RNA–Protein interactions for RNA: ENST00000522749.5

CLK4-212, Transcript of CDC like kinase 4, humanhuman

TSL 3

Gene CLK4, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-212ENST00000522749 TSPY4P0CV99 314 aa9.88□□□□□ -0.83
CLK4-212ENST00000522749 TSPY10P0CW01 314 aa9.88□□□□□ -0.83
CLK4-212ENST00000522749 PTPRKQ15262 1439 aa9.88□□□□□ -0.83
CLK4-212ENST00000522749 UNC13BO14795 1591 aa9.88□□□□□ -0.83
CLK4-212ENST00000522749 MLECQ14165 292 aa9.87□□□□□ -0.83
CLK4-212ENST00000522749 KIF15Q9NS87 1388 aa9.87□□□□□ -0.83
CLK4-212ENST00000522749 KDM5DQ9BY66 1539 aa9.87□□□□□ -0.83
CLK4-212ENST00000522749 ZNF142P52746 1687 aaPredicted RBP9.87□□□□□ -0.83
CLK4-212ENST00000522749 NCOA1Q15788 1441 aa9.86□□□□□ -0.83
CLK4-212ENST00000522749 ERBINQ96RT1 1412 aa9.86□□□□□ -0.83
CLK4-212ENST00000522749 MYO5BQ9ULV0 1848 aa9.85□□□□□ -0.83
CLK4-212ENST00000522749 ANKRD30AQ9BXX3 1397 aa9.85□□□□□ -0.83
CLK4-212ENST00000522749 MYO3AQ8NEV4 1616 aa9.85□□□□□ -0.83
CLK4-212ENST00000522749 VWDEQ8N2E2 1590 aa9.84□□□□□ -0.83
CLK4-212ENST00000522749 ABCC3O15438 1527 aa9.84□□□□□ -0.83
CLK4-212ENST00000522749 TET3O43151 1660 aa9.83□□□□□ -0.84
CLK4-212ENST00000522749 CNTLNQ9NXG0 1405 aa9.83□□□□□ -0.84
CLK4-212ENST00000522749 IQGAP3Q86VI3 1631 aa9.83□□□□□ -0.84
CLK4-212ENST00000522749 CHIC2Q9UKJ5 165 aa9.83□□□□□ -0.84
CLK4-212ENST00000522749 ROCK1Q13464 1354 aa9.83□□□□□ -0.84
CLK4-212ENST00000522749 RRP7BPQ9NSQ0 103 aa9.82□□□□□ -0.84
CLK4-212ENST00000522749 E9PCH4 1651 aa9.82□□□□□ -0.84
CLK4-212ENST00000522749 KIF3BO15066 747 aa9.81□□□□□ -0.84
CLK4-212ENST00000522749 POLR1AO95602 1720 aaPredicted RBP9.8□□□□□ -0.84
CLK4-212ENST00000522749 SPHKAPQ2M3C7 1700 aa9.8□□□□□ -0.84
CLK4-212ENST00000522749 GGT6Q6P531 493 aa9.8□□□□□ -0.84
CLK4-212ENST00000522749 STRCQ7RTU9 1775 aa9.8□□□□□ -0.84
CLK4-212ENST00000522749 ANKRD50Q9ULJ7 1429 aa9.8□□□□□ -0.84
CLK4-212ENST00000522749 EFCAB6Q5THR3 1501 aa9.79□□□□□ -0.84
CLK4-212ENST00000522749 ITGAEP38570 1179 aa9.79□□□□□ -0.84
CLK4-212ENST00000522749 LMTK2Q8IWU2 1503 aa9.78□□□□□ -0.84
CLK4-212ENST00000522749 SPATA31D1Q6ZQQ2 1576 aa9.78□□□□□ -0.84
CLK4-212ENST00000522749 UBR1Q8IWV7 1749 aa9.78□□□□□ -0.84
CLK4-212ENST00000522749 PZPP20742 1482 aa9.78□□□□□ -0.84
CLK4-212ENST00000522749 LMTK3Q96Q04 1460 aa9.78□□□□□ -0.84
CLK4-212ENST00000522749 CEP170BQ9Y4F5 1589 aaPredicted RBP9.77□□□□□ -0.85
CLK4-212ENST00000522749 PPP6R1Q9UPN7 881 aa9.77□□□□□ -0.85
CLK4-212ENST00000522749 ZMYM3Q14202 1370 aa9.76□□□□□ -0.85
CLK4-212ENST00000522749 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
CLK4-212ENST00000522749 NAIPQ13075 1403 aa9.76□□□□□ -0.85
CLK4-212ENST00000522749 NPATQ14207 1427 aa9.76□□□□□ -0.85
CLK4-212ENST00000522749 CEBPAP49715 358 aaPredicted RBP9.76□□□□□ -0.85
CLK4-212ENST00000522749 PLPPR3Q6T4P5 718 aa9.76□□□□□ -0.85
CLK4-212ENST00000522749 ESF1Q9H501 851 aaKnown RBP9.76□□□□□ -0.85
CLK4-212ENST00000522749 KDM5AP29375 1690 aaKnown RBP9.76□□□□□ -0.85
CLK4-212ENST00000522749 SYNMO15061 1565 aa9.75□□□□□ -0.85
CLK4-212ENST00000522749 KIF1BO60333 1816 aa9.75□□□□□ -0.85
CLK4-212ENST00000522749 PIK3C2BO00750 1634 aa9.74□□□□□ -0.85
CLK4-212ENST00000522749 WASHC2CQ9Y4E1 1318 aa9.74□□□□□ -0.85
CLK4-212ENST00000522749 ERVK-7P63135 1459 aa9.73□□□□□ -0.85
CLK4-212ENST00000522749 KANK1Q14678 1352 aa9.73□□□□□ -0.85
CLK4-212ENST00000522749 ARHGAP31Q2M1Z3 1444 aa9.73□□□□□ -0.85
CLK4-212ENST00000522749 UHRF1BP1Q6BDS2 1440 aa9.73□□□□□ -0.85
CLK4-212ENST00000522749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.72□□□□□ -0.853e-8■■■■□ 20.2
CLK4-212ENST00000522749 RPRD2Q5VT52 1461 aaKnown RBP9.71□□□□□ -0.86
CLK4-212ENST00000522749 A2ML1A8K2U0 1454 aa9.7□□□□□ -0.86
CLK4-212ENST00000522749 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
CLK4-212ENST00000522749 TNRQ92752 1358 aa9.69□□□□□ -0.86
CLK4-212ENST00000522749 NLRP1Q9C000 1473 aa9.69□□□□□ -0.86
CLK4-212ENST00000522749 TMEM131LA2VDJ0 1609 aa9.68□□□□□ -0.86
CLK4-212ENST00000522749 CLTCL1P53675 1640 aa9.68□□□□□ -0.86
CLK4-212ENST00000522749 UGGT1Q9NYU2 1555 aa9.67□□□□□ -0.86
CLK4-212ENST00000522749 ADGRB3O60242 1522 aa9.67□□□□□ -0.86
CLK4-212ENST00000522749 NOS1P29475 1434 aa9.67□□□□□ -0.86
CLK4-212ENST00000522749 NUP155O75694 1391 aa9.67□□□□□ -0.86
CLK4-212ENST00000522749 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
CLK4-212ENST00000522749 NEURL4Q96JN8 1562 aa9.67□□□□□ -0.86
CLK4-212ENST00000522749 SETD5Q9C0A6 1442 aa9.66□□□□□ -0.86
CLK4-212ENST00000522749 IFT172Q9UG01 1749 aa9.66□□□□□ -0.86
CLK4-212ENST00000522749 TRPM2O94759 1503 aa9.66□□□□□ -0.86
CLK4-212ENST00000522749 PPLO60437 1756 aa9.65□□□□□ -0.86
CLK4-212ENST00000522749 HSPA2P54652 639 aa9.65□□□□□ -0.86
CLK4-212ENST00000522749 PLA2R1Q13018 1463 aa9.64□□□□□ -0.87
CLK4-212ENST00000522749 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
CLK4-212ENST00000522749 STRCP1A6NGW2 1772 aa9.63□□□□□ -0.87
CLK4-212ENST00000522749 SLIT1O75093 1534 aa9.62□□□□□ -0.87
CLK4-212ENST00000522749 PTPRTO14522 1441 aa9.61□□□□□ -0.87
CLK4-212ENST00000522749 XIRP1Q702N8 1843 aaKnown RBP9.61□□□□□ -0.87
CLK4-212ENST00000522749 ARHGAP23Q9P227 1491 aa9.6□□□□□ -0.87
CLK4-212ENST00000522749 TRIM52Q96A61 297 aa9.6□□□□□ -0.87
CLK4-212ENST00000522749 CHD2O14647 1828 aaKnown RBP9.6□□□□□ -0.87
CLK4-212ENST00000522749 SETD1AO15047 1707 aaKnown RBP9.59□□□□□ -0.87
CLK4-212ENST00000522749 NRXN3Q9Y4C0 1643 aa9.57□□□□□ -0.88
CLK4-212ENST00000522749 IDI1Q13907 227 aa9.57□□□□□ -0.88
CLK4-212ENST00000522749 MED14O60244 1454 aa9.57□□□□□ -0.88
CLK4-212ENST00000522749 SCAF11Q99590 1463 aaKnown RBP9.57□□□□□ -0.88
CLK4-212ENST00000522749 NEXMIFQ5QGS0 1516 aa9.56□□□□□ -0.88
CLK4-212ENST00000522749 PKD2Q13563 968 aa9.56□□□□□ -0.88
CLK4-212ENST00000522749 SLC4A1APQ9BWU0 796 aaKnown RBP9.56□□□□□ -0.88
CLK4-212ENST00000522749 SLC52A1Q9NWF4 448 aa9.56□□□□□ -0.88
CLK4-212ENST00000522749 ZFYVE9O95405 1425 aa9.56□□□□□ -0.88
CLK4-212ENST00000522749 NCKAP5LQ9HCH0 1330 aa9.56□□□□□ -0.88
CLK4-212ENST00000522749 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
CLK4-212ENST00000522749 THEMISQ8N1K5 641 aaPredicted RBP9.55□□□□□ -0.88
CLK4-212ENST00000522749 TMEM2Q9UHN6 1383 aa9.54□□□□□ -0.88
CLK4-212ENST00000522749 LTBP4Q8N2S1 1624 aa9.54□□□□□ -0.88
CLK4-212ENST00000522749 HRCP23327 699 aa9.54□□□□□ -0.88
CLK4-212ENST00000522749 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
CLK4-212ENST00000522749 FOXD1Q16676 465 aa9.54□□□□□ -0.88
CLK4-212ENST00000522749 MPHOSPH9Q99550 1183 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms