RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 UACAQ9BZF9 1416 aa9.39□□□□□ -0.91
PABPC1-223ENST00000523636 TNIKQ9UKE5 1360 aa9.38□□□□□ -0.91
PABPC1-223ENST00000523636 UBAP1LF5GYI3 381 aa9.38□□□□□ -0.91
PABPC1-223ENST00000523636 SETD1AO15047 1707 aaKnown RBP9.37□□□□□ -0.91
PABPC1-223ENST00000523636 SOX12O15370 315 aa9.37□□□□□ -0.91
PABPC1-223ENST00000523636 FER1L4A9Z1Z3 1794 aa9.37□□□□□ -0.91
PABPC1-223ENST00000523636 RAPGEF3O95398 923 aa9.36□□□□□ -0.91
PABPC1-223ENST00000523636 CABP2Q9NPB3 220 aa9.36□□□□□ -0.91
PABPC1-223ENST00000523636 ARHGEF40Q8TER5 1519 aa9.36□□□□□ -0.91
PABPC1-223ENST00000523636 ARID4BQ4LE39 1312 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-223ENST00000523636 TIE1P35590 1138 aa9.35□□□□□ -0.91
PABPC1-223ENST00000523636 WRNQ14191 1432 aaPredicted RBP eCLIP9.35□□□□□ -0.91
PABPC1-223ENST00000523636 MFRPQ9BY79 579 aa9.35□□□□□ -0.91
PABPC1-223ENST00000523636 KDM2AQ9Y2K7 1162 aa9.35□□□□□ -0.91
PABPC1-223ENST00000523636 EFCAB3Q8N7B9 438 aa9.34□□□□□ -0.91
PABPC1-223ENST00000523636 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
PABPC1-223ENST00000523636 NLRP6P59044 892 aa9.33□□□□□ -0.92
PABPC1-223ENST00000523636 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
PABPC1-223ENST00000523636 DISP1Q96F81 1524 aa9.31□□□□□ -0.92
PABPC1-223ENST00000523636 ALKQ9UM73 1620 aa9.31□□□□□ -0.92
PABPC1-223ENST00000523636 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
PABPC1-223ENST00000523636 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
PABPC1-223ENST00000523636 SETD1BQ9UPS6 1966 aaKnown RBP9.31□□□□□ -0.92
PABPC1-223ENST00000523636 GOLGA2Q08379 1002 aa9.3□□□□□ -0.92
PABPC1-223ENST00000523636 BIVM-ERCC5R4GMW8 1640 aa9.3□□□□□ -0.92
PABPC1-223ENST00000523636 ZNF335Q9H4Z2 1342 aaPredicted RBP9.3□□□□□ -0.92
PABPC1-223ENST00000523636 GALR2O43603 387 aaPredicted RBP9.29□□□□□ -0.92
PABPC1-223ENST00000523636 POTEIP0CG38 1075 aa9.29□□□□□ -0.92
PABPC1-223ENST00000523636 CEBPAP49715 358 aaPredicted RBP9.29□□□□□ -0.92
PABPC1-223ENST00000523636 RICTORQ6R327 1708 aa9.28□□□□□ -0.92
PABPC1-223ENST00000523636 TTLL13PA6NNM8 815 aa9.28□□□□□ -0.92
PABPC1-223ENST00000523636 POTEAQ6S8J7 498 aa9.28□□□□□ -0.92
PABPC1-223ENST00000523636 ARHGEF12Q9NZN5 1544 aa9.27□□□□□ -0.93
PABPC1-223ENST00000523636 MKRN3Q13064 507 aaKnown RBP9.27□□□□□ -0.93
PABPC1-223ENST00000523636 KCNH8Q96L42 1107 aa9.27□□□□□ -0.93
PABPC1-223ENST00000523636 BMP2KQ9NSY1 1161 aaPredicted RBP9.27□□□□□ -0.93
PABPC1-223ENST00000523636 PHF8Q9UPP1 1060 aa9.27□□□□□ -0.93
PABPC1-223ENST00000523636 NCOA1Q15788 1441 aa9.27□□□□□ -0.93
PABPC1-223ENST00000523636 UHRF1BP1Q6BDS2 1440 aa9.25□□□□□ -0.93
PABPC1-223ENST00000523636 CARMIL2Q6F5E8 1435 aa9.25□□□□□ -0.93
PABPC1-223ENST00000523636 FANCAO15360 1455 aa9.24□□□□□ -0.93
PABPC1-223ENST00000523636 PIP4K2BP78356 416 aa9.24□□□□□ -0.93
PABPC1-223ENST00000523636 ABCA9Q8IUA7 1624 aa9.23□□□□□ -0.93
PABPC1-223ENST00000523636 MLECQ14165 292 aa9.22□□□□□ -0.93
PABPC1-223ENST00000523636 BCANQ96GW7 911 aa9.22□□□□□ -0.93
PABPC1-223ENST00000523636 PHLDB1Q86UU1 1377 aa9.22□□□□□ -0.93
PABPC1-223ENST00000523636 ASTLQ6HA08 431 aaPredicted RBP9.21□□□□□ -0.94
PABPC1-223ENST00000523636 MS4A4AQ96JQ5 239 aa9.21□□□□□ -0.94
PABPC1-223ENST00000523636 TRIM35Q9UPQ4 493 aa9.21□□□□□ -0.94
PABPC1-223ENST00000523636 NEO1Q92859 1461 aa9.21□□□□□ -0.94
PABPC1-223ENST00000523636 IQGAP2Q13576 1575 aa9.2□□□□□ -0.94
PABPC1-223ENST00000523636 PPP1R37O75864 691 aa9.2□□□□□ -0.94
PABPC1-223ENST00000523636 UPF1Q92900 1129 aaKnown RBP eCLIP9.2□□□□□ -0.94
PABPC1-223ENST00000523636 POGZQ7Z3K3 1410 aa9.2□□□□□ -0.94
PABPC1-223ENST00000523636 C3P01024 1663 aa9.2□□□□□ -0.94
PABPC1-223ENST00000523636 ATMINO43313 823 aaPredicted RBP9.19□□□□□ -0.94
PABPC1-223ENST00000523636 DCBLD2Q96PD2 775 aa9.19□□□□□ -0.94
PABPC1-223ENST00000523636 KIAA0556O60303 1618 aa9.18□□□□□ -0.94
PABPC1-223ENST00000523636 ATN1P54259 1190 aaPredicted RBP9.18□□□□□ -0.94
PABPC1-223ENST00000523636 FHOD3Q2V2M9 1422 aa9.18□□□□□ -0.94
PABPC1-223ENST00000523636 CAMSAP1Q5T5Y3 1602 aa9.18□□□□□ -0.94
PABPC1-223ENST00000523636 IER5LQ5T953 404 aa9.18□□□□□ -0.94
PABPC1-223ENST00000523636 ZMYM4Q5VZL5 1548 aa9.18□□□□□ -0.94
PABPC1-223ENST00000523636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.18□□□□□ -0.94
PABPC1-223ENST00000523636 ABCA8O94911 1581 aa9.17□□□□□ -0.94
PABPC1-223ENST00000523636 AKNAQ7Z591 1439 aa9.17□□□□□ -0.94
PABPC1-223ENST00000523636 IGF1RP08069 1367 aa9.17□□□□□ -0.94
PABPC1-223ENST00000523636 CADPS2Q86UW7 1296 aa9.16□□□□□ -0.94
PABPC1-223ENST00000523636 ZFYVE16Q7Z3T8 1539 aa9.15□□□□□ -0.94
PABPC1-223ENST00000523636 NCKAP5LQ9HCH0 1330 aa9.15□□□□□ -0.94
PABPC1-223ENST00000523636 UGGT2Q9NYU1 1516 aa9.15□□□□□ -0.95
PABPC1-223ENST00000523636 WDR70Q9NW82 654 aa9.13□□□□□ -0.95
PABPC1-223ENST00000523636 EFCAB5A4FU69 1503 aa9.12□□□□□ -0.95
PABPC1-223ENST00000523636 IRX5P78411 483 aaPredicted RBP9.12□□□□□ -0.95
PABPC1-223ENST00000523636 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
PABPC1-223ENST00000523636 DENND4BO75064 1496 aaPredicted RBP9.12□□□□□ -0.95
PABPC1-223ENST00000523636 HECW1Q76N89 1606 aa9.12□□□□□ -0.95
PABPC1-223ENST00000523636 TOM1O60784 492 aa9.11□□□□□ -0.95
PABPC1-223ENST00000523636 P3H3Q8IVL6 736 aa9.11□□□□□ -0.95
PABPC1-223ENST00000523636 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
PABPC1-223ENST00000523636 TCOF1Q13428 1488 aaKnown RBP9.1□□□□□ -0.95
PABPC1-223ENST00000523636 PDCD7Q8N8D1 485 aaKnown RBP9.1□□□□□ -0.95
PABPC1-223ENST00000523636 EP400Q96L91 3159 aa9.09□□□□□ -0.95
PABPC1-223ENST00000523636 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
PABPC1-223ENST00000523636 PDE4AP27815 886 aa9.08□□□□□ -0.96
PABPC1-223ENST00000523636 TRAPPC8Q9Y2L5 1435 aa9.07□□□□□ -0.96
PABPC1-223ENST00000523636 LHX8Q68G74 356 aa9.07□□□□□ -0.96
PABPC1-223ENST00000523636 CRISPLD2Q9H0B8 497 aa9.07□□□□□ -0.96
PABPC1-223ENST00000523636 ATP10BO94823 1461 aa9.07□□□□□ -0.96
PABPC1-223ENST00000523636 MAGI2Q86UL8 1455 aa9.07□□□□□ -0.96
PABPC1-223ENST00000523636 SETBP1Q9Y6X0 1596 aa9.07□□□□□ -0.96
PABPC1-223ENST00000523636 PLCG2P16885 1265 aa9.06□□□□□ -0.96
PABPC1-223ENST00000523636 NBR1Q14596 966 aa9.06□□□□□ -0.96
PABPC1-223ENST00000523636 SLC39A7Q92504 469 aa9.06□□□□□ -0.96
PABPC1-223ENST00000523636 CPS1P31327 1500 aa9.05□□□□□ -0.96
PABPC1-223ENST00000523636 RAPGEF2Q9Y4G8 1499 aa9.05□□□□□ -0.96
PABPC1-223ENST00000523636 MFSD10Q14728 455 aa9.05□□□□□ -0.96
PABPC1-223ENST00000523636 DPY19L2Q6NUT2 758 aa9.05□□□□□ -0.96
PABPC1-223ENST00000523636 CEP350Q5VT06 3117 aa9.05□□□□□ -0.96
PABPC1-223ENST00000523636 ZNF142P52746 1687 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms