RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 FBXO31Q5XUX0 539 aaPredicted RBP12.81□□□□□ -0.36
NSMCE2-213ENST00000523824 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
NSMCE2-213ENST00000523824 KIF3BO15066 747 aa12.8□□□□□ -0.36
NSMCE2-213ENST00000523824 HSPA1LP34931 641 aa12.8□□□□□ -0.36
NSMCE2-213ENST00000523824 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
NSMCE2-213ENST00000523824 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
NSMCE2-213ENST00000523824 TNRQ92752 1358 aa12.79□□□□□ -0.36
NSMCE2-213ENST00000523824 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
NSMCE2-213ENST00000523824 MBD5Q9P267 1494 aa12.78□□□□□ -0.36
NSMCE2-213ENST00000523824 DNMT1P26358 1616 aaKnown RBP12.78□□□□□ -0.36
NSMCE2-213ENST00000523824 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
NSMCE2-213ENST00000523824 WASHC2CQ9Y4E1 1318 aa12.78□□□□□ -0.36
NSMCE2-213ENST00000523824 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
NSMCE2-213ENST00000523824 CPS1P31327 1500 aa12.76□□□□□ -0.37
NSMCE2-213ENST00000523824 TIAM1Q13009 1591 aa12.75□□□□□ -0.37
NSMCE2-213ENST00000523824 RSPH4AQ5TD94 716 aa12.75□□□□□ -0.37
NSMCE2-213ENST00000523824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.75□□□□□ -0.37
NSMCE2-213ENST00000523824 PZPP20742 1482 aa12.73□□□□□ -0.37
NSMCE2-213ENST00000523824 MIA2Q96PC5 1412 aa12.73□□□□□ -0.37
NSMCE2-213ENST00000523824 EHBP1L1Q8N3D4 1523 aa12.72□□□□□ -0.37
NSMCE2-213ENST00000523824 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
NSMCE2-213ENST00000523824 CEP162Q5TB80 1403 aa12.72□□□□□ -0.37
NSMCE2-213ENST00000523824 TSPY4P0CV99 314 aa12.72□□□□□ -0.37
NSMCE2-213ENST00000523824 TSPY10P0CW01 314 aa12.72□□□□□ -0.37
NSMCE2-213ENST00000523824 MED1Q15648 1581 aaPredicted RBP12.72□□□□□ -0.37
NSMCE2-213ENST00000523824 NEURL4Q96JN8 1562 aa12.72□□□□□ -0.37
NSMCE2-213ENST00000523824 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
NSMCE2-213ENST00000523824 FAM135AQ9P2D6 1515 aa12.71□□□□□ -0.38
NSMCE2-213ENST00000523824 NLRP1Q9C000 1473 aa12.71□□□□□ -0.38
NSMCE2-213ENST00000523824 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.38
NSMCE2-213ENST00000523824 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.38
NSMCE2-213ENST00000523824 UGGT1Q9NYU2 1555 aa12.7□□□□□ -0.38
NSMCE2-213ENST00000523824 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
NSMCE2-213ENST00000523824 MED14O60244 1454 aa12.68□□□□□ -0.38
NSMCE2-213ENST00000523824 VWDEQ8N2E2 1590 aa12.68□□□□□ -0.38
NSMCE2-213ENST00000523824 NCOA2Q15596 1464 aa12.67□□□□□ -0.38
NSMCE2-213ENST00000523824 DEPDC5O75140 1603 aa12.65□□□□□ -0.38
NSMCE2-213ENST00000523824 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
NSMCE2-213ENST00000523824 IQGAP1P46940 1657 aa12.62□□□□□ -0.39
NSMCE2-213ENST00000523824 ARHGEF5Q12774 1597 aa12.62□□□□□ -0.39
NSMCE2-213ENST00000523824 ALKQ9UM73 1620 aa12.62□□□□□ -0.39
NSMCE2-213ENST00000523824 TXNDC2Q86VQ3 553 aa12.61□□□□□ -0.39
NSMCE2-213ENST00000523824 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
NSMCE2-213ENST00000523824 ABCC3O15438 1527 aa12.61□□□□□ -0.39
NSMCE2-213ENST00000523824 ERVK-7P63135 1459 aa12.6□□□□□ -0.39
NSMCE2-213ENST00000523824 LTKP29376 864 aa12.59□□□□□ -0.39
NSMCE2-213ENST00000523824 EID1Q9Y6B2 187 aa12.59□□□□□ -0.39
NSMCE2-213ENST00000523824 RNF17Q9BXT8 1623 aaKnown RBP12.59□□□□□ -0.39
NSMCE2-213ENST00000523824 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
NSMCE2-213ENST00000523824 STRCP1A6NGW2 1772 aa12.57□□□□□ -0.4
NSMCE2-213ENST00000523824 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
NSMCE2-213ENST00000523824 SYNMO15061 1565 aa12.56□□□□□ -0.4
NSMCE2-213ENST00000523824 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
NSMCE2-213ENST00000523824 LRRC9Q6ZRR7 1453 aa12.56□□□□□ -0.4
NSMCE2-213ENST00000523824 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
NSMCE2-213ENST00000523824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.4
NSMCE2-213ENST00000523824 RGS17Q9UGC6 210 aaPredicted RBP12.55□□□□□ -0.4
NSMCE2-213ENST00000523824 EIF2AK4Q9P2K8 1649 aaKnown RBP12.55□□□□□ -0.4
NSMCE2-213ENST00000523824 UBR1Q8IWV7 1749 aa12.54□□□□□ -0.4
NSMCE2-213ENST00000523824 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
NSMCE2-213ENST00000523824 KANK4Q5T7N3 995 aaPredicted RBP12.53□□□□□ -0.4
NSMCE2-213ENST00000523824 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
NSMCE2-213ENST00000523824 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
NSMCE2-213ENST00000523824 SLIT1O75093 1534 aa12.52□□□□□ -0.4
NSMCE2-213ENST00000523824 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.4
NSMCE2-213ENST00000523824 MROH1Q8NDA8 1641 aa12.52□□□□□ -0.4
NSMCE2-213ENST00000523824 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.41
NSMCE2-213ENST00000523824 ARHGAP31Q2M1Z3 1444 aa12.52□□□□□ -0.41
NSMCE2-213ENST00000523824 CEP152O94986 1710 aa12.51□□□□□ -0.41
NSMCE2-213ENST00000523824 KANK1Q14678 1352 aa12.51□□□□□ -0.41
NSMCE2-213ENST00000523824 KIF15Q9NS87 1388 aa12.51□□□□□ -0.41
NSMCE2-213ENST00000523824 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
NSMCE2-213ENST00000523824 FAM135BQ49AJ0 1406 aa12.51□□□□□ -0.41
NSMCE2-213ENST00000523824 VPS8Q8N3P4 1428 aa12.51□□□□□ -0.41
NSMCE2-213ENST00000523824 KCNA6P17658 529 aa12.5□□□□□ -0.41
NSMCE2-213ENST00000523824 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
NSMCE2-213ENST00000523824 TMEM94Q12767 1356 aa12.49□□□□□ -0.41
NSMCE2-213ENST00000523824 IDI1Q13907 227 aa12.49□□□□□ -0.41
NSMCE2-213ENST00000523824 SLC26A8Q96RN1 970 aa12.49□□□□□ -0.41
NSMCE2-213ENST00000523824 ERBINQ96RT1 1412 aa12.48□□□□□ -0.41
NSMCE2-213ENST00000523824 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
NSMCE2-213ENST00000523824 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
NSMCE2-213ENST00000523824 BCANQ96GW7 911 aa12.48□□□□□ -0.41
NSMCE2-213ENST00000523824 LOC105371045A0A1W2PR82 267 aa12.47□□□□□ -0.41
NSMCE2-213ENST00000523824 PRDM15P57071 1507 aaPredicted RBP12.47□□□□□ -0.41
NSMCE2-213ENST00000523824 ABCC5O15440 1437 aa12.46□□□□□ -0.41
NSMCE2-213ENST00000523824 APLP2Q06481 763 aa12.46□□□□□ -0.41
NSMCE2-213ENST00000523824 PIK3C2BO00750 1634 aa12.46□□□□□ -0.41
NSMCE2-213ENST00000523824 MAP3K1Q13233 1512 aa12.46□□□□□ -0.42
NSMCE2-213ENST00000523824 XIRP1Q702N8 1843 aaKnown RBP12.46□□□□□ -0.42
NSMCE2-213ENST00000523824 CHIC2Q9UKJ5 165 aa12.45□□□□□ -0.42
NSMCE2-213ENST00000523824 EFCAB6Q5THR3 1501 aa12.45□□□□□ -0.42
NSMCE2-213ENST00000523824 SLAIN2Q9P270 581 aa12.43□□□□□ -0.42
NSMCE2-213ENST00000523824 MSH6P52701 1360 aa12.43□□□□□ -0.42
NSMCE2-213ENST00000523824 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
NSMCE2-213ENST00000523824 DAPK1P53355 1430 aa12.42□□□□□ -0.42
NSMCE2-213ENST00000523824 ANKRD30AQ9BXX3 1397 aa12.42□□□□□ -0.42
NSMCE2-213ENST00000523824 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
NSMCE2-213ENST00000523824 HDGFP51858 240 aaKnown RBP12.41□□□□□ -0.42
NSMCE2-213ENST00000523824 TET3O43151 1660 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms