RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SHANK2Q9UPX8 1470 aa26.5■■□□□ 1.83
SQLE-205ENST00000521232 KDM5DQ9BY66 1539 aa26.49■■□□□ 1.83
SQLE-205ENST00000521232 DAPK1P53355 1430 aa26.48■■□□□ 1.83
SQLE-205ENST00000521232 CROCC2H7BZ55 1655 aa26.47■■□□□ 1.83
SQLE-205ENST00000521232 DNMT1P26358 1616 aaKnown RBP26.47■■□□□ 1.83
SQLE-205ENST00000521232 DUOX2Q9NRD8 1548 aa26.47■■□□□ 1.83
SQLE-205ENST00000521232 EIF2AK4Q9P2K8 1649 aaKnown RBP26.47■■□□□ 1.83
SQLE-205ENST00000521232 RNF17Q9BXT8 1623 aaKnown RBP26.46■■□□□ 1.83
SQLE-205ENST00000521232 KIF15Q9NS87 1388 aa26.44■■□□□ 1.82
SQLE-205ENST00000521232 FBXO31Q5XUX0 539 aaPredicted RBP26.43■■□□□ 1.82
SQLE-205ENST00000521232 RRP7BPQ9NSQ0 103 aa26.43■■□□□ 1.82
SQLE-205ENST00000521232 MYO3AQ8NEV4 1616 aa26.43■■□□□ 1.82
SQLE-205ENST00000521232 PZPP20742 1482 aa26.42■■□□□ 1.82
SQLE-205ENST00000521232 NCOA1Q15788 1441 aa26.42■■□□□ 1.82
SQLE-205ENST00000521232 ZNF142P52746 1687 aaPredicted RBP26.41■■□□□ 1.82
SQLE-205ENST00000521232 PTPRTO14522 1441 aa26.4■■□□□ 1.82
SQLE-205ENST00000521232 CAMSAP1Q5T5Y3 1602 aa26.39■■□□□ 1.82
SQLE-205ENST00000521232 CEP170BQ9Y4F5 1589 aaPredicted RBP26.39■■□□□ 1.82
SQLE-205ENST00000521232 ERBINQ96RT1 1412 aa26.39■■□□□ 1.81
SQLE-205ENST00000521232 FBXO41Q8TF61 875 aa26.38■■□□□ 1.81
SQLE-205ENST00000521232 CHIC2Q9UKJ5 165 aa26.38■■□□□ 1.81
SQLE-205ENST00000521232 MROH1Q8NDA8 1641 aa26.38■■□□□ 1.81
SQLE-205ENST00000521232 TNRQ92752 1358 aa26.37■■□□□ 1.81
SQLE-205ENST00000521232 ANKRD30AQ9BXX3 1397 aa26.37■■□□□ 1.81
SQLE-205ENST00000521232 FAM50AQ14320 339 aaKnown RBP26.37■■□□□ 1.81
SQLE-205ENST00000521232 ABCC3O15438 1527 aa26.37■■□□□ 1.81
SQLE-205ENST00000521232 ZC3H13Q5T200 1668 aaKnown RBP26.36■■□□□ 1.81
SQLE-205ENST00000521232 A2ML1A8K2U0 1454 aa26.36■■□□□ 1.81
SQLE-205ENST00000521232 CERKQ8TCT0 537 aa26.33■■□□□ 1.81
SQLE-205ENST00000521232 PLA2R1Q13018 1463 aa26.33■■□□□ 1.81
SQLE-205ENST00000521232 PKD2Q13563 968 aa26.32■■□□□ 1.8
SQLE-205ENST00000521232 NCKAP5LQ9HCH0 1330 aa26.32■■□□□ 1.8
SQLE-205ENST00000521232 ADGRL2O95490 1459 aa26.3■■□□□ 1.8
SQLE-205ENST00000521232 PRDM15P57071 1507 aaPredicted RBP26.29■■□□□ 1.8
SQLE-205ENST00000521232 CEP152O94986 1710 aa26.28■■□□□ 1.8
SQLE-205ENST00000521232 NLRP1Q9C000 1473 aa26.27■■□□□ 1.8
SQLE-205ENST00000521232 DEPDC5O75140 1603 aa26.27■■□□□ 1.8
SQLE-205ENST00000521232 SPATA31D1Q6ZQQ2 1576 aa26.26■■□□□ 1.79
SQLE-205ENST00000521232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.26■■□□□ 1.79
SQLE-205ENST00000521232 CFAP65Q6ZU64 1925 aaKnown RBP26.25■■□□□ 1.79
SQLE-205ENST00000521232 ARHGAP31Q2M1Z3 1444 aa26.24■■□□□ 1.79
SQLE-205ENST00000521232 PPARGC1BQ86YN6 1023 aaKnown RBP26.24■■□□□ 1.79
SQLE-205ENST00000521232 ERVK-7P63135 1459 aa26.23■■□□□ 1.79
SQLE-205ENST00000521232 THEMISQ8N1K5 641 aaPredicted RBP26.23■■□□□ 1.79
SQLE-205ENST00000521232 KANK1Q14678 1352 aa26.22■■□□□ 1.79
SQLE-205ENST00000521232 UGGT1Q9NYU2 1555 aa26.19■■□□□ 1.78
SQLE-205ENST00000521232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.19■■□□□ 1.788e-9■■■□□ 18.5
SQLE-205ENST00000521232 VWDEQ8N2E2 1590 aa26.18■■□□□ 1.78
SQLE-205ENST00000521232 ANKRD50Q9ULJ7 1429 aa26.18■■□□□ 1.78
SQLE-205ENST00000521232 LMTK2Q8IWU2 1503 aa26.18■■□□□ 1.78
SQLE-205ENST00000521232 LTBP4Q8N2S1 1624 aa26.17■■□□□ 1.78
SQLE-205ENST00000521232 ANKLE2Q86XL3 938 aa26.16■■□□□ 1.78
SQLE-205ENST00000521232 ROCK1Q13464 1354 aa26.15■■□□□ 1.78
SQLE-205ENST00000521232 POLR1AO95602 1720 aaPredicted RBP26.13■■□□□ 1.77
SQLE-205ENST00000521232 NEURL4Q96JN8 1562 aa26.11■■□□□ 1.77
SQLE-205ENST00000521232 ZNF335Q9H4Z2 1342 aaPredicted RBP26.11■■□□□ 1.77
SQLE-205ENST00000521232 MED14O60244 1454 aa26.07■■□□□ 1.76
SQLE-205ENST00000521232 ITGAEP38570 1179 aa26.07■■□□□ 1.76
SQLE-205ENST00000521232 UBR1Q8IWV7 1749 aa26.07■■□□□ 1.76
SQLE-205ENST00000521232 IQSEC2Q5JU85 1478 aa26.05■■□□□ 1.76
SQLE-205ENST00000521232 EFCAB6Q5THR3 1501 aa26.05■■□□□ 1.76
SQLE-205ENST00000521232 RRBP1Q9P2E9 1410 aaKnown RBP26.04■■□□□ 1.76
SQLE-205ENST00000521232 NPHP4O75161 1426 aaPredicted RBP26.03■■□□□ 1.76
SQLE-205ENST00000521232 NOS1P29475 1434 aa26.03■■□□□ 1.76
SQLE-205ENST00000521232 IDI1Q13907 227 aa26.02■■□□□ 1.76
SQLE-205ENST00000521232 UNC13BO14795 1591 aa26■■□□□ 1.75
SQLE-205ENST00000521232 RPRD2Q5VT52 1461 aaKnown RBP25.99■■□□□ 1.75
SQLE-205ENST00000521232 ARHGAP23Q9P227 1491 aa25.99■■□□□ 1.75
SQLE-205ENST00000521232 PIK3C2BO00750 1634 aa25.99■■□□□ 1.75
SQLE-205ENST00000521232 SYNMO15061 1565 aa25.99■■□□□ 1.75
SQLE-205ENST00000521232 SLIT1O75093 1534 aa25.98■■□□□ 1.75
SQLE-205ENST00000521232 SLC52A1Q9NWF4 448 aa25.98■■□□□ 1.75
SQLE-205ENST00000521232 TET3O43151 1660 aa25.98■■□□□ 1.75
SQLE-205ENST00000521232 LTKP29376 864 aa25.96■■□□□ 1.75
SQLE-205ENST00000521232 TXNDC2Q86VQ3 553 aa25.96■■□□□ 1.75
SQLE-205ENST00000521232 STAG3Q9UJ98 1225 aa25.96■■□□□ 1.75
SQLE-205ENST00000521232 KDM5AP29375 1690 aaKnown RBP25.96■■□□□ 1.75
SQLE-205ENST00000521232 IQGAP1P46940 1657 aa25.96■■□□□ 1.75
SQLE-205ENST00000521232 SCAF11Q99590 1463 aaKnown RBP25.94■■□□□ 1.74
SQLE-205ENST00000521232 TMEM2Q9UHN6 1383 aa25.94■■□□□ 1.74
SQLE-205ENST00000521232 GCC2Q8IWJ2 1684 aa25.93■■□□□ 1.74
SQLE-205ENST00000521232 EID1Q9Y6B2 187 aa25.93■■□□□ 1.74
SQLE-205ENST00000521232 NUP155O75694 1391 aa25.92■■□□□ 1.74
SQLE-205ENST00000521232 CPS1P31327 1500 aa25.91■■□□□ 1.74
SQLE-205ENST00000521232 IQGAP3Q86VI3 1631 aa25.91■■□□□ 1.74
SQLE-205ENST00000521232 E9PCH4 1651 aa25.87■■□□□ 1.73
SQLE-205ENST00000521232 ADGRB3O60242 1522 aa25.86■■□□□ 1.73
SQLE-205ENST00000521232 UBAP1LF5GYI3 381 aa25.84■■□□□ 1.73
SQLE-205ENST00000521232 NAIPQ13075 1403 aa25.83■■□□□ 1.73
SQLE-205ENST00000521232 STRCP1A6NGW2 1772 aa25.81■■□□□ 1.72
SQLE-205ENST00000521232 TMEM131LA2VDJ0 1609 aa25.78■■□□□ 1.72
SQLE-205ENST00000521232 MYO5BQ9ULV0 1848 aa25.77■■□□□ 1.72
SQLE-205ENST00000521232 HDGFP51858 240 aaKnown RBP25.76■■□□□ 1.71
SQLE-205ENST00000521232 LRRC7Q96NW7 1537 aa25.75■■□□□ 1.71
SQLE-205ENST00000521232 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
SQLE-205ENST00000521232 ZFYVE9O95405 1425 aa25.75■■□□□ 1.71
SQLE-205ENST00000521232 TOM1O60784 492 aa25.74■■□□□ 1.71
SQLE-205ENST00000521232 CHGAP10645 457 aaKnown RBP25.73■■□□□ 1.71
SQLE-205ENST00000521232 RIMS2Q9UQ26 1411 aa25.72■■□□□ 1.71
SQLE-205ENST00000521232 SLC26A8Q96RN1 970 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms