RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 KDM5DQ9BY66 1539 aa28.88■■■□□ 2.21
TOP1MT-216ENST00000522121 CAMSAP1Q5T5Y3 1602 aa28.87■■■□□ 2.21
TOP1MT-216ENST00000522121 MYO3AQ8NEV4 1616 aa28.86■■■□□ 2.21
TOP1MT-216ENST00000522121 CEP170BQ9Y4F5 1589 aaPredicted RBP28.83■■■□□ 2.21
TOP1MT-216ENST00000522121 ZNF142P52746 1687 aaPredicted RBP28.83■■■□□ 2.21
TOP1MT-216ENST00000522121 PZPP20742 1482 aa28.81■■■□□ 2.2
TOP1MT-216ENST00000522121 PKD2Q13563 968 aa28.8■■■□□ 2.2
TOP1MT-216ENST00000522121 FBXO31Q5XUX0 539 aaPredicted RBP28.8■■■□□ 2.2
TOP1MT-216ENST00000522121 PLA2R1Q13018 1463 aa28.79■■■□□ 2.2
TOP1MT-216ENST00000522121 TNRQ92752 1358 aa28.79■■■□□ 2.2
TOP1MT-216ENST00000522121 NCKAP5LQ9HCH0 1330 aa28.79■■■□□ 2.2
TOP1MT-216ENST00000522121 A2ML1A8K2U0 1454 aa28.78■■■□□ 2.2
TOP1MT-216ENST00000522121 PTPN23Q9H3S7 1636 aa28.77■■■□□ 2.2
TOP1MT-216ENST00000522121 FGD6Q6ZV73 1430 aa28.76■■■□□ 2.19
TOP1MT-216ENST00000522121 RNF17Q9BXT8 1623 aaKnown RBP28.75■■■□□ 2.19
TOP1MT-216ENST00000522121 EIF2AK4Q9P2K8 1649 aaKnown RBP28.75■■■□□ 2.19
TOP1MT-216ENST00000522121 DUOX2Q9NRD8 1548 aa28.74■■■□□ 2.19
TOP1MT-216ENST00000522121 SHANK2Q9UPX8 1470 aa28.74■■■□□ 2.19
TOP1MT-216ENST00000522121 ABCC5O15440 1437 aa28.74■■■□□ 2.19
TOP1MT-216ENST00000522121 KIF15Q9NS87 1388 aa28.72■■■□□ 2.19
TOP1MT-216ENST00000522121 TCOF1Q13428 1488 aaKnown RBP28.72■■■□□ 2.19
TOP1MT-216ENST00000522121 DAPK1P53355 1430 aa28.7■■■□□ 2.19
TOP1MT-216ENST00000522121 RRP7BPQ9NSQ0 103 aa28.7■■■□□ 2.18
TOP1MT-216ENST00000522121 DNMT1P26358 1616 aaKnown RBP28.69■■■□□ 2.18
TOP1MT-216ENST00000522121 ABCC3O15438 1527 aa28.69■■■□□ 2.18
TOP1MT-216ENST00000522121 CROCC2H7BZ55 1655 aa28.67■■■□□ 2.18
TOP1MT-216ENST00000522121 ZC3H13Q5T200 1668 aaKnown RBP28.67■■■□□ 2.18
TOP1MT-216ENST00000522121 NLRP1Q9C000 1473 aa28.66■■■□□ 2.18
TOP1MT-216ENST00000522121 ERBINQ96RT1 1412 aa28.66■■■□□ 2.18
TOP1MT-216ENST00000522121 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
TOP1MT-216ENST00000522121 THEMISQ8N1K5 641 aaPredicted RBP28.65■■■□□ 2.18
TOP1MT-216ENST00000522121 ANKRD30AQ9BXX3 1397 aa28.63■■■□□ 2.17
TOP1MT-216ENST00000522121 MROH1Q8NDA8 1641 aa28.62■■■□□ 2.17
TOP1MT-216ENST00000522121 CHIC2Q9UKJ5 165 aa28.62■■■□□ 2.17
TOP1MT-216ENST00000522121 ZNF335Q9H4Z2 1342 aaPredicted RBP28.61■■■□□ 2.17
TOP1MT-216ENST00000522121 IQSEC2Q5JU85 1478 aa28.59■■■□□ 2.17
TOP1MT-216ENST00000522121 UGGT1Q9NYU2 1555 aa28.59■■■□□ 2.17
TOP1MT-216ENST00000522121 ANKLE2Q86XL3 938 aa28.59■■■□□ 2.17
TOP1MT-216ENST00000522121 FAM50AQ14320 339 aaKnown RBP28.58■■■□□ 2.17
TOP1MT-216ENST00000522121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.58■■■□□ 2.171e-7■■■■□ 21.9
TOP1MT-216ENST00000522121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.58■■■□□ 2.17
TOP1MT-216ENST00000522121 SPATA31D1Q6ZQQ2 1576 aa28.58■■■□□ 2.17
TOP1MT-216ENST00000522121 ERVK-7P63135 1459 aa28.57■■■□□ 2.16
TOP1MT-216ENST00000522121 PRDM15P57071 1507 aaPredicted RBP28.56■■■□□ 2.16
TOP1MT-216ENST00000522121 KANK1Q14678 1352 aa28.56■■■□□ 2.16
TOP1MT-216ENST00000522121 CEP152O94986 1710 aa28.55■■■□□ 2.16
TOP1MT-216ENST00000522121 POLR1AO95602 1720 aaPredicted RBP28.52■■■□□ 2.16
TOP1MT-216ENST00000522121 ARHGAP31Q2M1Z3 1444 aa28.52■■■□□ 2.16
TOP1MT-216ENST00000522121 NEURL4Q96JN8 1562 aa28.49■■■□□ 2.15
TOP1MT-216ENST00000522121 ADGRL2O95490 1459 aa28.48■■■□□ 2.15
TOP1MT-216ENST00000522121 DEPDC5O75140 1603 aa28.48■■■□□ 2.15
TOP1MT-216ENST00000522121 NPHP4O75161 1426 aaPredicted RBP28.45■■■□□ 2.15
TOP1MT-216ENST00000522121 MED14O60244 1454 aa28.44■■■□□ 2.14
TOP1MT-216ENST00000522121 UBAP1LF5GYI3 381 aa28.41■■■□□ 2.14
TOP1MT-216ENST00000522121 LMTK2Q8IWU2 1503 aa28.41■■■□□ 2.14
TOP1MT-216ENST00000522121 CFAP65Q6ZU64 1925 aaKnown RBP28.4■■■□□ 2.14
TOP1MT-216ENST00000522121 ANKRD50Q9ULJ7 1429 aa28.4■■■□□ 2.14
TOP1MT-216ENST00000522121 VWDEQ8N2E2 1590 aa28.38■■■□□ 2.13
TOP1MT-216ENST00000522121 CPS1P31327 1500 aa28.38■■■□□ 2.13
TOP1MT-216ENST00000522121 UBR1Q8IWV7 1749 aa28.36■■■□□ 2.13
TOP1MT-216ENST00000522121 STAG3Q9UJ98 1225 aa28.36■■■□□ 2.13
TOP1MT-216ENST00000522121 IQGAP1P46940 1657 aa28.34■■■□□ 2.13
TOP1MT-216ENST00000522121 EID1Q9Y6B2 187 aa28.33■■■□□ 2.13
TOP1MT-216ENST00000522121 TXNDC2Q86VQ3 553 aa28.32■■■□□ 2.12
TOP1MT-216ENST00000522121 SCAF11Q99590 1463 aaKnown RBP28.32■■■□□ 2.12
TOP1MT-216ENST00000522121 SLIT1O75093 1534 aa28.3■■■□□ 2.12
TOP1MT-216ENST00000522121 EFCAB6Q5THR3 1501 aa28.3■■■□□ 2.12
TOP1MT-216ENST00000522121 ARHGAP23Q9P227 1491 aa28.3■■■□□ 2.12
TOP1MT-216ENST00000522121 PPARGC1BQ86YN6 1023 aaKnown RBP28.3■■■□□ 2.12
TOP1MT-216ENST00000522121 IDI1Q13907 227 aa28.29■■■□□ 2.12
TOP1MT-216ENST00000522121 ROCK1Q13464 1354 aa28.28■■■□□ 2.12
TOP1MT-216ENST00000522121 LTKP29376 864 aa28.28■■■□□ 2.12
TOP1MT-216ENST00000522121 PIK3C2BO00750 1634 aa28.28■■■□□ 2.12
TOP1MT-216ENST00000522121 NOS1P29475 1434 aa28.26■■■□□ 2.12
TOP1MT-216ENST00000522121 TMEM2Q9UHN6 1383 aa28.26■■■□□ 2.12
TOP1MT-216ENST00000522121 TOM1O60784 492 aa28.26■■■□□ 2.11
TOP1MT-216ENST00000522121 ITGAEP38570 1179 aa28.25■■■□□ 2.11
TOP1MT-216ENST00000522121 SLC52A1Q9NWF4 448 aa28.25■■■□□ 2.11
TOP1MT-216ENST00000522121 RPRD2Q5VT52 1461 aaKnown RBP28.25■■■□□ 2.11
TOP1MT-216ENST00000522121 SYNMO15061 1565 aa28.23■■■□□ 2.11
TOP1MT-216ENST00000522121 SCAF1Q9H7N4 1312 aaKnown RBP28.21■■■□□ 2.11
TOP1MT-216ENST00000522121 KDM5AP29375 1690 aaKnown RBP28.21■■■□□ 2.11
TOP1MT-216ENST00000522121 PIP4K2BP78356 416 aa28.19■■■□□ 2.1
TOP1MT-216ENST00000522121 DISP3Q9P2K9 1392 aa28.19■■■□□ 2.1
TOP1MT-216ENST00000522121 UNC13BO14795 1591 aa28.18■■■□□ 2.1
TOP1MT-216ENST00000522121 TET3O43151 1660 aa28.18■■■□□ 2.1
TOP1MT-216ENST00000522121 ADGRB3O60242 1522 aa28.15■■■□□ 2.1
TOP1MT-216ENST00000522121 LRRC7Q96NW7 1537 aa28.15■■■□□ 2.1
TOP1MT-216ENST00000522121 STRCP1A6NGW2 1772 aa28.11■■■□□ 2.09
TOP1MT-216ENST00000522121 GCC2Q8IWJ2 1684 aa28.11■■■□□ 2.09
TOP1MT-216ENST00000522121 NUP155O75694 1391 aa28.11■■■□□ 2.09
TOP1MT-216ENST00000522121 HDGFP51858 240 aaKnown RBP28.09■■■□□ 2.09
TOP1MT-216ENST00000522121 BCANQ96GW7 911 aa28.08■■■□□ 2.09
TOP1MT-216ENST00000522121 IQGAP3Q86VI3 1631 aa28.07■■■□□ 2.08
TOP1MT-216ENST00000522121 HSPA1LP34931 641 aa28.06■■■□□ 2.08
TOP1MT-216ENST00000522121 SLC26A8Q96RN1 970 aa28.06■■■□□ 2.08
TOP1MT-216ENST00000522121 RRBP1Q9P2E9 1410 aaKnown RBP28.05■■■□□ 2.08
TOP1MT-216ENST00000522121 CHGAP10645 457 aaKnown RBP28.04■■■□□ 2.08
TOP1MT-216ENST00000522121 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
TOP1MT-216ENST00000522121 E9PCH4 1651 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms