RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 ZNF644Q9H582 1327 aaPredicted RBP20.36■□□□□ 0.85
CCDC90B-205ENST00000525916 MBD5Q9P267 1494 aa20.36■□□□□ 0.85
CCDC90B-205ENST00000525916 SHANK2Q9UPX8 1470 aa20.36■□□□□ 0.85
CCDC90B-205ENST00000525916 TNRQ92752 1358 aa20.34■□□□□ 0.85
CCDC90B-205ENST00000525916 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
CCDC90B-205ENST00000525916 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
CCDC90B-205ENST00000525916 PZPP20742 1482 aa20.33■□□□□ 0.85
CCDC90B-205ENST00000525916 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
CCDC90B-205ENST00000525916 ALKQ9UM73 1620 aa20.32■□□□□ 0.84
CCDC90B-205ENST00000525916 FBXO31Q5XUX0 539 aaPredicted RBP20.32■□□□□ 0.84
CCDC90B-205ENST00000525916 RTEL1-TNFRSF6BF6WH68 1400 aa20.32■□□□□ 0.84
CCDC90B-205ENST00000525916 DHX29Q7Z478 1369 aaKnown RBP20.32■□□□□ 0.84
CCDC90B-205ENST00000525916 STRCP1A6NGW2 1772 aa20.31■□□□□ 0.84
CCDC90B-205ENST00000525916 TOM1O60784 492 aa20.31■□□□□ 0.84
CCDC90B-205ENST00000525916 FAM135AQ9P2D6 1515 aa20.31■□□□□ 0.84
CCDC90B-205ENST00000525916 DEPDC5O75140 1603 aa20.31■□□□□ 0.84
CCDC90B-205ENST00000525916 IQGAP1P46940 1657 aa20.29■□□□□ 0.84
CCDC90B-205ENST00000525916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC90B-205ENST00000525916 UGGT1Q9NYU2 1555 aa20.27■□□□□ 0.84
CCDC90B-205ENST00000525916 KIF3BO15066 747 aa20.27■□□□□ 0.84
CCDC90B-205ENST00000525916 CCDC141Q6ZP82 1450 aa20.26■□□□□ 0.83
CCDC90B-205ENST00000525916 NPHP4O75161 1426 aaPredicted RBP20.25■□□□□ 0.83
CCDC90B-205ENST00000525916 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
CCDC90B-205ENST00000525916 CFAP65Q6ZU64 1925 aaKnown RBP20.25■□□□□ 0.83
CCDC90B-205ENST00000525916 MED14O60244 1454 aa20.24■□□□□ 0.83
CCDC90B-205ENST00000525916 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
CCDC90B-205ENST00000525916 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
CCDC90B-205ENST00000525916 ANKLE2Q86XL3 938 aa20.24■□□□□ 0.83
CCDC90B-205ENST00000525916 RNF17Q9BXT8 1623 aaKnown RBP20.23■□□□□ 0.83
CCDC90B-205ENST00000525916 SYNMO15061 1565 aa20.22■□□□□ 0.83
CCDC90B-205ENST00000525916 MIA2Q96PC5 1412 aa20.22■□□□□ 0.83
CCDC90B-205ENST00000525916 WASHC2CQ9Y4E1 1318 aa20.22■□□□□ 0.83
CCDC90B-205ENST00000525916 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
CCDC90B-205ENST00000525916 ZC3H13Q5T200 1668 aaKnown RBP20.2■□□□□ 0.82
CCDC90B-205ENST00000525916 THEMISQ8N1K5 641 aaPredicted RBP20.2■□□□□ 0.82
CCDC90B-205ENST00000525916 CEP152O94986 1710 aa20.19■□□□□ 0.82
CCDC90B-205ENST00000525916 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
CCDC90B-205ENST00000525916 LRRC7Q96NW7 1537 aa20.17■□□□□ 0.82
CCDC90B-205ENST00000525916 ARHGEF5Q12774 1597 aa20.17■□□□□ 0.82
CCDC90B-205ENST00000525916 NCOA2Q15596 1464 aa20.17■□□□□ 0.82
CCDC90B-205ENST00000525916 UBR1Q8IWV7 1749 aa20.16■□□□□ 0.82
CCDC90B-205ENST00000525916 XIRP1Q702N8 1843 aaKnown RBP20.16■□□□□ 0.82
CCDC90B-205ENST00000525916 ABCC3O15438 1527 aa20.15■□□□□ 0.82
CCDC90B-205ENST00000525916 EIF2AK4Q9P2K8 1649 aaKnown RBP20.13■□□□□ 0.81
CCDC90B-205ENST00000525916 MROH1Q8NDA8 1641 aa20.12■□□□□ 0.81
CCDC90B-205ENST00000525916 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
CCDC90B-205ENST00000525916 MAST1Q9Y2H9 1570 aa20.1■□□□□ 0.81
CCDC90B-205ENST00000525916 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
CCDC90B-205ENST00000525916 TSPY4P0CV99 314 aa20.06■□□□□ 0.8
CCDC90B-205ENST00000525916 TSPY10P0CW01 314 aa20.06■□□□□ 0.8
CCDC90B-205ENST00000525916 SCAF11Q99590 1463 aaKnown RBP20.05■□□□□ 0.8
CCDC90B-205ENST00000525916 RGS17Q9UGC6 210 aaPredicted RBP20.02■□□□□ 0.8
CCDC90B-205ENST00000525916 SLIT1O75093 1534 aa20.02■□□□□ 0.79
CCDC90B-205ENST00000525916 ARHGAP23Q9P227 1491 aa20.01■□□□□ 0.79
CCDC90B-205ENST00000525916 PIK3C2BO00750 1634 aa20■□□□□ 0.79
CCDC90B-205ENST00000525916 LTKP29376 864 aa19.98■□□□□ 0.79
CCDC90B-205ENST00000525916 PRDM15P57071 1507 aaPredicted RBP19.97■□□□□ 0.79
CCDC90B-205ENST00000525916 CROCC2H7BZ55 1655 aa19.97■□□□□ 0.79
CCDC90B-205ENST00000525916 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
CCDC90B-205ENST00000525916 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
CCDC90B-205ENST00000525916 ROBO1Q9Y6N7 1651 aa19.96■□□□□ 0.79
CCDC90B-205ENST00000525916 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
CCDC90B-205ENST00000525916 SETD1AO15047 1707 aaKnown RBP19.93■□□□□ 0.78
CCDC90B-205ENST00000525916 KDM5AP29375 1690 aaKnown RBP19.92■□□□□ 0.78
CCDC90B-205ENST00000525916 ARHGAP31Q2M1Z3 1444 aa19.92■□□□□ 0.78
CCDC90B-205ENST00000525916 FAM135BQ49AJ0 1406 aa19.91■□□□□ 0.78
CCDC90B-205ENST00000525916 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
CCDC90B-205ENST00000525916 MYOM3Q5VTT5 1437 aa19.89■□□□□ 0.77
CCDC90B-205ENST00000525916 EID1Q9Y6B2 187 aa19.89■□□□□ 0.77
CCDC90B-205ENST00000525916 TMEM94Q12767 1356 aa19.88■□□□□ 0.77
CCDC90B-205ENST00000525916 POTEAQ6S8J7 498 aa19.88■□□□□ 0.77
CCDC90B-205ENST00000525916 EFCAB6Q5THR3 1501 aa19.87■□□□□ 0.77
CCDC90B-205ENST00000525916 TMEM2Q9UHN6 1383 aa19.87■□□□□ 0.77
CCDC90B-205ENST00000525916 PHLPP1O60346 1717 aa19.87■□□□□ 0.77
CCDC90B-205ENST00000525916 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
CCDC90B-205ENST00000525916 ERBINQ96RT1 1412 aa19.86■□□□□ 0.77
CCDC90B-205ENST00000525916 KIF15Q9NS87 1388 aa19.86■□□□□ 0.77
CCDC90B-205ENST00000525916 TET3O43151 1660 aa19.85■□□□□ 0.77
CCDC90B-205ENST00000525916 MYO5BQ9ULV0 1848 aa19.85■□□□□ 0.77
CCDC90B-205ENST00000525916 NWD1Q149M9 1564 aa19.84■□□□□ 0.77
CCDC90B-205ENST00000525916 KANK4Q5T7N3 995 aaPredicted RBP19.84■□□□□ 0.77
CCDC90B-205ENST00000525916 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.77
CCDC90B-205ENST00000525916 STAG3Q9UJ98 1225 aa19.83■□□□□ 0.77
CCDC90B-205ENST00000525916 PTPN23Q9H3S7 1636 aa19.83■□□□□ 0.76
CCDC90B-205ENST00000525916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCDC90B-205ENST00000525916 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
CCDC90B-205ENST00000525916 ADGRB3O60242 1522 aa19.81■□□□□ 0.76
CCDC90B-205ENST00000525916 NKTRP30414 1462 aaKnown RBP19.8■□□□□ 0.76
CCDC90B-205ENST00000525916 ABCC5O15440 1437 aa19.8■□□□□ 0.76
CCDC90B-205ENST00000525916 KCNA6P17658 529 aa19.8■□□□□ 0.76
CCDC90B-205ENST00000525916 SLC26A8Q96RN1 970 aa19.8■□□□□ 0.76
CCDC90B-205ENST00000525916 CHD2O14647 1828 aaKnown RBP19.8■□□□□ 0.76
CCDC90B-205ENST00000525916 PROSER2Q86WR7 435 aaPredicted RBP19.79■□□□□ 0.76
CCDC90B-205ENST00000525916 LMTK2Q8IWU2 1503 aa19.79■□□□□ 0.76
CCDC90B-205ENST00000525916 KANK1Q14678 1352 aa19.78■□□□□ 0.76
CCDC90B-205ENST00000525916 IDI1Q13907 227 aa19.77■□□□□ 0.76
CCDC90B-205ENST00000525916 DAPK1P53355 1430 aa19.76■□□□□ 0.75
CCDC90B-205ENST00000525916 GCC2Q8IWJ2 1684 aa19.76■□□□□ 0.75
CCDC90B-205ENST00000525916 COL16A1Q07092 1604 aaPredicted RBP19.76■□□□□ 0.75
CCDC90B-205ENST00000525916 MSH6P52701 1360 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms