RNA–Protein interactions for RNA: ENST00000522327.1

UBR5-213, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 3

Gene UBR5, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-213ENST00000522327 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
UBR5-213ENST00000522327 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
UBR5-213ENST00000522327 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
UBR5-213ENST00000522327 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
UBR5-213ENST00000522327 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
UBR5-213ENST00000522327 FOXD1Q16676 465 aa21.95■■□□□ 1.1
UBR5-213ENST00000522327 ABCC9O60706 1549 aa21.6■■□□□ 1.05
UBR5-213ENST00000522327 PLPPR3Q6T4P5 718 aa21.41■■□□□ 1.02
UBR5-213ENST00000522327 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
UBR5-213ENST00000522327 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
UBR5-213ENST00000522327 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
UBR5-213ENST00000522327 ADRA2BP18089 450 aa20.67■□□□□ 0.9
UBR5-213ENST00000522327 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
UBR5-213ENST00000522327 MSH5O43196 834 aa20.52■□□□□ 0.88
UBR5-213ENST00000522327 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
UBR5-213ENST00000522327 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
UBR5-213ENST00000522327 NACADO15069 1562 aa20.02■□□□□ 0.8
UBR5-213ENST00000522327 POTEDQ86YR6 584 aa19.94■□□□□ 0.78
UBR5-213ENST00000522327 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
UBR5-213ENST00000522327 BICRAQ9NZM4 1560 aa19.68■□□□□ 0.74
UBR5-213ENST00000522327 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
UBR5-213ENST00000522327 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
UBR5-213ENST00000522327 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
UBR5-213ENST00000522327 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
UBR5-213ENST00000522327 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
UBR5-213ENST00000522327 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
UBR5-213ENST00000522327 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
UBR5-213ENST00000522327 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
UBR5-213ENST00000522327 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
UBR5-213ENST00000522327 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
UBR5-213ENST00000522327 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
UBR5-213ENST00000522327 MAPK8IP2Q13387 824 aaPredicted RBP18.9■□□□□ 0.62
UBR5-213ENST00000522327 CUX2O14529 1486 aa18.84■□□□□ 0.61
UBR5-213ENST00000522327 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
UBR5-213ENST00000522327 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
UBR5-213ENST00000522327 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
UBR5-213ENST00000522327 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
UBR5-213ENST00000522327 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
UBR5-213ENST00000522327 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
UBR5-213ENST00000522327 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
UBR5-213ENST00000522327 NESP48681 1621 aa18.38■□□□□ 0.53
UBR5-213ENST00000522327 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
UBR5-213ENST00000522327 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
UBR5-213ENST00000522327 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
UBR5-213ENST00000522327 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
UBR5-213ENST00000522327 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
UBR5-213ENST00000522327 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
UBR5-213ENST00000522327 HOXD11P31277 338 aaPredicted RBP18.18■□□□□ 0.5
UBR5-213ENST00000522327 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
UBR5-213ENST00000522327 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
UBR5-213ENST00000522327 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
UBR5-213ENST00000522327 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
UBR5-213ENST00000522327 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
UBR5-213ENST00000522327 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
UBR5-213ENST00000522327 PEG3Q9GZU2 1588 aa18.01■□□□□ 0.47
UBR5-213ENST00000522327 MRC2Q9UBG0 1479 aa17.99■□□□□ 0.47
UBR5-213ENST00000522327 WDR62O43379 1518 aa17.93■□□□□ 0.46
UBR5-213ENST00000522327 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
UBR5-213ENST00000522327 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
UBR5-213ENST00000522327 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
UBR5-213ENST00000522327 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
UBR5-213ENST00000522327 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
UBR5-213ENST00000522327 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
UBR5-213ENST00000522327 KCNA4P22459 653 aa17.71■□□□□ 0.43
UBR5-213ENST00000522327 RIMBP3CA6NJZ7 1639 aa17.66■□□□□ 0.42
UBR5-213ENST00000522327 RIMBP3BA6NNM3 1639 aa17.66■□□□□ 0.42
UBR5-213ENST00000522327 RIMBP3Q9UFD9 1639 aa17.66■□□□□ 0.42
UBR5-213ENST00000522327 CFTRP13569 1480 aa17.61■□□□□ 0.41
UBR5-213ENST00000522327 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
UBR5-213ENST00000522327 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
UBR5-213ENST00000522327 WIZO95785 1651 aa17.59■□□□□ 0.41
UBR5-213ENST00000522327 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
UBR5-213ENST00000522327 CYB5RLQ6IPT4 315 aa17.51■□□□□ 0.39
UBR5-213ENST00000522327 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
UBR5-213ENST00000522327 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
UBR5-213ENST00000522327 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
UBR5-213ENST00000522327 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
UBR5-213ENST00000522327 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
UBR5-213ENST00000522327 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
UBR5-213ENST00000522327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.371e-7■□□□□ 8.3
UBR5-213ENST00000522327 EIF4G3O43432 1585 aaKnown RBP17.35■□□□□ 0.37
UBR5-213ENST00000522327 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
UBR5-213ENST00000522327 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
UBR5-213ENST00000522327 FBLN2P98095 1184 aa17.3■□□□□ 0.36
UBR5-213ENST00000522327 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
UBR5-213ENST00000522327 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.353e-7■■■■■ 32.3
UBR5-213ENST00000522327 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
UBR5-213ENST00000522327 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
UBR5-213ENST00000522327 CHD1O14646 1710 aa17.24■□□□□ 0.35
UBR5-213ENST00000522327 DNMBPQ6XZF7 1577 aa17.21■□□□□ 0.35
UBR5-213ENST00000522327 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
UBR5-213ENST00000522327 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
UBR5-213ENST00000522327 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
UBR5-213ENST00000522327 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
UBR5-213ENST00000522327 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
UBR5-213ENST00000522327 SNAPC4Q5SXM2 1469 aa17.09■□□□□ 0.33
UBR5-213ENST00000522327 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
UBR5-213ENST00000522327 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
UBR5-213ENST00000522327 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
UBR5-213ENST00000522327 SOGA1O94964 1423 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms