RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 SHANK2Q9UPX8 1470 aa35.97■■■■□ 3.35
PKP3-206ENST00000528036 STRCQ7RTU9 1775 aa35.94■■■■□ 3.34
PKP3-206ENST00000528036 PTPN23Q9H3S7 1636 aa35.94■■■■□ 3.34
PKP3-206ENST00000528036 TCOF1Q13428 1488 aaKnown RBP35.93■■■■□ 3.34
PKP3-206ENST00000528036 CERKQ8TCT0 537 aa35.93■■■■□ 3.34
PKP3-206ENST00000528036 PZPP20742 1482 aa35.92■■■■□ 3.34
PKP3-206ENST00000528036 DUOX2Q9NRD8 1548 aa35.92■■■■□ 3.34
PKP3-206ENST00000528036 ABCC5O15440 1437 aa35.91■■■■□ 3.34
PKP3-206ENST00000528036 PKD2Q13563 968 aa35.91■■■■□ 3.34
PKP3-206ENST00000528036 EIF2AK4Q9P2K8 1649 aaKnown RBP35.9■■■■□ 3.34
PKP3-206ENST00000528036 PLA2R1Q13018 1463 aa35.88■■■■□ 3.33
PKP3-206ENST00000528036 TNRQ92752 1358 aa35.88■■■■□ 3.33
PKP3-206ENST00000528036 CAMSAP1Q5T5Y3 1602 aa35.87■■■■□ 3.33
PKP3-206ENST00000528036 MYO3AQ8NEV4 1616 aa35.87■■■■□ 3.33
PKP3-206ENST00000528036 RNF17Q9BXT8 1623 aaKnown RBP35.87■■■■□ 3.33
PKP3-206ENST00000528036 ZNF142P52746 1687 aaPredicted RBP35.87■■■■□ 3.33
PKP3-206ENST00000528036 KIF15Q9NS87 1388 aa35.87■■■■□ 3.33
PKP3-206ENST00000528036 CEP170BQ9Y4F5 1589 aaPredicted RBP35.86■■■■□ 3.33
PKP3-206ENST00000528036 DAPK1P53355 1430 aa35.86■■■■□ 3.33
PKP3-206ENST00000528036 A2ML1A8K2U0 1454 aa35.86■■■■□ 3.33
PKP3-206ENST00000528036 ERBINQ96RT1 1412 aa35.83■■■■□ 3.33
PKP3-206ENST00000528036 FBXO31Q5XUX0 539 aaPredicted RBP35.82■■■■□ 3.32
PKP3-206ENST00000528036 ANKRD30AQ9BXX3 1397 aa35.81■■■■□ 3.32
PKP3-206ENST00000528036 DNMT1P26358 1616 aaKnown RBP35.8■■■■□ 3.32
PKP3-206ENST00000528036 RRP7BPQ9NSQ0 103 aa35.8■■■■□ 3.32
PKP3-206ENST00000528036 ZC3H13Q5T200 1668 aaKnown RBP35.79■■■■□ 3.32
PKP3-206ENST00000528036 CROCC2H7BZ55 1655 aa35.78■■■■□ 3.32
PKP3-206ENST00000528036 NLRP1Q9C000 1473 aa35.77■■■■□ 3.32
PKP3-206ENST00000528036 ABCC3O15438 1527 aa35.77■■■■□ 3.32
PKP3-206ENST00000528036 NCKAP5LQ9HCH0 1330 aa35.75■■■■□ 3.31
PKP3-206ENST00000528036 THEMISQ8N1K5 641 aaPredicted RBP35.74■■■■□ 3.31
PKP3-206ENST00000528036 FAM50AQ14320 339 aaKnown RBP35.71■■■■□ 3.31
PKP3-206ENST00000528036 KANK1Q14678 1352 aa35.7■■■■□ 3.31
PKP3-206ENST00000528036 CHIC2Q9UKJ5 165 aa35.68■■■■□ 3.3
PKP3-206ENST00000528036 MROH1Q8NDA8 1641 aa35.67■■■■□ 3.3
PKP3-206ENST00000528036 ARHGAP31Q2M1Z3 1444 aa35.66■■■■□ 3.3
PKP3-206ENST00000528036 PRDM15P57071 1507 aaPredicted RBP35.65■■■■□ 3.3
PKP3-206ENST00000528036 SPATA31D1Q6ZQQ2 1576 aa35.64■■■■□ 3.3
PKP3-206ENST00000528036 ANKLE2Q86XL3 938 aa35.64■■■■□ 3.3
PKP3-206ENST00000528036 ADGRL2O95490 1459 aa35.64■■■■□ 3.3
PKP3-206ENST00000528036 ERVK-7P63135 1459 aa35.61■■■■□ 3.29
PKP3-206ENST00000528036 IQSEC2Q5JU85 1478 aa35.61■■■■□ 3.29
PKP3-206ENST00000528036 UGGT1Q9NYU2 1555 aa35.6■■■■□ 3.29
PKP3-206ENST00000528036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.6■■■■□ 3.29
PKP3-206ENST00000528036 LTBP4Q8N2S1 1624 aa35.58■■■■□ 3.29
PKP3-206ENST00000528036 DEPDC5O75140 1603 aa35.55■■■■□ 3.28
PKP3-206ENST00000528036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.54■■■■□ 3.282e-6■■■■■ 28.3
PKP3-206ENST00000528036 CEP152O94986 1710 aa35.51■■■■□ 3.27
PKP3-206ENST00000528036 LMTK2Q8IWU2 1503 aa35.51■■■■□ 3.27
PKP3-206ENST00000528036 ANKRD50Q9ULJ7 1429 aa35.5■■■■□ 3.27
PKP3-206ENST00000528036 ZNF335Q9H4Z2 1342 aaPredicted RBP35.5■■■■□ 3.27
PKP3-206ENST00000528036 ROCK1Q13464 1354 aa35.46■■■■□ 3.27
PKP3-206ENST00000528036 MED14O60244 1454 aa35.46■■■■□ 3.27
PKP3-206ENST00000528036 VWDEQ8N2E2 1590 aa35.45■■■■□ 3.27
PKP3-206ENST00000528036 POLR1AO95602 1720 aaPredicted RBP35.44■■■■□ 3.26
PKP3-206ENST00000528036 NPHP4O75161 1426 aaPredicted RBP35.41■■■■□ 3.26
PKP3-206ENST00000528036 NEURL4Q96JN8 1562 aa35.41■■■■□ 3.26
PKP3-206ENST00000528036 STAG3Q9UJ98 1225 aa35.35■■■■□ 3.25
PKP3-206ENST00000528036 EID1Q9Y6B2 187 aa35.35■■■■□ 3.25
PKP3-206ENST00000528036 CPS1P31327 1500 aa35.34■■■■□ 3.25
PKP3-206ENST00000528036 SLC52A1Q9NWF4 448 aa35.34■■■■□ 3.25
PKP3-206ENST00000528036 RPRD2Q5VT52 1461 aaKnown RBP35.34■■■■□ 3.25
PKP3-206ENST00000528036 EFCAB6Q5THR3 1501 aa35.32■■■■□ 3.25
PKP3-206ENST00000528036 CFAP65Q6ZU64 1925 aaKnown RBP35.32■■■■□ 3.24
PKP3-206ENST00000528036 UBR1Q8IWV7 1749 aa35.3■■■■□ 3.24
PKP3-206ENST00000528036 SLIT1O75093 1534 aa35.3■■■■□ 3.24
PKP3-206ENST00000528036 NOS1P29475 1434 aa35.3■■■■□ 3.24
PKP3-206ENST00000528036 SCAF11Q99590 1463 aaKnown RBP35.29■■■■□ 3.24
PKP3-206ENST00000528036 ARHGAP23Q9P227 1491 aa35.29■■■■□ 3.24
PKP3-206ENST00000528036 TXNDC2Q86VQ3 553 aa35.29■■■■□ 3.24
PKP3-206ENST00000528036 IDI1Q13907 227 aa35.28■■■■□ 3.24
PKP3-206ENST00000528036 PPARGC1BQ86YN6 1023 aaKnown RBP35.26■■■■□ 3.24
PKP3-206ENST00000528036 IQGAP1P46940 1657 aa35.25■■■■□ 3.23
PKP3-206ENST00000528036 UBAP1LF5GYI3 381 aa35.25■■■■□ 3.23
PKP3-206ENST00000528036 TMEM2Q9UHN6 1383 aa35.25■■■■□ 3.23
PKP3-206ENST00000528036 KDM5AP29375 1690 aaKnown RBP35.24■■■■□ 3.23
PKP3-206ENST00000528036 ITGAEP38570 1179 aa35.22■■■■□ 3.23
PKP3-206ENST00000528036 LTKP29376 864 aa35.21■■■■□ 3.23
PKP3-206ENST00000528036 UNC13BO14795 1591 aa35.2■■■■□ 3.23
PKP3-206ENST00000528036 PIK3C2BO00750 1634 aa35.19■■■■□ 3.22
PKP3-206ENST00000528036 TET3O43151 1660 aa35.18■■■■□ 3.22
PKP3-206ENST00000528036 RRBP1Q9P2E9 1410 aaKnown RBP35.18■■■■□ 3.22
PKP3-206ENST00000528036 TOM1O60784 492 aa35.18■■■■□ 3.22
PKP3-206ENST00000528036 SYNMO15061 1565 aa35.16■■■■□ 3.22
PKP3-206ENST00000528036 HDGFP51858 240 aaKnown RBP35.15■■■■□ 3.22
PKP3-206ENST00000528036 NUP155O75694 1391 aa35.13■■■■□ 3.21
PKP3-206ENST00000528036 ADGRB3O60242 1522 aa35.11■■■■□ 3.21
PKP3-206ENST00000528036 GCC2Q8IWJ2 1684 aa35.09■■■■□ 3.21
PKP3-206ENST00000528036 IQGAP3Q86VI3 1631 aa35.06■■■■□ 3.2
PKP3-206ENST00000528036 ABCF1Q8NE71 845 aaKnown RBP eCLIP35■■■■□ 3.19
PKP3-206ENST00000528036 LRRC7Q96NW7 1537 aa35■■■■□ 3.19
PKP3-206ENST00000528036 KCNA6P17658 529 aa34.95■■■■□ 3.19
PKP3-206ENST00000528036 E9PCH4 1651 aa34.95■■■■□ 3.18
PKP3-206ENST00000528036 PPP1R15AO75807 674 aaPredicted RBP34.94■■■■□ 3.18
PKP3-206ENST00000528036 BCANQ96GW7 911 aa34.94■■■■□ 3.18
PKP3-206ENST00000528036 SCAF1Q9H7N4 1312 aaKnown RBP34.94■■■■□ 3.18
PKP3-206ENST00000528036 CHGAP10645 457 aaKnown RBP34.93■■■■□ 3.18
PKP3-206ENST00000528036 ZFYVE9O95405 1425 aa34.92■■■■□ 3.18
PKP3-206ENST00000528036 RIMS2Q9UQ26 1411 aa34.92■■■■□ 3.18
PKP3-206ENST00000528036 PLEKHG1Q9ULL1 1385 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms