RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 POLR1AO95602 1720 aaPredicted RBP18.01■□□□□ 0.47
CTTN-209ENST00000525276 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
CTTN-209ENST00000525276 MAP3K1Q13233 1512 aa18■□□□□ 0.47
CTTN-209ENST00000525276 ALKQ9UM73 1620 aa18■□□□□ 0.47
CTTN-209ENST00000525276 DHX29Q7Z478 1369 aaKnown RBP18■□□□□ 0.47
CTTN-209ENST00000525276 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
CTTN-209ENST00000525276 PZPP20742 1482 aa17.98■□□□□ 0.47
CTTN-209ENST00000525276 VWDEQ8N2E2 1590 aa17.97■□□□□ 0.47
CTTN-209ENST00000525276 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
CTTN-209ENST00000525276 APLP2Q06481 763 aa17.97■□□□□ 0.47
CTTN-209ENST00000525276 MED1Q15648 1581 aaPredicted RBP17.96■□□□□ 0.47
CTTN-209ENST00000525276 TNRQ92752 1358 aa17.96■□□□□ 0.47
CTTN-209ENST00000525276 HSPA1LP34931 641 aa17.96■□□□□ 0.47
CTTN-209ENST00000525276 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
CTTN-209ENST00000525276 CPS1P31327 1500 aa17.95■□□□□ 0.46
CTTN-209ENST00000525276 KDM5DQ9BY66 1539 aa17.95■□□□□ 0.46
CTTN-209ENST00000525276 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
CTTN-209ENST00000525276 FAM135AQ9P2D6 1515 aa17.93■□□□□ 0.46
CTTN-209ENST00000525276 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
CTTN-209ENST00000525276 CCDC141Q6ZP82 1450 aa17.92■□□□□ 0.46
CTTN-209ENST00000525276 KIF3BO15066 747 aa17.91■□□□□ 0.46
CTTN-209ENST00000525276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTTN-209ENST00000525276 MED14O60244 1454 aa17.9■□□□□ 0.46
CTTN-209ENST00000525276 CAMSAP2Q08AD1 1489 aa17.9■□□□□ 0.46
CTTN-209ENST00000525276 STRCP1A6NGW2 1772 aa17.9■□□□□ 0.46
CTTN-209ENST00000525276 DEPDC5O75140 1603 aa17.9■□□□□ 0.46
CTTN-209ENST00000525276 MIA2Q96PC5 1412 aa17.89■□□□□ 0.46
CTTN-209ENST00000525276 PIP4K2BP78356 416 aa17.89■□□□□ 0.45
CTTN-209ENST00000525276 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
CTTN-209ENST00000525276 UGGT1Q9NYU2 1555 aa17.87■□□□□ 0.45
CTTN-209ENST00000525276 NPHP4O75161 1426 aaPredicted RBP17.86■□□□□ 0.45
CTTN-209ENST00000525276 ARHGEF5Q12774 1597 aa17.86■□□□□ 0.45
CTTN-209ENST00000525276 TOM1O60784 492 aa17.85■□□□□ 0.45
CTTN-209ENST00000525276 RNF17Q9BXT8 1623 aaKnown RBP17.85■□□□□ 0.45
CTTN-209ENST00000525276 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
CTTN-209ENST00000525276 WASHC2CQ9Y4E1 1318 aa17.85■□□□□ 0.45
CTTN-209ENST00000525276 IQGAP1P46940 1657 aa17.84■□□□□ 0.45
CTTN-209ENST00000525276 ANKLE2Q86XL3 938 aa17.84■□□□□ 0.45
CTTN-209ENST00000525276 ABCC3O15438 1527 aa17.83■□□□□ 0.45
CTTN-209ENST00000525276 MROH1Q8NDA8 1641 aa17.83■□□□□ 0.44
CTTN-209ENST00000525276 THEMISQ8N1K5 641 aaPredicted RBP17.82■□□□□ 0.44
CTTN-209ENST00000525276 LRRC7Q96NW7 1537 aa17.82■□□□□ 0.44
CTTN-209ENST00000525276 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
CTTN-209ENST00000525276 ZC3H13Q5T200 1668 aaKnown RBP17.8■□□□□ 0.44
CTTN-209ENST00000525276 RSPH4AQ5TD94 716 aa17.79■□□□□ 0.44
CTTN-209ENST00000525276 ERVK-7P63135 1459 aa17.79■□□□□ 0.44
CTTN-209ENST00000525276 MAST1Q9Y2H9 1570 aa17.79■□□□□ 0.44
CTTN-209ENST00000525276 UBR1Q8IWV7 1749 aa17.76■□□□□ 0.43
CTTN-209ENST00000525276 SYNMO15061 1565 aa17.76■□□□□ 0.43
CTTN-209ENST00000525276 EIF2AK4Q9P2K8 1649 aaKnown RBP17.75■□□□□ 0.43
CTTN-209ENST00000525276 CEP152O94986 1710 aa17.74■□□□□ 0.43
CTTN-209ENST00000525276 XIRP1Q702N8 1843 aaKnown RBP17.74■□□□□ 0.43
CTTN-209ENST00000525276 ARHGAP23Q9P227 1491 aa17.73■□□□□ 0.43
CTTN-209ENST00000525276 CFAP65Q6ZU64 1925 aaKnown RBP17.72■□□□□ 0.43
CTTN-209ENST00000525276 TSPY4P0CV99 314 aa17.71■□□□□ 0.43
CTTN-209ENST00000525276 TSPY10P0CW01 314 aa17.71■□□□□ 0.43
CTTN-209ENST00000525276 LTKP29376 864 aa17.71■□□□□ 0.43
CTTN-209ENST00000525276 RGS17Q9UGC6 210 aaPredicted RBP17.71■□□□□ 0.43
CTTN-209ENST00000525276 SLIT1O75093 1534 aa17.71■□□□□ 0.43
CTTN-209ENST00000525276 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
CTTN-209ENST00000525276 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
CTTN-209ENST00000525276 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
CTTN-209ENST00000525276 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
CTTN-209ENST00000525276 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
CTTN-209ENST00000525276 PRDM15P57071 1507 aaPredicted RBP17.67■□□□□ 0.42
CTTN-209ENST00000525276 ARHGAP31Q2M1Z3 1444 aa17.65■□□□□ 0.42
CTTN-209ENST00000525276 DUOX2Q9NRD8 1548 aa17.65■□□□□ 0.42
CTTN-209ENST00000525276 PIK3C2BO00750 1634 aa17.63■□□□□ 0.41
CTTN-209ENST00000525276 TXNDC2Q86VQ3 553 aa17.61■□□□□ 0.41
CTTN-209ENST00000525276 PPARGC1BQ86YN6 1023 aaKnown RBP17.61■□□□□ 0.41
CTTN-209ENST00000525276 ABCC5O15440 1437 aa17.6■□□□□ 0.41
CTTN-209ENST00000525276 CROCC2H7BZ55 1655 aa17.6■□□□□ 0.41
CTTN-209ENST00000525276 DAPK1P53355 1430 aa17.59■□□□□ 0.41
CTTN-209ENST00000525276 FAM135BQ49AJ0 1406 aa17.59■□□□□ 0.41
CTTN-209ENST00000525276 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
CTTN-209ENST00000525276 TMEM2Q9UHN6 1383 aa17.59■□□□□ 0.41
CTTN-209ENST00000525276 FAM50AQ14320 339 aaKnown RBP17.59■□□□□ 0.41
CTTN-209ENST00000525276 TET3O43151 1660 aa17.58■□□□□ 0.41
CTTN-209ENST00000525276 ERBINQ96RT1 1412 aa17.58■□□□□ 0.41
CTTN-209ENST00000525276 KDM5AP29375 1690 aaKnown RBP17.57■□□□□ 0.4
CTTN-209ENST00000525276 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
CTTN-209ENST00000525276 LMTK2Q8IWU2 1503 aa17.54■□□□□ 0.4
CTTN-209ENST00000525276 POTEAQ6S8J7 498 aa17.54■□□□□ 0.4
CTTN-209ENST00000525276 ROBO1Q9Y6N7 1651 aa17.54■□□□□ 0.4
CTTN-209ENST00000525276 SRCAPQ6ZRS2 3230 aa17.53■□□□□ 0.4
CTTN-209ENST00000525276 EFCAB6Q5THR3 1501 aa17.53■□□□□ 0.4
CTTN-209ENST00000525276 RRP7BPQ9NSQ0 103 aa17.53■□□□□ 0.4
CTTN-209ENST00000525276 IDI1Q13907 227 aa17.52■□□□□ 0.4
CTTN-209ENST00000525276 NWD1Q149M9 1564 aa17.52■□□□□ 0.39
CTTN-209ENST00000525276 NOS1P29475 1434 aa17.51■□□□□ 0.39
CTTN-209ENST00000525276 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
CTTN-209ENST00000525276 EID1Q9Y6B2 187 aa17.51■□□□□ 0.39
CTTN-209ENST00000525276 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
CTTN-209ENST00000525276 KCNA6P17658 529 aa17.5■□□□□ 0.39
CTTN-209ENST00000525276 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
CTTN-209ENST00000525276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.393e-11■■■■□ 19.6
CTTN-209ENST00000525276 ADGRB3O60242 1522 aa17.48■□□□□ 0.39
CTTN-209ENST00000525276 SLC26A8Q96RN1 970 aa17.48■□□□□ 0.39
CTTN-209ENST00000525276 ADGRL2O95490 1459 aa17.47■□□□□ 0.39
CTTN-209ENST00000525276 NKTRP30414 1462 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms