RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
SIPA1-204ENST00000528699 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
SIPA1-204ENST00000528699 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
SIPA1-204ENST00000528699 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
SIPA1-204ENST00000528699 SHANK2Q9UPX8 1470 aa16.92■□□□□ 0.3
SIPA1-204ENST00000528699 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
SIPA1-204ENST00000528699 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
SIPA1-204ENST00000528699 APLP2Q06481 763 aa16.9■□□□□ 0.3
SIPA1-204ENST00000528699 PZPP20742 1482 aa16.9■□□□□ 0.3
SIPA1-204ENST00000528699 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
SIPA1-204ENST00000528699 FGD6Q6ZV73 1430 aa16.89■□□□□ 0.29
SIPA1-204ENST00000528699 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
SIPA1-204ENST00000528699 MROH1Q8NDA8 1641 aa16.88■□□□□ 0.29
SIPA1-204ENST00000528699 DNMT1P26358 1616 aaKnown RBP16.88■□□□□ 0.29
SIPA1-204ENST00000528699 ZC3H13Q5T200 1668 aaKnown RBP16.88■□□□□ 0.29
SIPA1-204ENST00000528699 ABCC5O15440 1437 aa16.87■□□□□ 0.29
SIPA1-204ENST00000528699 DUOX2Q9NRD8 1548 aa16.87■□□□□ 0.29
SIPA1-204ENST00000528699 CERKQ8TCT0 537 aa16.87■□□□□ 0.29
SIPA1-204ENST00000528699 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
SIPA1-204ENST00000528699 ABCC3O15438 1527 aa16.86■□□□□ 0.29
SIPA1-204ENST00000528699 WASHC2CQ9Y4E1 1318 aa16.86■□□□□ 0.29
SIPA1-204ENST00000528699 DAPK1P53355 1430 aa16.85■□□□□ 0.29
SIPA1-204ENST00000528699 TNRQ92752 1358 aa16.84■□□□□ 0.29
SIPA1-204ENST00000528699 FBXO31Q5XUX0 539 aaPredicted RBP16.83■□□□□ 0.28
SIPA1-204ENST00000528699 LTBP4Q8N2S1 1624 aa16.83■□□□□ 0.28
SIPA1-204ENST00000528699 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
SIPA1-204ENST00000528699 ERBINQ96RT1 1412 aa16.82■□□□□ 0.28
SIPA1-204ENST00000528699 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
SIPA1-204ENST00000528699 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
SIPA1-204ENST00000528699 DEPDC5O75140 1603 aa16.8■□□□□ 0.28
SIPA1-204ENST00000528699 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
SIPA1-204ENST00000528699 CEP152O94986 1710 aa16.79■□□□□ 0.28
SIPA1-204ENST00000528699 NCKAP5LQ9HCH0 1330 aa16.79■□□□□ 0.28
SIPA1-204ENST00000528699 PKD2Q13563 968 aa16.79■□□□□ 0.28
SIPA1-204ENST00000528699 POLR1AO95602 1720 aaPredicted RBP16.77■□□□□ 0.28
SIPA1-204ENST00000528699 ERVK-7P63135 1459 aa16.77■□□□□ 0.28
SIPA1-204ENST00000528699 NEURL4Q96JN8 1562 aa16.77■□□□□ 0.27
SIPA1-204ENST00000528699 ADGRL2O95490 1459 aa16.76■□□□□ 0.27
SIPA1-204ENST00000528699 IQSEC2Q5JU85 1478 aa16.76■□□□□ 0.27
SIPA1-204ENST00000528699 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
SIPA1-204ENST00000528699 UGGT1Q9NYU2 1555 aa16.75■□□□□ 0.27
SIPA1-204ENST00000528699 ANKRD30AQ9BXX3 1397 aa16.75■□□□□ 0.27
SIPA1-204ENST00000528699 ARHGAP31Q2M1Z3 1444 aa16.74■□□□□ 0.27
SIPA1-204ENST00000528699 VWDEQ8N2E2 1590 aa16.73■□□□□ 0.27
SIPA1-204ENST00000528699 ZNF335Q9H4Z2 1342 aaPredicted RBP16.71■□□□□ 0.27
SIPA1-204ENST00000528699 LMTK2Q8IWU2 1503 aa16.71■□□□□ 0.27
SIPA1-204ENST00000528699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.71■□□□□ 0.27
SIPA1-204ENST00000528699 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
SIPA1-204ENST00000528699 MED14O60244 1454 aa16.69■□□□□ 0.26
SIPA1-204ENST00000528699 UBR1Q8IWV7 1749 aa16.68■□□□□ 0.26
SIPA1-204ENST00000528699 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
SIPA1-204ENST00000528699 FAM50AQ14320 339 aaKnown RBP16.67■□□□□ 0.26
SIPA1-204ENST00000528699 KANK1Q14678 1352 aa16.66■□□□□ 0.26
SIPA1-204ENST00000528699 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
SIPA1-204ENST00000528699 CFAP65Q6ZU64 1925 aaKnown RBP16.65■□□□□ 0.26
SIPA1-204ENST00000528699 NPHP4O75161 1426 aaPredicted RBP16.65■□□□□ 0.26
SIPA1-204ENST00000528699 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
SIPA1-204ENST00000528699 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
SIPA1-204ENST00000528699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
SIPA1-204ENST00000528699 IQGAP1P46940 1657 aa16.64■□□□□ 0.25
SIPA1-204ENST00000528699 ARHGAP23Q9P227 1491 aa16.63■□□□□ 0.25
SIPA1-204ENST00000528699 PIK3C2BO00750 1634 aa16.63■□□□□ 0.25
SIPA1-204ENST00000528699 SLIT1O75093 1534 aa16.62■□□□□ 0.25
SIPA1-204ENST00000528699 CPS1P31327 1500 aa16.62■□□□□ 0.25
SIPA1-204ENST00000528699 SYNMO15061 1565 aa16.62■□□□□ 0.25
SIPA1-204ENST00000528699 KDM5AP29375 1690 aaKnown RBP16.61■□□□□ 0.25
SIPA1-204ENST00000528699 UNC13BO14795 1591 aa16.6■□□□□ 0.25
SIPA1-204ENST00000528699 ROCK1Q13464 1354 aa16.6■□□□□ 0.25
SIPA1-204ENST00000528699 NOS1P29475 1434 aa16.6■□□□□ 0.25
SIPA1-204ENST00000528699 SCAF11Q99590 1463 aaKnown RBP16.59■□□□□ 0.25
SIPA1-204ENST00000528699 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.24
SIPA1-204ENST00000528699 TET3O43151 1660 aa16.58■□□□□ 0.24
SIPA1-204ENST00000528699 STRCP1A6NGW2 1772 aa16.55■□□□□ 0.24
SIPA1-204ENST00000528699 GCC2Q8IWJ2 1684 aa16.55■□□□□ 0.24
SIPA1-204ENST00000528699 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
SIPA1-204ENST00000528699 TMEM2Q9UHN6 1383 aa16.54■□□□□ 0.24
SIPA1-204ENST00000528699 LTKP29376 864 aa16.54■□□□□ 0.24
SIPA1-204ENST00000528699 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
SIPA1-204ENST00000528699 IDI1Q13907 227 aa16.53■□□□□ 0.24
SIPA1-204ENST00000528699 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.24
SIPA1-204ENST00000528699 PPARGC1BQ86YN6 1023 aaKnown RBP16.52■□□□□ 0.24
SIPA1-204ENST00000528699 RRBP1Q9P2E9 1410 aaKnown RBP16.51■□□□□ 0.23
SIPA1-204ENST00000528699 ALKQ9UM73 1620 aa16.5■□□□□ 0.23
SIPA1-204ENST00000528699 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
SIPA1-204ENST00000528699 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
SIPA1-204ENST00000528699 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
SIPA1-204ENST00000528699 E9PCH4 1651 aa16.5■□□□□ 0.23
SIPA1-204ENST00000528699 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
SIPA1-204ENST00000528699 EID1Q9Y6B2 187 aa16.48■□□□□ 0.23
SIPA1-204ENST00000528699 TMEM131LA2VDJ0 1609 aa16.46■□□□□ 0.23
SIPA1-204ENST00000528699 ITGAEP38570 1179 aa16.46■□□□□ 0.23
SIPA1-204ENST00000528699 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
SIPA1-204ENST00000528699 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
SIPA1-204ENST00000528699 NUP155O75694 1391 aa16.44■□□□□ 0.22
SIPA1-204ENST00000528699 TOM1O60784 492 aa16.43■□□□□ 0.22
SIPA1-204ENST00000528699 XIRP1Q702N8 1843 aaKnown RBP16.42■□□□□ 0.22
SIPA1-204ENST00000528699 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
SIPA1-204ENST00000528699 RIMS2Q9UQ26 1411 aa16.4■□□□□ 0.22
SIPA1-204ENST00000528699 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
SIPA1-204ENST00000528699 NAIPQ13075 1403 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms