□□□ 1.84
USP35-202ENST00000528910 GCC2Q8IWJ2 1684 aa26.54■■□□□ 1.84
USP35-202ENST00000528910 KANK1Q14678 1352 aa26.54■■□□□ 1.84
USP35-202ENST00000528910 NLRP1Q9C000 1473 aa26.54■■□□□ 1.84
USP35-202ENST00000528910 PLA2R1Q13018 1463 aa26.53■■□□□ 1.84
USP35-202ENST00000528910 TET3O43151 1660 aa26.52■■□□□ 1.84
USP35-202ENST00000528910 CFAP65Q6ZU64 1925 aaKnown RBP26.52■■□□□ 1.84
USP35-202ENST00000528910 FBXO31Q5XUX0 539 aaPredicted RBP26.51■■□□□ 1.83
USP35-202ENST00000528910 IQGAP3Q86VI3 1631 aa26.5■■□□□ 1.83
USP35-202ENST00000528910 POLR1AO95602 1720 aaPredicted RBP26.47■■□□□ 1.83
USP35-202ENST00000528910 ITGAEP38570 1179 aa26.45■■□□□ 1.82
USP35-202ENST00000528910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.45■■□□□ 1.82
USP35-202ENST00000528910 RPRD2Q5VT52 1461 aaKnown RBP26.43■■□□□ 1.82
USP35-202ENST00000528910 UBR1Q8IWV7 1749 aa26.43■■□□□ 1.82
USP35-202ENST00000528910 UGGT1Q9NYU2 1555 aa26.43■■□□□ 1.82
USP35-202ENST00000528910 PTPRTO14522 1441 aa26.42■■□□□ 1.82
USP35-202ENST00000528910 SYNMO15061 1565 aa26.41■■□□□ 1.82
USP35-202ENST00000528910 KDM5AP29375 1690 aaKnown RBP26.41■■□□□ 1.82
USP35-202ENST00000528910 E9PCH4 1651 aa26.4■■□□□ 1.82
USP35-202ENST00000528910 NAIPQ13075 1403 aa26.39■■□□□ 1.82
USP35-202ENST00000528910 NOS1P29475 1434 aa26.39■■□□□ 1.81
USP35-202ENST00000528910 PIK3C2BO00750 1634 aa26.38■■□□□ 1.81
USP35-202ENST00000528910 HFM1A2PYH4 1435 aa26.38■■□□□ 1.81
USP35-202ENST00000528910 NEURL4Q96JN8 1562 aa26.37■■□□□ 1.81
USP35-202ENST00000528910 ILDR1Q86SU0 546 aaPredicted RBP26.36■■□□□ 1.81
USP35-202ENST00000528910 DMRT2Q9Y5R5 561 aa26.36■■□□□ 1.81
USP35-202ENST00000528910 PKD2Q13563 968 aa26.32■■□□□ 1.8
USP35-202ENST00000528910 ADGRB3O60242 1522 aa26.29■■□□□ 1.8
USP35-202ENST00000528910 SLIT1O75093 1534 aa26.29■■□□□ 1.8
USP35-202ENST00000528910 NUP155O75694 1391 aa26.28■■□□□ 1.8
USP35-202ENST00000528910 ARHGAP23Q9P227 1491 aa26.28■■□□□ 1.8
USP35-202ENST00000528910 THEMISQ8N1K5 641 aaPredicted RBP26.27■■□□□ 1.8
USP35-202ENST00000528910 NCKAP5LQ9HCH0 1330 aa26.27■■□□□ 1.8
USP35-202ENST00000528910 MED14O60244 1454 aa26.26■■□□□ 1.79
USP35-202ENST00000528910 SPHKAPQ2M3C7 1700 aa26.25■■□□□ 1.79
USP35-202ENST00000528910 IQGAP1P46940 1657 aa26.25■■□□□ 1.79
USP35-202ENST00000528910 MYO5BQ9ULV0 1848 aa26.23■■□□□ 1.79
USP35-202ENST00000528910 LTBP4Q8N2S1 1624 aa26.23■■□□□ 1.79
USP35-202ENST00000528910 TMEM131LA2VDJ0 1609 aa26.2■■□□□ 1.78
USP35-202ENST00000528910 SCAF11Q99590 1463 aaKnown RBP26.19■■□□□ 1.78
USP35-202ENST00000528910 NPHP4O75161 1426 aaPredicted RBP26.17■■□□□ 1.78
USP35-202ENST00000528910 IDI1Q13907 227 aa26.17■■□□□ 1.78
USP35-202ENST00000528910 ANKLE2Q86XL3 938 aa26.17■■□□□ 1.78
USP35-202ENST00000528910 SLC52A1Q9NWF4 448 aa26.17■■□□□ 1.78
USP35-202ENST00000528910 TMEM2Q9UHN6 1383 aa26.15■■□□□ 1.78
USP35-202ENST00000528910 TRPM2O94759 1503 aa26.13■■□□□ 1.77
USP35-202ENST00000528910 IQSEC2Q5JU85 1478 aa26.11■■□□□ 1.77
USP35-202ENST00000528910 FBXO41Q8TF61 875 aa26.1■■□□□ 1.77
USP35-202ENST00000528910 CERKQ8TCT0 537 aa26.09■■□□□ 1.77
USP35-202ENST00000528910 CLTCL1P53675 1640 aa26.08■■□□□ 1.77
USP35-202ENST00000528910 ZFYVE9O95405 1425 aa26.07■■□□□ 1.76
USP35-202ENST00000528910 ZNF335Q9H4Z2 1342 aaPredicted RBP26.07■■□□□ 1.76
USP35-202ENST00000528910 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
USP35-202ENST00000528910 LTKP29376 864 aa26.05■■□□□ 1.76
USP35-202ENST00000528910 STRCP1A6NGW2 1772 aa26.05■■□□□ 1.76
USP35-202ENST00000528910 CPS1P31327 1500 aa26.04■■□□□ 1.76
USP35-202ENST00000528910 SETD5Q9C0A6 1442 aa26.03■■□□□ 1.76
USP35-202ENST00000528910 KIF1BO60333 1816 aa26.02■■□□□ 1.76
USP35-202ENST00000528910 TXNDC2Q86VQ3 553 aa26.02■■□□□ 1.76
USP35-202ENST00000528910 EID1Q9Y6B2 187 aa26.01■■□□□ 1.75
USP35-202ENST00000528910 TRIM52Q96A61 297 aa26■■□□□ 1.75
USP35-202ENST00000528910 RIMS2Q9UQ26 1411 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms