RNA–Protein interactions for RNA: ENST00000522327.1

UBR5-213, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 3

Gene UBR5, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-213ENST00000522327 PKD2Q13563 968 aa15.12■□□□□ 0.01
UBR5-213ENST00000522327 PIP4K2BP78356 416 aa15.11■□□□□ 0.01
UBR5-213ENST00000522327 PLA2R1Q13018 1463 aa15.11■□□□□ 0.01
UBR5-213ENST00000522327 ABCC1P33527 1531 aa15.09■□□□□ 0.01
UBR5-213ENST00000522327 SSUH2Q9Y2M2 353 aa15.09■□□□□ 0.01
UBR5-213ENST00000522327 ZMYM3Q14202 1370 aa15.09■□□□□ 0.01
UBR5-213ENST00000522327 PITPNM1O00562 1244 aa15.08■□□□□ 0
UBR5-213ENST00000522327 TCOF1Q13428 1488 aaKnown RBP15.08■□□□□ 0
UBR5-213ENST00000522327 CEP170BQ9Y4F5 1589 aaPredicted RBP15.06■□□□□ 0
UBR5-213ENST00000522327 MYO3AQ8NEV4 1616 aa15.06■□□□□ 0
UBR5-213ENST00000522327 MROH2AA6NES4 1674 aa15.06■□□□□ 0
UBR5-213ENST00000522327 TOM1O60784 492 aa15.05■□□□□ -0
UBR5-213ENST00000522327 ZNF142P52746 1687 aaPredicted RBP15.03■□□□□ -0
UBR5-213ENST00000522327 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
UBR5-213ENST00000522327 PREX2Q70Z35 1606 aa15.03■□□□□ -0
UBR5-213ENST00000522327 PTPRKQ15262 1439 aa15.01□□□□□ -0.01
UBR5-213ENST00000522327 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
UBR5-213ENST00000522327 CPS1P31327 1500 aa15.01□□□□□ -0.01
UBR5-213ENST00000522327 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
UBR5-213ENST00000522327 SPAG9O60271 1321 aaKnown RBP15□□□□□ -0.01
UBR5-213ENST00000522327 CDC42BPBQ9Y5S2 1711 aa15□□□□□ -0.01
UBR5-213ENST00000522327 SAMD9LQ8IVG5 1584 aa14.99□□□□□ -0.01
UBR5-213ENST00000522327 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
UBR5-213ENST00000522327 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
UBR5-213ENST00000522327 ZNF777Q9ULD5 760 aaPredicted RBP14.98□□□□□ -0.01
UBR5-213ENST00000522327 CLTCQ00610 1675 aaKnown RBP14.97□□□□□ -0.01
UBR5-213ENST00000522327 A2ML1A8K2U0 1454 aa14.97□□□□□ -0.01
UBR5-213ENST00000522327 GGT6Q6P531 493 aa14.97□□□□□ -0.01
UBR5-213ENST00000522327 SHANK2Q9UPX8 1470 aa14.96□□□□□ -0.01
UBR5-213ENST00000522327 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.02
UBR5-213ENST00000522327 A2MP01023 1474 aa14.95□□□□□ -0.02
UBR5-213ENST00000522327 ATP7AQ04656 1500 aa14.94□□□□□ -0.02
UBR5-213ENST00000522327 PIP4P2Q8N4L2 257 aa14.94□□□□□ -0.02
UBR5-213ENST00000522327 CLEC11AQ9Y240 323 aa14.94□□□□□ -0.02
UBR5-213ENST00000522327 SUPT6HQ7KZ85 1726 aaKnown RBP14.94□□□□□ -0.02
UBR5-213ENST00000522327 CCDC18Q5T9S5 1454 aa14.94□□□□□ -0.02
UBR5-213ENST00000522327 PLXNC1O60486 1568 aa14.94□□□□□ -0.02
UBR5-213ENST00000522327 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBR5-213ENST00000522327 HNRNPMP52272 730 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBR5-213ENST00000522327 DNMT1P26358 1616 aaKnown RBP14.92□□□□□ -0.02
UBR5-213ENST00000522327 NEURL4Q96JN8 1562 aa14.91□□□□□ -0.02
UBR5-213ENST00000522327 INO80Q9ULG1 1556 aaPredicted RBP14.9□□□□□ -0.02
UBR5-213ENST00000522327 TNRQ92752 1358 aa14.89□□□□□ -0.03
UBR5-213ENST00000522327 LRRIQ1Q96JM4 1722 aa14.89□□□□□ -0.03
UBR5-213ENST00000522327 ANKLE2Q86XL3 938 aa14.88□□□□□ -0.03
UBR5-213ENST00000522327 CASKIN1Q8WXD9 1431 aa14.88□□□□□ -0.03
UBR5-213ENST00000522327 PLEKHH2Q8IVE3 1493 aa14.88□□□□□ -0.03
UBR5-213ENST00000522327 CDC42BPAQ5VT25 1732 aa14.87□□□□□ -0.03
UBR5-213ENST00000522327 VWDEQ8N2E2 1590 aa14.87□□□□□ -0.03
UBR5-213ENST00000522327 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
UBR5-213ENST00000522327 ALKQ9UM73 1620 aa14.87□□□□□ -0.03
UBR5-213ENST00000522327 GPATCH8Q9UKJ3 1502 aaKnown RBP14.87□□□□□ -0.03
UBR5-213ENST00000522327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.86□□□□□ -0.03
UBR5-213ENST00000522327 POLR1AO95602 1720 aaPredicted RBP14.86□□□□□ -0.03
UBR5-213ENST00000522327 NPHP4O75161 1426 aaPredicted RBP14.85□□□□□ -0.03
UBR5-213ENST00000522327 CFDP1Q9UEE9 299 aaPredicted RBP14.85□□□□□ -0.03
UBR5-213ENST00000522327 FBXO31Q5XUX0 539 aaPredicted RBP14.84□□□□□ -0.03
UBR5-213ENST00000522327 THEMISQ8N1K5 641 aaPredicted RBP14.83□□□□□ -0.04
UBR5-213ENST00000522327 PZPP20742 1482 aa14.82□□□□□ -0.04
UBR5-213ENST00000522327 RGS17Q9UGC6 210 aaPredicted RBP14.82□□□□□ -0.04
UBR5-213ENST00000522327 CCNB3Q8WWL7 1395 aa14.82□□□□□ -0.04
UBR5-213ENST00000522327 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
UBR5-213ENST00000522327 RNF17Q9BXT8 1623 aaKnown RBP14.81□□□□□ -0.04
UBR5-213ENST00000522327 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
UBR5-213ENST00000522327 MED14O60244 1454 aa14.81□□□□□ -0.04
UBR5-213ENST00000522327 LRRC7Q96NW7 1537 aa14.81□□□□□ -0.04
UBR5-213ENST00000522327 FYCO1Q9BQS8 1478 aa14.8□□□□□ -0.04
UBR5-213ENST00000522327 NLRP1Q9C000 1473 aa14.8□□□□□ -0.04
UBR5-213ENST00000522327 KDM5DQ9BY66 1539 aa14.8□□□□□ -0.04
UBR5-213ENST00000522327 UGGT1Q9NYU2 1555 aa14.8□□□□□ -0.04
UBR5-213ENST00000522327 ADGBQ8N7X0 1667 aa14.79□□□□□ -0.04
UBR5-213ENST00000522327 SYNMO15061 1565 aa14.78□□□□□ -0.04
UBR5-213ENST00000522327 MIA2Q96PC5 1412 aa14.78□□□□□ -0.04
UBR5-213ENST00000522327 DHX29Q7Z478 1369 aaKnown RBP14.78□□□□□ -0.04
UBR5-213ENST00000522327 DEPDC5O75140 1603 aa14.77□□□□□ -0.04
UBR5-213ENST00000522327 WASHC2CQ9Y4E1 1318 aa14.77□□□□□ -0.04
UBR5-213ENST00000522327 KIF3BO15066 747 aa14.77□□□□□ -0.05
UBR5-213ENST00000522327 RTEL1-TNFRSF6BF6WH68 1400 aa14.75□□□□□ -0.05
UBR5-213ENST00000522327 IQGAP1P46940 1657 aa14.75□□□□□ -0.05
UBR5-213ENST00000522327 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
UBR5-213ENST00000522327 POTEAQ6S8J7 498 aa14.74□□□□□ -0.05
UBR5-213ENST00000522327 ZNF644Q9H582 1327 aaPredicted RBP14.73□□□□□ -0.05
UBR5-213ENST00000522327 MBD5Q9P267 1494 aa14.73□□□□□ -0.05
UBR5-213ENST00000522327 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
UBR5-213ENST00000522327 PRKAR2AP13861 404 aaKnown RBP14.72□□□□□ -0.05
UBR5-213ENST00000522327 STRCP1A6NGW2 1772 aa14.68□□□□□ -0.06
UBR5-213ENST00000522327 FAM135BQ49AJ0 1406 aa14.67□□□□□ -0.06
UBR5-213ENST00000522327 CCDC141Q6ZP82 1450 aa14.67□□□□□ -0.06
UBR5-213ENST00000522327 SCAF11Q99590 1463 aaKnown RBP14.67□□□□□ -0.06
UBR5-213ENST00000522327 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
UBR5-213ENST00000522327 HAX1O00165 279 aa14.65□□□□□ -0.06
UBR5-213ENST00000522327 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
UBR5-213ENST00000522327 ERVK-7P63135 1459 aa14.63□□□□□ -0.07
UBR5-213ENST00000522327 ZC3H13Q5T200 1668 aaKnown RBP14.63□□□□□ -0.07
UBR5-213ENST00000522327 ABCC3O15438 1527 aa14.62□□□□□ -0.07
UBR5-213ENST00000522327 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
UBR5-213ENST00000522327 SETD1AO15047 1707 aaKnown RBP14.61□□□□□ -0.07
UBR5-213ENST00000522327 TXNDC2Q86VQ3 553 aa14.61□□□□□ -0.07
UBR5-213ENST00000522327 TMEM94Q12767 1356 aa14.6□□□□□ -0.07
UBR5-213ENST00000522327 CEP162Q5TB80 1403 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms